Cupriavidus gilardii: CR3_1615
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Entry
CR3_1615 CDS
T04050
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cgd
Cupriavidus gilardii
Pathway
cgd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cgd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CR3_1615 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgd03400
]
CR3_1615 (xthA)
Enzymes [BR:
cgd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CR3_1615 (xthA)
DNA repair and recombination proteins [BR:
cgd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CR3_1615 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Herpes_UL56
Motif
Other DBs
NCBI-ProteinID:
ALD90843
LinkDB
All DBs
Position
1:1954993..1955928
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AA seq
311 aa
AA seq
DB search
MRCCATAGWRHERRARRPAGRHRRRRRGAGPGSTLPPPLPATAPATLRIASWNVNSLKIR
LPQVLDWLIAQENADTPIDALCLQELKLPEDKYPLAELESAGFHSIFVGQKTYNGVAILA
RNTTMPPAADVVRNIPGFEDEQQRVVAGTYGDVRLVCAYFPNGQAPDSDKFAYKLRWLEA
LTAWLREELQRYPKLALLGDFNIAPEDRDVHDPAKWEGQNLVSPPERAAFQRLLELGFAD
AFRLFEQPEKSFSWWDYRMLAFRRNAGLRIDHILLSPALRERCTDCTIDRTPRKWEQPSD
HTPVVATMRLG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgctgcgccacggcgggatggcggcatgagcggcgcgcccgacgacctgctggc
cggcatcgacggcgccggcgcggtgccggcccgggcagcacgctgccgccaccgctgccc
gccaccgcgccggccacgctgcggatcgcctcgtggaacgtcaactcgctgaagatccgg
ctgccgcaggtgctcgactggctgatcgcgcaggaaaacgccgacacgccgatcgacgcg
ctgtgcctgcaggaactgaagctgcccgaggacaagtacccgctcgcggaactggagagt
gccggattccacagcatcttcgtcggccagaagacctataacggcgtggcgatcctggcg
cgcaataccacgatgccgcccgccgccgacgtggtgcgcaatatcccgggcttcgaggac
gagcagcaacgcgtggtcgccggcacctatggcgacgtgcgcctggtctgcgcctatttc
cccaacggccaggcgcccgacagcgacaagttcgcctacaagctgcgctggctcgaggcg
ctgaccgcgtggctgcgcgaggaactgcagcgctatccgaagctggcgctgctgggcgac
ttcaatatcgcgcccgaggatcgcgatgtgcacgacccggccaagtgggaaggccagaac
ctggtctccccgccggagcgcgccgccttccagcggctgctggaactgggcttcgccgat
gccttccggctgttcgaacagcccgagaagagcttctcgtggtgggactaccggatgctg
gcgttccgccgcaatgccggcctgcggatcgaccatatcctgctgtcgccggcgctgcgc
gagcgctgcaccgactgcacgatcgaccgcacgccgcgcaaatgggagcagccgtcggac
catacgccggtcgtcgccacgatgcggctcggctga
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