Cupriavidus gilardii: CR3_0730
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Entry
CR3_0730 CDS
T04050
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cgd
Cupriavidus gilardii
Pathway
cgd03030
DNA replication
cgd03430
Mismatch repair
cgd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CR3_0730 (dnaE)
03430 Mismatch repair
CR3_0730 (dnaE)
03440 Homologous recombination
CR3_0730 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgd03032
]
CR3_0730 (dnaE)
03400 DNA repair and recombination proteins [BR:
cgd03400
]
CR3_0730 (dnaE)
Enzymes [BR:
cgd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CR3_0730 (dnaE)
DNA replication proteins [BR:
cgd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CR3_0730 (dnaE)
DNA repair and recombination proteins [BR:
cgd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CR3_0730 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Ski2_N
Motif
Other DBs
NCBI-ProteinID:
ALD89981
LinkDB
All DBs
Position
1:877732..881253
Genome browser
AA seq
1173 aa
AA seq
DB search
MAPMSSPRFVHLRLHSEYSIVDGIVRLEDAVKAAAADGMGALALTDLANAFGLIRFYKEA
RGGGVKPIVGADVWLTNADDRDKPARMLLLVQDRRGYLNLCVLLSRAWLSNQYRGRAELE
PGWFEEPGEDGLPLSSGLIALSGAMGGDVGQALANGNEAAAQRAARHWATVFPQRYYIEL
QRAGHPGTEAYVQRAVQLAAALQLPVVATHPVQFMTPDDHTAHEARVCIAEGELLANPRR
ARRFTTDQYFKTQDEMSALFADIPSALENAVQIARRCNLTLELGKPRLPLFPTPDGMSLD
DYLVHMSKEGLERRLEVLFPDEATREAKRPEYYARLEFETGIIIKMGFPGYFLIVADFIN
WAKNNGVPVGPGRGSGAGSLVAYALGITDLDPLKYALLFERFLNPERVSMPDFDIDFCQH
GRDRVIQYVKEKYGKDAVSQIATFGTMAAKAAVRDVGRVLDLGYNFVDGVAKLIPFKPGK
LVTIEEAKKEEPLLTERENNEEEVRQLLELAQRVEGMTRNVGMHAGGVLIAPGKLTDFCP
LYTQGGQNDGMSGVVSQYDKDDVEAAGLVKFDFLGLTTLTILDWAERYIRRLDPGKADWN
CSQIPLDDPAAFDILKSANTVAVFQLESRGMQGMLKDAKPDRFEDIIALVSLYRPGPMDL
IPSFCARKHGREKVEYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAM
GKKKPEEMAKHRELFREGAAKNGLSADKADEIFDLMEKFAGYGFNKSHAAAYALLAYYTA
WLKAHHPAEFMAANMSLAMDDTDKVKILYEDCRANGLRVLPPDVNASEYRFAPTDAKTIR
YGLGGIKGSGQGAIEDILRAREERPFTDLFDFCERVDRRQVNRRTIEALIRAGAFDTLHP
NRAQLLASVPRAMEAAEQKAESANQVSLFDLMADDGDAHRPELIDEPAWTPKRMLQEEKQ
ALGYYFSGHLFDAYRDEVRRFVKGTLAALEKEVQGNGGGYGRDVRGKMVAGVITGIRTQM
TQRGKMLIVLLDDGTGQIEMTVFNELFDANRHMFREDELLIAQGNARHDTFTGGVRFTAE
TVMDLTTARIRHARALKLSLNGNSSTAMLRELLTPHLAQSAGGAGLPVCIQYASASAVCE
AVLGQAWQVVPSDDTLAALRAALSPECVSTLYE
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccatgtcttcgccccgcttcgtacatctccgtctccattccgaatactcgatc
gtcgacggcatcgtccgcctcgaggatgcggtcaaggccgccgccgccgatggcatgggc
gcgctcgcgctgaccgacctggccaatgccttcggcctgatccgcttctacaaggaggcg
cgcggcggcggcgtcaagccgatcgtcggcgcggacgtctggctgaccaacgccgacgat
cgcgacaagcccgcgcgcatgctgctgctggtgcaggaccggcgcggctatctgaacctg
tgcgtgctgctgtcgcgcgcctggctgtcgaaccagtaccgcggccgcgccgagctcgag
ccggggtggttcgaggaacccggcgaggacggcctgccgctgtcgagcggcctgatcgcg
ctgtccggcgcgatgggcggcgacgtcggccaggcgctggccaacggcaacgaggcggcc
gctcagcgcgccgcgcggcactgggcgaccgtgttcccgcagcgctattacatcgagctg
cagcgcgccggccatcctggcaccgaggcctatgtgcaacgcgcggtgcagctggccgcg
gcgctgcagctgccggtggtcgcgacgcatccggtccagttcatgacccccgacgaccat
