Cupriavidus gilardii: CR3_0023
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Entry
CR3_0023 CDS
T04050
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
cgd
Cupriavidus gilardii
Pathway
cgd00550
Peptidoglycan biosynthesis
cgd01100
Metabolic pathways
cgd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cgd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CR3_0023 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CR3_0023 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cgd01011
]
CR3_0023 (mrdA)
Enzymes [BR:
cgd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CR3_0023 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
cgd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CR3_0023 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
FTSW_RODA_SPOVE
bDLD3
Ribosomal_L37ae
Motif
Other DBs
NCBI-ProteinID:
ALD89283
LinkDB
All DBs
Position
1:complement(33957..38231)
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AA seq
1424 aa
AA seq
DB search
MTEIRNVELELGRFRLRVAAAALFAVILFGLLFLRFFWLQWYKHDQYSAKAEDNRISVAP
IEPNRGIIMDRNGIVLARNYSAYTLEITPSKLTQSLDDTIDELSELIEIQPRDRRRFRRL
MEESRSFESLPIRSQLSDEEVARFSAQRFRFPGVDVRARLFRQYPMGESASHVVGYIGRI
SQRDQQRIEAMDEANDADPAKYDPRKDADNYKGTNYIGKIGIEQSYETELHGLTGIEEVE
VSAGGRPIRTLSTAPATPGNNLILSLDIRLQQLAEALFGDRRGALVAIEPATGDILAFVS
KPTFDPNLFVEGIDTATWNELNNSPNKPLLNRPLRGTYPPGSTYKPFMALAALATGKRTA
NWGMHDPGFFTLGNHTFRDDKPGGHGWVDMNSSIVASCDTYYYALARDMGVNAIHDFMKP
LGFGQLTGIDIEGESRGILPSTEWKRRAYRKPEQQKWYDGETISLGIGQGYNSFTILQLA
HATSILVNNGVVMKPHLVKAIEDAVTRQRRLTVPKESYRLPFKQSDIDVIKRAMVGVTHS
GTAAKVFAGAAYESAGKTGTAQTFSLSKGEKYNHHALAEHKRDHALYTAFAPADKPKIAL
ALIVENAGFGAAHAAPIARKVMDYYLLGKWPAELAEIAPPVSERAHGLPPVDTPSVFTTG
HTASIASASAMGNTLANEEGEGKPGAKDQHDAARDGGASAAAAAPDIDPQAIAPASAPLT
LGERMRQALGHARPPHDGAPPAPAAAPPPPGLHSVSRIPRPAGRRGAGRQRHALKEAQMD
RRRALSLIKSALTGFDKPLALIVFLLFATGIVALYSASIGVPGRVEDQLRNILLSYAVMW
VIAYLPTQTLMRVAVPLYTVGVALLIAVAMFGLIRKGARRWLNVGIVIQPSELMKIAMPL
MLAWYFQKRESALRWFDFIVAGLLLAVPVGLIAKQPDLGTALLVLAAGMYVIYFAGLSWK
LILPALAILVTLISALLFFEHDMCAPGVNWPVLHDYQQHRVCTLLDPTTDPLGKASTRSS
RSSRSVRGPDGQGLAQGHADPPRVHSREAHRLHLRGLLRGIRPGWQCRAAGAVPAADLPR
ALYRRERADPLLAAAGGRRHADLLYLCLRQHGHGQRHPADRRRAAAADQLRRHRAGHARH
GDRHPDEHLAAEAADPDLRKRRRARARLPRLHRRRARPDRLLQQRPQLGQRAGVAARRGA
GVPDLGLLDIALDHARLAALVEAGDDVLRPAVAGGRRPRVPLESLGVIARHAAADEVVGR
