Cupriavidus gilardii: CR3_0205
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Entry
CR3_0205 CDS
T04050
Symbol
sbcC
Name
(GenBank) putative Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cgd
Cupriavidus gilardii
Brite
KEGG Orthology (KO) [BR:
cgd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgd03400
]
CR3_0205 (sbcC)
DNA repair and recombination proteins [BR:
cgd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CR3_0205 (sbcC)
Archaeal homologous recombinant proteins
CR3_0205 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_22
ABC_ATPase
ABC_tran
AAA_21
RsgA_GTPase
nSTAND3
DUF87
Motif
Other DBs
NCBI-ProteinID:
ALD89464
UniProt:
A0A0M3SUV0
LinkDB
All DBs
Position
1:complement(259381..263169)
Genome browser
AA seq
1262 aa
AA seq
DB search
MRILAIRGRNLASLSGEFAIDFTAEPLASAGLFAICGPTGAGKSTLLDALCLALYDRTPR
VARVGGRDTVLPDVAGETIGAHDTRTLLRRGAAEGHAEVDFVGGDGQAYRARWSVRRARG
KAGGKLQQTQMSLARLPGEEPAGGGLKTEVQAAIVERVGLTFEQFTRAVLLAQNEFFAFL
KAGDDERAALLQALTGTGRFEAISRRAFERNKAEQEALRQLREQAAQHQPLDAETRAQCE
RQRRQQQDAVTALDERLRQYEAQLRWHADAADLARLEQQAIDRHRDAVAAHDAAAPRRAR
LADAHAAQPARALVAEIDRLAAQREAQRQELARAAEALAAAARAAQDAQAERQRAAAALE
AARHAEAAMAPRLAQARELDAVIAALSPDRERAALAHRQAGQALEETRRDQARLRTERES
AGSALAAAEDWLVRHAGLEALGTQWPRWDALFAQADDWHGRHAAATQEAARLAAQLARAQ
QDQTDAQGRLAAAAASLQDAQQQYAVAQQALAGHDRDAIAARAAELQRQRDALQQAAARW
RERLAAEARMAELVQQRDTLQAQWQQCRQGIDAARAARPAAEQAAAQAERSWQRALAACQ
QGVERLRETLEPGEPCPVCGASEHPYAHDDSPLRAALQATLGALEDEYRRCQQALARIDA
DERSAAALARSHGDALAQLDTRLAAARQQCDQAQREWQADAVAAQAEAVDAGERADWIAR
QLADADAQQRSAAELDTHLRALDRQVQAARLRLDAGQAEQTAAQGALQRAQALAAELALR
HGTANESAAATAAQRDQALRALDEGALRHAAGAGWRSQWHDDPAGLRTRCADDAGQWTRH
RDERDALRQRIVQLDGALAAATQAHERALDAHRKAAEALAFADTRLSGRRADREALFAGT
PDAGLTVDAIAARLAQAGADATARVDEAQRVSQAASEQLARQGTRAEQAQSQSEALDRQA
REAAARLEAWLQGWNDRHDGSSAAAPLDEAGLRALLALDADWLAREEASLHALQREVDAA
HGAVQTRRAERERHLARRPGQDDAATVQAALAAARAELEGAKQALAEADFTLRRDDERRA
QARDLVTRIERQQATAHTWQVLNELIGSADGKKFRNHAQQMTLDILLGYANRHLATLSRR
YRLERVRQSLALLVIDQDMADEARSVHSLSGGESFLVSLALALGLASLSSHRVRVESLFI
DEGFGSLDGDTLRVAMDALDSLQAQGRKVGVISHVHEMTERIGTRIEVRRLSGGQSRVTV
GA
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcctcgccattcgcggccgcaacctggcctcgctgtccggcgagttcgccatc
gacttcacggccgaaccgctggcctcggcgggcctgttcgcgatctgcgggcccaccggc
gcgggcaagagcacgctgctcgatgccctgtgcctggcgttgtatgaccgcaccccgcgc
gtcgcgcgtgtcggcggccgcgacacggtgctgcccgacgtcgcgggcgagaccatcggc
gcgcacgacacgcgcacgctgctgcgccgcggcgccgccgaggggcacgccgaggtcgac
ttcgtcggcggcgacggccaggcctaccgcgcccgctggagcgtgcgccgggcccgcggc
aaggccggcggcaagcttcagcagacgcagatgtcgctggcacggctgcccggcgaggaa
ccggccggcggcggactgaagaccgaggtccaggccgccatcgtcgagcgcgtcggtctg
accttcgagcaattcacgcgcgcggtgctgctggcacagaacgagttcttcgccttcctg
aaggctggcgacgacgaacgcgcggcgctgctgcaggcgctgaccggcaccggccgcttc
gaggcgatctcgcggcgcgcgttcgaacgcaacaaggccgagcaggaagcgctgcgccag
ttgcgcgagcaggcagcgcagcaccagccgctggacgccgaaacgcgcgcgcagtgcgag
cggcaacggcggcagcagcaggacgcggtcacggcgctggacgaacggctgcggcaatac
gaggcgcaattgcgctggcacgccgatgcggccgacctcgccaggctcgaacaacaggcg
atcgaccggcatcgagacgccgtcgccgcccacgatgccgccgcgccacggcgcgcccgt
