Cupriavidus gilardii: CR3_1972
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Entry
CR3_1972 CDS
T04050
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cgd
Cupriavidus gilardii
Pathway
cgd03030
DNA replication
cgd03410
Base excision repair
cgd03420
Nucleotide excision repair
cgd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CR3_1972 (polA)
03410 Base excision repair
CR3_1972 (polA)
03420 Nucleotide excision repair
CR3_1972 (polA)
03440 Homologous recombination
CR3_1972 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgd03032
]
CR3_1972 (polA)
03400 DNA repair and recombination proteins [BR:
cgd03400
]
CR3_1972 (polA)
Enzymes [BR:
cgd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CR3_1972 (polA)
DNA replication proteins [BR:
cgd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CR3_1972 (polA)
DNA repair and recombination proteins [BR:
cgd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CR3_1972 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CR3_1972 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ALD91183
LinkDB
All DBs
Position
1:complement(2396255..2399068)
Genome browser
AA seq
937 aa
AA seq
DB search
MSDSPKTLLLVDGSSYLYRAYHALPDLRNGEGLPTGAIYGMINMLRKLRNDYPAEYSACV
FDAKGKTFRDALYPAYKEHRPSMPDDLARQIEPIHEAVRALGWPIVVVDGVEADDVIGSL
ACQATAEGIRTVVSTGDKDLAQLVNDSVTLVNTMSGEILDPAGVLAKFGVPPERIVDYLS
LIGDAVDNVPGVPKVGPKTAVKWLTEYGTLDGIIANADKIKGVVGENLRNTLEWLPRARE
LVTVKIDCDLSEPIPDFHALRDMGEDKEKLVAFFSRYGFKTWLRELTGEKLPDARAQAAA
AASRNGAGQGSLFDGPGAAAGDAAPAEAPPAEIRYETVVTESALEEWARRIERAELTCID
TETTSIDPMQAQLVGISLSVEPGIACYIPVAHQGPDVAGMEGRGQLPRDVVLARLRAWLE
DPARYKVGQHLKYDVHVFANHGIALRGIRHDTMLQSYVLASHRNHGMDSLAERLLNLKTL
TYEEVCGKGVNQLCFDQIDLARATEYAAEDADVTLRLHRKMYPQLEAADGLRYVYERIEM
PVSVVLQKIERNGVLIDAPRLAAQSAELGQRMMELEQRAYEAAGQPFNLGSPKQIGEILF
GRMQLPVVKKTSSGAPSTDEEVLQKLAEDYPLPRLLLDYRALSKLKSTYTDKLPRMVNPA
TGRVHTSYGQATAVTGRLASTEPNLQNIPVRTEEGRRIREAFIASPDHAIVSADYSQIEL
RIMAHISGDENLLGAFARGDDIHRATAAEIFGVAADAVSSEQRRYAKVINFGLIYGMSAF
GLASNLGIEREAAKHYIDRYFMRYPGVARYMEETRQTAREQGYVETVFGRRLWLPDINGG
NGPRRQAAERAAINAPMQGTAADLIKLSMIAVQDWIERESLGTRQIMQVHDELVLEVPTA
ELELVRTRLPELMCGVAELRVPLVAETGVGANWEEAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagtcctaaaacactgctgctcgtcgatgggtcgagctatctgtatcgcgct
tatcacgcgctgccggatctgcgcaacggcgaaggcctgcccacgggggccatctacggc
atgatcaacatgctgcgcaagctgcgcaacgattacccggcagagtatagcgcctgcgtg
ttcgacgccaagggcaagaccttccgcgatgcgctgtaccccgcatacaaggaacatcgc
ccctcgatgcccgacgatctcgccaggcagatcgagccgatccacgaggcagtgcgcgcg
ctgggctggccgatcgtcgtcgtcgatggtgtcgaggccgacgacgtgatcggctcgctg