QRNLRLDMPALAGALIPAVGLLQRLRHQFAALVQFAPGELGMRHLVVGRLLQPTQRFLGF
RRGAVAAQQHHRVVELRQPVALPRRVGEVAQRGFECAGLVGGHRLPGQRLGGLGRAGCRH
RGLPPAKQDQCARGMTGEAAKGRHGELPAGSGFPASVGAGERGR
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaatccgcaacgtcgaactcgagctcggccgcttccgccttcgcgtggcggcc
gcggcgctgttcgccgtgatcctgttcggcctgctgttcctgcgcttcttctggctgcag
tggtacaagcacgaccagtattcggccaaggccgaggacaaccgcatctcggtggcgccg
atcgagccgaaccgcggcatcatcatggaccgcaacggcatcgtgctggcgcgaaactat
tccgcctacacgctggagatcacgccgtccaagctgacacagtcgctggacgacaccatc
gacgagctgtccgagctgatcgagatccagccgcgcgaccgccgccgctttcgccggctg
atggaggagtcgcgcagcttcgagagcctgccgatccgcagccagctgagcgacgaagag
gtggcgcgcttctccgcgcagcgcttccgcttccctggcgtcgatgtgcgggcgcggctg
ttccgccagtacccaatgggcgaatccgcctcgcacgtggtcggctatatcggccgcatc
tcgcagcgcgaccagcagcgcatcgaggcgatggacgaggccaacgacgccgatccggcc
aagtacgatccgcgcaaggacgccgacaactacaagggcaccaactacatcggcaagatc
ggcatcgagcagagctacgagaccgaactgcatgggctgaccggcatcgaggaggtcgag
gtcagcgccggcgggcggccgatccgcacgctgtcgaccgcgccggcgacgccgggcaac
aacctgatcctgtcgctcgacatccggctgcagcagctggccgaggcgctgttcggcgac
cgccgcggcgcgctggtggcgatcgagccggccaccggcgacatcctcgccttcgtctcc
aagccgaccttcgacccgaacctgttcgtcgagggcatcgacaccgccacctggaacgag
ctgaacaattccccgaacaagccgctgctgaaccgcccgctgcgcggcacctacccgccc
ggctcgacctacaagccgttcatggcgctggcggcgctggcgaccggcaagcgcaccgcg
aactggggcatgcacgaccccggcttcttcacgctgggcaaccacaccttccgcgacgac
aagccgggcggccacggctgggtcgacatgaacagctcgatcgtcgcgtcgtgcgacacc
tactactacgcgctggcgcgcgacatgggcgtcaacgcgatccacgacttcatgaagccg
cttggcttcggccagctgaccggcatcgacatcgagggcgaaagccgcggcatcctgccg
tcgaccgagtggaaacggcgcgcctaccgcaagcccgagcagcagaagtggtatgacggc
gaaaccatctcgctgggcatcggccagggctacaacagcttcacgatcctgcagctggcg
cacgcgacgtcgatcctggtcaacaacggcgtggtgatgaagccccacctggtcaaggcg
atcgaggacgcggtcacgcgccagcgccgcctgacggtgcccaaagaaagctaccgcctg
ccgttcaagcaatccgatatcgacgtgatcaagcgcgcgatggtcggcgtcacgcattcg
ggcaccgcggccaaggtatttgccggcgcggcctacgagtcggccggcaagaccggcacc
gcgcagaccttctcgctgagcaagggcgagaagtacaaccaccacgcgctggccgagcac
aagcgcgaccacgcgctgtacaccgccttcgcgcccgccgacaagccgaagatcgcactg
gcgctgatcgtcgagaacgccggcttcggcgcggcacacgcggcaccgatcgcgcgcaag
gtgatggactactacctgctcggcaaatggcccgccgaactggccgagatcgcgccgccg
gtctccgagcgcgcgcacggcctgccgccggtcgatacgcccagcgtgttcaccaccggc
cataccgccagcatcgccagcgccagcgcaatgggcaacacgctggccaacgaggaaggg
gaaggcaagccgggcgcgaaggatcagcacgacgcggcacgcgacggcggcgccagcgcg