accgcgcacgaggcgcgcgtctgtatcgccgagggcgagctgctggccaatccgcgccgc
gcgcgccgcttcaccaccgaccagtatttcaagacgcaggacgagatgtccgcgttgttc
gccgacatcccgtcggcgctcgagaacgcggtgcagatcgcgcgccgctgcaacctgacg
ctcgagctcggcaagccgcgcctgccgctgttcccgacgccggacggcatgtcgctggac
gactatctggtgcacatgtcgaaggaagggctggagcgccgtctcgaagtgctgttcccc
gacgaggcgacgcgcgaggccaagcgtcccgagtactacgcgcggctcgagttcgagacc
ggcatcatcatcaagatggggttccccggctacttcctgatcgtggccgacttcatcaac
tgggccaagaacaacggcgtgccggtcggtccggggcgcggctcgggcgccggctcgctg
gtcgcctacgcactgggcatcaccgacctcgatccgctgaaatacgcgctgctgttcgag
cgtttcctgaatccggagcgggtgtcgatgcccgacttcgatatcgacttctgccagcac
ggccgcgatcgcgtgatccagtacgtcaaggagaagtacggcaaggacgcggtgtcgcag
atcgccaccttcggcaccatggcggccaaggccgcggtgcgcgacgtcggccgcgtgctc
gatctgggctacaacttcgtcgacggcgtggccaagctgatcccgttcaagcccggcaag
ctggtgacgatcgaggaggccaagaaggaagagccgctgctgaccgagcgcgagaacaac
gaggaggaagtgcgccagctgctcgagctggcgcagcgcgtcgaaggcatgacccgcaac
gtcggcatgcacgccggcggcgtgctgatcgcgccgggcaagctgacggacttctgtccg
ctgtacacgcagggcggccagaacgacggcatgagcggcgtggtcagccagtacgacaag
gacgacgtcgaggccgccggcctggtcaagttcgactttctgggcctgaccacgctgacg
atcctcgactgggccgagcgctatatccgccggctcgatccgggcaaggccgactggaac
tgcagccagatcccgctcgacgatccggccgccttcgacatcctgaagtccgccaacacg
gtggcggtgttccagctggaaagccgcggcatgcagggcatgctcaaggacgccaagccc
gaccgcttcgaggacatcatcgcgctggtgtcgctgtaccgcccgggtccgatggacctg
atccccagtttctgcgcgcgcaagcacgggcgcgagaaggtggaatatccggacccgcgc
gtcgaacccgtcctgaaagagacctacggcatcatggtctatcaggagcaggtgatgcag
atggcgcagatcatcggcggctactcgctcggtggcgccgacctgctgcgccgcgcgatg
ggcaagaagaagcccgaggagatggccaagcatcgcgagctgttccgcgagggcgccgcg
aagaacgggctgtcggccgacaaggcggacgagatcttcgacctgatggagaagttcgcc
ggctacggcttcaacaagtcgcacgcggccgcctatgccttgctggcctactacaccgca
tggctgaaggcgcatcatccggccgaattcatggcggccaacatgtcgctggcgatggac
gacaccgacaaggtcaagatcctctacgaggattgccgcgccaacgggctgcgcgtgctg
ccgccggacgtcaatgccagcgaataccgtttcgccccgaccgatgcgaagacgatccgc
tacggactgggcggcatcaagggctcgggccagggcgcgatcgaggacatcctgcgcgcg
cgcgaggaacggccctttaccgacctgttcgacttctgcgagcgtgtcgaccgccgccag
gtcaaccgccgcacgatcgaggcgctgatccgcgccggcgccttcgacacgctgcatccg
aaccgcgcccagctgctggcctcggtgccgcgcgcgatggaggcggccgagcagaaggcc
gaatcggccaaccaggtgtcgctgttcgacctgatggccgacgacggcgacgcgcaccgt
cccgagctgatcgacgagccggcgtggacgcccaagcgcatgctgcaggaagaaaagcag
gcgctcggctactacttctccggccacctgttcgatgcctatcgcgacgaggtgcggcgc
ttcgtcaagggcacgctggccgcgctggaaaaggaagtgcagggcaacggcggcggctat
ggccgcgacgtgcgcggcaagatggtcgccggcgtgatcaccggcatccgcacccagatg
acccagcgcggcaagatgctgatcgtgctgctcgacgacggcaccggacagatcgagatg
acggtgttcaacgagctgttcgacgccaaccggcacatgttccgcgaggacgaactgctg
atcgcgcagggcaatgcgcgccacgacaccttcaccggcggcgtgcgcttcaccgcggaa
acggtgatggatctgaccactgcccgcatccgccatgcgcgcgcgctgaagctgtcgctg
aacggcaattcgtcgaccgcgatgctgcgcgaactgctgaccccgcatctggcgcaatcc
gccggcggcgcgggcttgccggtctgcatccagtacgcgagcgcctcggcggtctgcgag
gcggtgctgggccaggcctggcaggtggtgccgtcggacgacacgctggcggcgctgcgc
gcggcgctgtcgccggagtgcgtcagtacgctgtacgagtga
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