gcctgccaggccaccgccgaaggcatccgcaccgtggtgtcgaccggcgacaaggacctg
gcgcagctggtgaacgacagcgtcacgctggtcaatacgatgagcggcgaaatcctcgat
cctgccggcgtgctggccaagttcggcgtgccgcccgagcgcatcgtcgactatctgtcg
ctgatcggcgatgcggtcgacaacgtgccgggcgtgcccaaggtcggcccgaagaccgcg
gtcaaatggctgaccgaatacggcacgctcgacggcatcatcgccaacgcggacaagatc
aagggcgtggtcggcgagaacctgcgcaatacgctcgagtggctgccgcgtgcgcgcgag
ctggtgacggtgaagatcgactgcgacctgtccgagccgatccccgatttccatgcgctg
cgcgacatgggcgaggacaaggagaagctggttgcgttcttctcgcgctacggcttcaag
acgtggctgcgcgagctgaccggcgaaaagctgcccgacgcgcgcgcgcaggccgccgcc
gcggcctcgcgcaacggtgcgggccagggcagcctgttcgatgggcccggcgcggcagcg
ggcgacgcggcgccggccgaagcgccgccagccgagatccgctacgagaccgtggtcacc
gaatcggcgctcgaggaatgggcgcgccgcatcgaacgcgccgagctgacctgcatcgat
accgagaccacgtcgatcgatccgatgcaggcgcagctggtcggcatctcgctgtcggtc
gagcccggcatcgcctgctatatcccggtcgcgcaccaggggcccgacgtggccggcatg
gaaggccgcggccagctgccgcgcgacgtcgtgctggcgcggctgcgcgcgtggctggaa
gatccggcgcgctacaaggtcggccagcatctgaagtacgacgtccatgtgttcgccaac
cacggcatcgcgctgcgcggcattcgccatgacacgatgctgcagagctacgtgctggcc
tcgcaccgcaatcacggcatggacagcctcgccgaacggctgctgaacctgaagacgctg
acctacgaagaggtctgcggcaagggcgtcaaccagctgtgcttcgaccagatcgatctg
gcgcgcgcgaccgagtacgcggccgaggacgccgacgtgacgctgcgcctgcatcgcaag
atgtatccgcagctggaggcggccgacggcctgcgctacgtctacgagcgcatcgagatg
ccggtgtcggtggtgctgcagaagatcgagcgcaacggcgtgctgatcgacgcgccgcgc
ctcgccgcgcagagcgccgaattgggtcagcgcatgatggaactggagcagcgcgcctac
gaggccgccggccagccgttcaatctgggctcgccgaagcagatcggcgagatcctgttc
gggcggatgcagctgccggtcgtcaagaagaccagcagcggcgcaccgtcgaccgacgaa
gaggtgctgcagaagctggccgaggactatccgctgccgcggctgctgctcgactatcgc
gcgctgtccaagctgaagtcgacctacaccgacaagctgccgcgcatggtcaatccggcc
accggccgcgtgcataccagctacggccaggccaccgcggtgaccggccgtctggcatcg
accgagccgaacctgcagaacatcccggtgcgtaccgaagagggcaggcgcattcgcgag
gccttcatcgcgtcgccggaccatgcgatcgtgtcggccgactattcgcagatcgagctg
cgcatcatggcccatatctcgggcgacgagaacctgctcggcgccttcgcgcgcggcgac
gacatccaccgcgccaccgcggccgagatcttcggcgtggcggccgatgcggtcagcagc
gagcagcgccgctatgccaaggtcatcaacttcggcctgatctacggcatgagcgcgttc
ggactggcgagcaatctcggcatcgaacgcgaggcggccaagcactatatcgaccgctat
ttcatgcgctatccgggcgtggcgcgctacatggaagaaacccggcagacggcgcgcgag
cagggctatgtcgagaccgtgttcggccgccgcctgtggctgccggacatcaacggcggc
aacggcccgcgccgccaggccgccgagcgcgcggcgatcaacgcgccgatgcagggcacg
gcggccgacctgatcaagctgtcgatgatcgccgtgcaggactggatcgaacgcgagtcg
ctcggcacgcgccagatcatgcaggtgcacgacgaactggtgctggaggtgccgaccgcc
gaactggagctggtgcgcacgcgcctgccggaactgatgtgcggcgtggccgagctgcgc
gtgccgctggtcgccgagaccggtgtcggcgcgaactgggaagaagcgcactga
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