Cupriavidus gilardii: CR3_0231
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Entry
CR3_0231 CDS
T04050
Symbol
uvrD
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgd
Cupriavidus gilardii
Pathway
cgd03420
Nucleotide excision repair
cgd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CR3_0231 (uvrD)
03430 Mismatch repair
CR3_0231 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgd03400
]
CR3_0231 (uvrD)
Enzymes [BR:
cgd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CR3_0231 (uvrD)
DNA repair and recombination proteins [BR:
cgd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CR3_0231 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CR3_0231 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
RecR_HhH
HHH
HHH_5
AAA_12
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
ALD89489
LinkDB
All DBs
Position
1:complement(297204..299321)
Genome browser
AA seq
705 aa
AA seq
DB search
MSVDLALAPAAAQSDPADPVDYLAALNPEQREAVEHPTDQPLLIIAGAGSGKTNTLAHRV
AHLLLGGADPRRILLLTFSRRAAVEMGRRVERIVDQAFAARNGTTSSANPGRAALQWAGT
FHAIGARLLREYAETLGLSPSFTISDRGDSADLINVVRHDLGLSAQNARFPRKETCLAIY
SRVVNTQLPLEEVLQRQFPRYAMWVDALRTLFAGYVEAKQKQQVLDYDDLLLYWAQALAE
PALARDMGERFDHVLVDEYQDTNALQAAILLSLKPDGRGLTVVGDDAQSIYAFRGATVRN
ILDFPHRFSPPAGQVTLSRNYRSTQPILAAANAVIGLAAERFTKDLWSDRASAEKPDVVV
VNDETEQARFVVERILARREEGLALMAQAVLFRAADHSAQLELELVRRNIPFVKFGGLKF
LESTHVKDMLAVLRWLENPRDRMAGFRTLQLMPGVGPKTAARVLDGLELASDPLFALESF
EAPAAAAHAWTELVALAREAMAPAAAWPVDFERVLRWYEPHLERLHDDAAARAADLQQLA
RIAATYGSRERFLTELTLDPPDASSDESGVPLRDEDYLILSTIHSAKGQEWKAVYVLNAV
DGCLPSDLATGTTEEIEEERRLLYVAMTRARDHLDIVVPQRFYVHQQPGMGDRHVYASRT
RFLPNRVMPHFHSRAWPPPPPVDAAPQRASLPAVDLAARMRNMWR
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgtcgatcttgccctcgctcctgccgccgcccagtccgacccggctgacccggtc
gactatctcgccgcgctcaatcccgagcagcgtgaagcggtcgagcacccgaccgaccag
ccgctgctgatcatcgccggcgcaggctcgggcaagaccaatacgctggcgcaccgcgtc
gcgcatctgctgctgggcggcgccgatccgcgccgcatcctgctgctgacgttctctcgg
cgcgccgcggtcgagatgggccggcgtgtcgaacgcatcgtcgaccaggccttcgccgcc
cgcaacggcaccacctcgtcggccaatcccggccgcgccgcgctgcaatgggccggcacc
ttccacgcgatcggcgcgcgcctgctgcgcgaatacgcggaaacgctgggcctgtcgccc
tccttcacgatcagcgaccgcggcgattcggccgacctgatcaacgtggtgcggcacgac
ctcggcctgtcggcgcagaacgcgcgcttcccccggaaggaaacctgcctggcgatctat
tcgcgcgtggtcaacacgcagttgccgctcgaagaggtgctgcagcggcagttcccccgc
tacgcgatgtgggtcgatgcgctgcgcacgctgttcgccggctatgtcgaggccaagcag
aagcagcaggtgctcgactacgacgacctgctgctgtactgggcgcaggcgctggccgag
ccggcgctggcgcgcgacatgggcgagcgcttcgaccacgtgctggtcgacgaataccag
gacaccaatgcgctgcaggcggcgatcctgctgtcgctcaagcccgacggccgcggcctg
accgtcgtcggcgacgatgcgcaatcgatctacgcgttccgcggcgccaccgtgcgcaac
atcctcgacttcccgcaccgcttctcgccgccggcgggacaggtcacgctgtcgcgcaac
taccgctcgacgcagccgatcctggccgcggccaacgcggtgatcgggctggccgccgag
cgctttaccaaggacctgtggtccgaccgcgccagcgccgagaagccggacgtggtggtg
gtcaacgacgagaccgagcaggcgcgcttcgtggtcgagcgcatcctggcgcggcgcgag
gaagggctggcgctgatggcgcaggcggtgctgttccgcgccgccgaccacagcgcgcag
ctcgaactggagctggtccgccgcaacatcccgttcgtcaagttcggcgggctcaaattc
ctggagtcgacccacgtcaaggacatgctcgcggtgctgcgctggctggagaatccgcgc
gaccgcatggcgggctttcgcacgctgcagctgatgccgggtgtcggaccgaagaccgcg
gcgcgcgtgctcgacgggctggagctcgccagcgatccgctgttcgcgctcgaatcgttc
gaagcgccggcggccgccgcgcacgcctggacggaactggtcgcgctggcgcgcgaggcg
atggcgccggcggcggcgtggccggtcgacttcgagcgcgtgctgcgctggtacgaaccg
catctggagcggctgcacgacgatgccgccgcgcgtgccgccgacctgcagcagctggcg
cgcatcgccgcgacctacggctcgcgcgaacgcttcctgaccgagctgacgctggacccg
cccgacgcctccagcgacgaatcgggcgtgccgctgcgcgacgaggactacctgatcctg
tcgacgatccattcggccaagggccaggagtggaaggcggtctacgtgctgaacgcggtc
gacggctgcctgccctccgacctggccaccggcaccaccgaggagatcgaggaggagcgc
cggctgctctatgtcgcgatgacccgcgcgcgcgaccatctcgacatcgtggtgccgcag
cgcttctacgtgcaccagcagcccggcatgggcgaccgccacgtgtatgcgtcgcgcacg
cgcttcctgcccaatcgcgtgatgccgcatttccacagccgcgcgtggccgccgcctccg
ccggtcgatgcggcgccccagcgcgcctcgctgccggcggtcgacctcgccgcgcggatg
cgcaatatgtggcgatga
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