gccgccgccgcgccggacatcgatccgcaggcgatcgcaccggcctccgcgccgctgacg
ctgggcgaacgcatgcgtcaggcgctcggccacgccaggccgccgcatgatggcgcgccg
ccggcgccggccgccgcgccgccgccgcccgggctccactccgtctcccgcatcccgcgc
ccggcaggccgccgcggcgccgggcgccaacgccacgcattgaaggaggcgcagatggat
cgcagacgcgccctgtccctgatcaagtccgcgctgaccggcttcgacaagccgctcgcg
ctgatcgtcttcctgctgtttgccaccggcatcgtcgcgctgtattcggcgtcgatcggc
gtaccgggccgcgtcgaggatcagctgcgcaatatcctgctgtcctacgcggtgatgtgg
gtgatcgcctatctgcccacgcagacgctgatgcgggtcgcggtgccgctctatacggtc
ggcgtcgcgctgctgatcgcggtggcgatgttcgggctgatccgcaagggagcgcgccgc
tggctcaacgtcggcatcgtgatccagccgtccgagctgatgaagatcgcgatgccgctg
atgctggcgtggtacttccagaagcgcgaaagcgcgctgcgctggttcgacttcatcgtc
gccggcctgctgctggcggtaccggtcgggctgatcgccaagcagccggatctgggcacc
gcactgctggtgctggccgccggcatgtacgtgatctacttcgccggcctgtcgtggaag
ctgatcctgccggcgctggcgatcctggtcacgctgatttccgcgctgctgttcttcgag
cacgatatgtgcgcaccgggtgtcaactggccggtgctgcacgactatcagcagcaccgg
gtctgcacactgctcgatccgaccaccgacccgctcggcaaggcttccacacgatccagt
cgatcatcgcgatcggttcgggggcctgatgggcaagggctggctcaagggcacgcagac
ccacctcgagttcattcccgagaagcacaccgacttcatcttcgcggtctactccgagga
attcggcctggttggcaatgccgtgctgctggtgctgtacctgctgctgatcttccgcgg
gctctatatcgccgcgaacgcgccgacccacttctcgcggctgctggcgggcgccgtcac
gctgatcttctttacctatgccttcgtcaacatgggcatggtcagcggcatcctgccgat
cgtcggcgtgccgctgccgctgatcagctacggcggcaccgcgctggtcacgctcggcat
ggggatcggcatcctgatgaacatctcgcggcagaagcggctgatccagacctgaggaag
cgccggcgcgctcgcgcgcgcttgccccgtctacatcgtcggcgcgcgcgacctgaccgt
ctgctccagcagcgaccgcagcttggccagcgcgccggggtcgccgcgcgccgcggcgcg
ggcgtaccagatcttggcctgctcgatatcgcgctcgaccacgcccggctcgccgcgctc
gtagaagctggcgacgatgtactgcgccccgccgtcgccggcggtcgccgcccgcgtgta
ccactcgaaagccttggcgtaatcgcgcggcacgccgcggccgatgaagtagttggtcgc
cagcgcaacctgcgcctggatatgcccgccctggccggcgcgctgataccagcggttggc
ctcctccagcgacttcggcaccagttcgccgcgctcgtgcagttcgccccaggtgaactg
ggcatgcgtcatctcgttgtcggccgccttcttcagccaactcagcgcttcctggggttt
cgacgcggtgccgtcgccgcgcagcagcatcatcgcgtagttgaactgcgccagccggtt
gccctgccgcgccgcgtcggcgaagtcgcgcagcgcggattcgaatgcgccggcctcgta
ggcggccaccgcctgccgggtcagcgtctcggcgggctgggccgggcggggtgccgccat
cgcggtctgccacccgccaagcaggatcagtgtgcacgcggcatgacaggcgaggcggcg
aagggacggcatggcgaactcccagcgggatcgggctttccagccagtgtaggagccggt
gaaagggggcgatag
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