ctggccgacgcgcacgcggcccagcccgcgcgcgcgctggtggccgagatcgaccggctc
gccgcacagcgcgaagcgcagcgccaggagctcgcgcgcgcggccgaagcgctggccgcg
gccgcgcgtgcggcgcaggacgcgcaggccgaacggcagcgcgccgccgccgcgctggag
gcggcgcgccacgccgaggccgcgatggcgccgcgcctggcgcaggcacgcgaactcgat
gccgtgatcgcggcgttgagcccggaccgcgagcgcgcggcgcttgcgcatcggcaagcc
gggcaggcgctggaagaaacgcgccgcgatcaggcgcggttgcggaccgagcgcgaatcc
gccggctcggcgctggccgcggccgaggactggctcgtccggcatgccgggctcgaagcc
ctaggcacgcaatggccgcgctgggacgcgctgtttgcgcaggccgacgattggcacggc
cggcacgccgccgccacgcaagaggccgcgcgactggcagcgcagctcgccagggcacaa
caggaccagaccgatgctcaggggcggcttgcggccgccgccgcgtcgctgcaagacgcg
cagcagcaatacgcggtcgcgcagcaggcgctggccggtcacgaccgcgatgccatcgcc
gcgcgagccgccgaattgcagcggcaacgcgacgcgctgcagcaggcagcggcgcgctgg
cgcgaacgcctcgccgccgaagcgcgcatggccgagctggtccagcagcgcgacacgctg
caggcgcaatggcagcagtgccggcaaggcatcgacgcggcccgcgccgcacggcccgcc
gccgagcaggcggcggcgcaggcggaacgctcgtggcaacgcgcgctggccgcctgccag
caaggcgtcgagcggttgcgcgagacgctggagcccggcgagccctgcccggtctgcggc
gccagcgagcacccctacgcgcatgacgattcgccgctgcgcgcggcgctgcaggccacg
ctgggcgcgctggaggacgagtaccgccgttgccagcaggcgctggcgcggatcgacgcc
gacgagcgcagcgccgccgcattggcgcgcagccacggcgacgcgctggcgcagctcgac
acgcgcctcgccgcggcgaggcagcagtgcgaccaggcgcagcgtgaatggcaagccgac
gcagtggctgcgcaggccgaagcggtcgatgccggcgaacgcgcggactggattgcgcgg
caactggccgacgccgatgcacagcagcgcagcgcggccgagctcgacacccatctgcgc
gcgctcgacaggcaagtgcaggccgcacgccttcgcctcgatgccggccaggccgagcag
accgcggcccaaggcgcgctgcaacgcgcgcaggcgctggccgccgaactcgccttgcgg
catggcacggccaacgagtcggccgccgcaacggcggcgcagcgcgaccaggccttgcgg
gcactggacgagggcgcgctgcggcatgccgcgggcgccggctggcgcagccagtggcac
gacgatcctgcgggattgcgcacgcgctgcgcggacgatgccggccaatggacgcggcat
cgcgacgaacgcgacgcgctacgccagcgcatcgtccagctcgatggcgcgctggccgcc
gccacgcaggcgcacgagcgcgcgctcgacgcgcatcgcaaggccgccgaggcgctggcg
ttcgccgacacgcggctgtccggacggcgcgccgatcgcgaggcgctgtttgccggcacg
cccgacgcgggcctgacggtcgacgcgatcgcggcccgtctggcgcaagccggtgccgac
gccacggcgcgcgtcgacgaggcgcagcgcgtgagccaggcggccagcgaacaactggcg
cggcagggcacgcgcgccgaacaggcgcagtcccaaagcgaggcgctggaccggcaggcg
cgcgaagcggcggcgcggctcgaggcctggctgcagggctggaacgaccggcacgatggc
tcgtcagcggctgcgccgctcgacgaagccggcctgcgcgcgctgctggcgctcgatgcc
gattggctggcgcgcgaggaagcgtcgctgcacgcgctgcaacgcgaagtcgatgcggcg
cacggcgcggtgcagacgcgccgcgccgaacgcgaacgccatctggcgcggcggcctggg
caggacgacgccgccaccgtgcaagccgcactggcggcggcccgtgccgaactcgagggc
gccaagcaggcgctggccgaggccgatttcacgctgcgccgcgacgacgagcggcgcgcg
caggccagagatctggtcacgcgcatcgagcggcagcaggccacggcgcacacctggcag
gtcttgaacgaactgatcggctcggccgacggcaagaaattccgcaatcatgcccagcag
atgacgctggacatcctgctcggctatgccaaccggcatctggccacgctgtcgcgccgc
taccggctcgagcgcgtgcgacagagcctggcgctgctggtgatcgaccaggacatggcc
gacgaggcccgctcggtgcattcgctgtccggcggcgagtcgttcctggtatcgctcgcg
ctggcgctggggctggcatcgctgtcctcgcatcgcgtgcgcgtcgaatcgctgttcatc
gacgagggcttcggcagcctggacggcgacacgctgcgcgtcgcgatggacgcgctcgac
agcctgcaggcccagggccgcaaggtcggcgtgatctcgcacgtgcacgagatgaccgag
cgcatcggcacgcgcatcgaggtgcgccggctgtcgggcggtcagagccgggtgaccgtg
ggggcgtag
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