KEGG   Cupriavidus gilardii: CR3_1003
Entry
CR3_1003          CDS       T04050                                 
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
  KO
K01247  DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
cgd  Cupriavidus gilardii
Pathway
cgd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cgd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CR3_1003 (alkA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cgd03400]
    CR3_1003 (alkA)
Enzymes [BR:cgd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     CR3_1003 (alkA)
DNA repair and recombination proteins [BR:cgd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CR3_1003 (alkA)
SSDB
Motif
Pfam: HhH-GPD AF1548-like_C
Other DBs
NCBI-ProteinID: ALD90248
LinkDB
Position
1:1188932..1189660
AA seq 242 aa
MVTKADGKPALKTARAGKTTLPEAAAIPLPVETVEGAVRPAYWDEACADLMKRDRILRKM
IPTYGPAHLISRGDPFITLARSIVGQQISVKAAQSVWDRLAAACPKLTPAQLLRAGVDKL
AACGLSRRKAEYIVDLADHFKAGRVHVDKWAEMDDEAVIAELTQIRGIGRWTAEMFLMFN
LMRPNVLPLDDIGLINAISANYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDPLPV
TY
NT seq 729 nt   +upstreamnt  +downstreamnt
gtggtgaccaaggccgacggcaagccggcgctgaagacggcgcgcgccggcaagacgacg
ctgcccgaggccgcggcgatcccgctgccggtcgagaccgtcgagggcgccgtgcgtccc
gcctattgggacgaggcctgcgccgacctgatgaagcgcgatcgcatcctgcgcaagatg
atcccgacgtacgggccggcccatctgatttcgcgcggcgaccccttcatcacgctggcg
cgttcgatcgtcgggcagcagatctcggtcaaggccgcgcaatcggtgtgggaccggctg
gcggccgcctgtccgaagctgaccccggcgcagctgctgcgggccggcgtcgacaagctg
gccgcctgcgggctgtcgcgccgcaaggccgaatacatcgtcgacctggccgatcacttc
aaggcgggacgcgtccatgtcgacaaatgggccgagatggacgacgaggcggtgatcgcc
gaactgacgcagatccgcggcatcggccgctggaccgccgagatgttcctgatgttcaac
ctgatgcggcccaacgtgctgccgctggacgacatcgggctgatcaacgcgatctccgcc
aactatttcagcggagaaccggtcacgcgcagcgaggcccgcgaagtggcagcgaactgg
gaaccatggcgcaccgtggcgacctggtacatgtggcgcagccttgatccgctgcctgtc
acttactag

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