Cupriavidus gilardii: CR3_0016
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Entry
CR3_0016 CDS
T04050
Symbol
fadD
Name
(GenBank) long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cgd
Cupriavidus gilardii
Pathway
cgd00061
Fatty acid biosynthesis
cgd00071
Fatty acid degradation
cgd01100
Metabolic pathways
cgd01212
Fatty acid metabolism
cgd02024
Quorum sensing
cgd04146
Peroxisome
Module
cgd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cgd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CR3_0016 (fadD)
00071 Fatty acid degradation
CR3_0016 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CR3_0016 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
CR3_0016 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cgd01004
]
CR3_0016 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgd04147
]
CR3_0016 (fadD)
Enzymes [BR:
cgd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CR3_0016 (fadD)
Lipid biosynthesis proteins [BR:
cgd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CR3_0016 (fadD)
Exosome [BR:
cgd04147
]
Exosomal proteins
Exosomal proteins of breast milk
CR3_0016 (fadD)
Exosomal proteins of breast cancer cells
CR3_0016 (fadD)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ALD89276
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All DBs
Position
1:complement(20632..22419)
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AA seq
595 aa
AA seq
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MDREQSNPPASHDATSEAQFFDDLEARHRRIWPAGLPTAPVYPHGEVALGDYLRAWARRR
PAHPALIYYGTEVGYAELDDLSERCAALLASHGIGAGDRVAVMIGNCPQFHVVFYGILKL
GAVYVPVNPLFKEEELRYELNDSGATAIVVLDQLADMLMAVKSQTRIRTVFTTSQGEMLP
AQPTVPLPAGLDAPPRRIDGATDLMPAIRATAPIALPPVDLDALAALNYTGGTTGMPKGC
MHTQRDMVYTAAASYALTGGVDAARMAEGSDDVMLNFLPMFWIAGENLGLIYPIFSGATV
VVLARWDPVAVMAAIDRYRVNRTFVVVDNAVELMNHPELPRYDLRSLRHTRAASFIRKIT
PDIRRRWFELTGSVLAEGAWGMTETHTSDTFTTGMQHDDMDLRGRPVFVGLPVPGTRIKI
CDFDTGALLPIGAEGEIVVSTPSLFKGYWGRPDVDAEVFRDGWFRTGDIGAYDEDGYLHF
LGRRKEMLKVRGMSVFPSELEVLLSRHPAVLGSAVVGRPDRDKGQMPVAFIRLRPEHAAT
VNAELLHAWCREQMAVYKVPEIRIVDELPLTATGKVRKVELQARLEAEQAQSASQ
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgagcagtcgaacccaccggcatcgcatgacgccacgtccgaagcgcagttc
ttcgacgatctggaagcgcgccaccgccggatctggcccgccggcctgcctaccgcgccg
gtgtacccgcacggcgaggtcgcgctcggcgactacctgcgcgcgtgggcgcgccgccgg
cccgcgcatccggcgctgatctactacggcaccgaagtcggctacgccgagctcgacgat
ctcagcgagcgctgcgccgcgctgctggcctcgcacggcatcggcgcgggcgaccgcgtc
gcggtgatgatcggcaactgcccgcagttccacgtggtgttctacggcatcctgaagctc
ggcgcggtctacgtaccggtcaatccgctgttcaaggaagaagagctgcgctacgagctg
aacgattcgggcgcgaccgcgatcgtcgtgctggaccagctggcggacatgctgatggcg
gtcaagagccagacccgcatccgcacggtgttcaccaccagccagggcgagatgctgccg
gcgcagccgaccgtgccgctgcccgcgggactggacgcgccgccgcggcgcatcgatggc
gcgaccgacctgatgccggcgatccgcgcgacggcgccgatcgcgctgccgcccgtcgat
ctggacgcgctggccgcgctgaactacaccggcggcaccaccggcatgcccaagggctgc
atgcatacgcagcgcgacatggtctacacggccgcggcctcgtacgcgctgaccggcggg
gtcgacgcggcgcgcatggcggagggctccgacgacgtgatgctgaacttcctgccgatg
ttctggatcgccggcgagaacctggggctgatctatccgatcttcagcggcgccaccgtg
gtcgtgctggcgcgctgggacccggttgccgtcatggcggccatcgaccgctaccgtgtc
aaccgcaccttcgtcgtggtcgacaacgcggtcgaactgatgaaccacccggagctgccg
cgctacgacctgcgctcgctgcggcatacgcgcgcggcctcgttcatccgcaagatcacg
ccggacatccgccggcgctggttcgaactgaccggcagcgtgctggccgaaggcgcgtgg
ggcatgaccgagacgcataccagcgacaccttcaccaccggcatgcagcacgacgacatg
gacctgcgcgggcgcccggtgttcgtcgggctgccggtgcccggcacgcgcatcaagatc
tgcgacttcgacaccggcgcgctgctgccgatcggcgcggaaggcgagatcgtcgtcagc
acgccgtcgctgttcaagggctactgggggcggcctgacgtcgacgccgaagtctttcgc
gacggctggttccgcaccggcgatatcggcgcctatgacgaggacggctatctgcatttc
ctcggtcgccgcaaggagatgctgaaggtgcgcggcatgagcgtattcccgtcggagctc
gaggtgctgctgtcgcgccatcccgcggtgctgggctcggccgtggttggccggcccgac
cgcgacaaggggcagatgccggtggccttcatccggctgcggcccgaacacgccgccacg
gtcaacgccgaattgctgcatgcctggtgccgcgagcaaatggcggtctacaaggtgccg
gagatccgcatcgtcgacgaactgccgctgaccgcgaccggcaaggtgcgcaaggtcgag
ctgcaggcacggctggaggcggagcaggcgcagtcggcatcccaatga
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