Cupriavidus gilardii: CR3_2347
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Entry
CR3_2347 CDS
T04050
Symbol
rnb
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cgd
Cupriavidus gilardii
Brite
KEGG Orthology (KO) [BR:
cgd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgd03016
]
CR3_2347 (rnb)
Enzymes [BR:
cgd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CR3_2347 (rnb)
Transfer RNA biogenesis [BR:
cgd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CR3_2347 (rnb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ALD91556
LinkDB
All DBs
Position
1:complement(2854269..2856401)
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AA seq
710 aa
AA seq
DB search
MQLLFEEGGEIRAGTVLNQQGEAYQVELPAGKRTKVKSRDVLLQFAQPSAAELLSQTAAL
TGDIDLDFLWECAPEQEFGFTELAAEYYGASASPAQQAALAMALHGNPVYFRRKGRGRYQ
RAPEDQLKAALAGLERKRQQALVQAEYEQQLKAGTLPEAFRGKVLTLLFKPDKNSLEYKA
LDAACTALGKSPMRLMIEVGGVPNARALHEARFLSECFPRGTGFPEVTVPEPAGELPLAP
VQAFSIDDVTTTEIDDALSVMPLDEGRLRIGIHIAAPGLGIRRGDPLDAIARQRLSTVYF
PGDKITMLPDAVVERYTLQEGRQCPALSLYVIYDPAAQQILASETRAEMVSIAANLRHNL
LDEVVTEAALTEGTGDYPFREALTALWGFANFLYDERQRARVASGLRPESHSRADYSFYL
DEQDDGSQRVRIEQRKRGSPLDKIVAELMILANSTWGKLLADHGVPGIYRTQKAWGMHRT
RMQTYPAPHEGLGVAQYAWSTSPLRRYVDLVNQWQIIAAAQHGVTAKLVAPFKPKDADLL
AAVADFEGTYAAYAEHQSTMERYWCLRWLAQENRERMMATVLKDGAVRFAEIPLVTRVPE
LAQAARGTQVLLEIAGTDELTLEVSCRVLEVFAGEGELPAEELEGDEESAEVSAEAAAEV
AAEQAAEEAAEQGTETVPETLDGAGADAGAEAAPGTGVGDSGPDSGRAAS
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgttgttcgaggaaggcggcgagatccgcgccggtaccgtgctgaatcagcaa
ggcgaggcctatcaggtcgaattgcccgcgggcaagcgcaccaaggtcaagtcgcgcgac
gtgctgctgcagtttgcgcagccgagcgcggccgagctgctgtcgcagaccgcggcgctg
accggcgacatcgatctcgatttcctgtgggaatgcgcccccgagcaggagttcggcttc
accgagctggccgccgaatactacggcgcgtcggccagccccgcgcagcaggcggcgctg
gcgatggcgctgcacggcaatccggtctacttccgccgcaagggccgcggccgctaccag
cgcgcgcccgaggaccagttgaaggcggcgctggccgggctcgagcgcaagcgccagcag
gcgctggtgcaggccgagtacgagcagcagctgaaggcgggcacgctgcccgaggcgttc
cgcggcaaggtgctgacgctgctgttcaagccggacaagaacagcctcgaatacaaggcg
ctcgacgccgcctgcaccgcgctgggcaagtcgccgatgcggctgatgatcgaggtcggc
ggtgtgccgaacgcgcgcgcgctgcacgaggcccgtttcctgtcggaatgcttccccagg
ggcaccggctttccggaggtcacggtgcccgagcccgcgggcgagttgccgctggcgccg
gtccaggcgttctcgatcgacgatgtcaccaccaccgaaatcgacgacgcgctgtcggtg
atgccgctggacgaggggcgcctgcgcatcggcatccatatcgcggcgccgggcctgggc
atccgccgcggcgatccgctcgacgcgatcgcgcggcagcggctgtcgacggtctacttc
cccggcgacaagatcacgatgctgccggatgcggtggtcgagcgctatacgctgcaggaa
gggcggcagtgcccggcgctgtcgctgtacgtgatctacgaccccgcggcgcagcagatt
ctcgccagcgagacgcgcgccgagatggtcagcatcgccgccaacctgcgccacaacctg
ctcgacgaggtggtgaccgaggccgcgctgaccgaaggcaccggcgactatccgttccgc
gaagcgctgaccgcgctgtggggcttcgccaatttcctgtacgacgaacgccagcgcgcg
cgcgtcgccagcggcctgcggcccgaatcgcacagccgcgcggactacagcttctatctg
gacgagcaggacgacggcagccagcgcgtacgcatcgagcagcgcaagcgcggctcgccg
ctggacaagatcgtcgccgagctgatgatcctggccaacagcacctggggcaagctgctg
gccgaccacggcgtgccgggcatctaccgcacgcaaaaggcctggggcatgcaccggacc
cgcatgcagacgtatccggccccgcatgaaggcctgggcgtcgcgcagtatgcgtggagc
acgtcgccgctgcgccgctacgtcgatctggtcaatcaatggcagatcatcgcggcggca
cagcatggcgtgaccgccaagctggtggcgccgttcaagcccaaggacgccgatctgctg
gccgcggtcgcggatttcgagggcacctatgccgcctatgccgagcaccagtcgaccatg
gagcgctactggtgcctgcgctggctcgcgcaggagaaccgcgagcgcatgatggcgacc
gtgctgaaggacggcgcggtgcgctttgcggagatcccgctggtcacgcgcgtacccgag
ctcgcgcaggccgcgcgcggcacgcaggtgctgctggagatcgccggcaccgacgagctg
acgctggaagtcagctgccgcgtgctggaggtgtttgccggcgagggcgagctgcccgcc
gaagagctcgaaggcgacgaggagtcggcggaggtttccgccgaagccgcggccgaggtg
gcggccgagcaggccgcggaagaggccgccgagcagggtacggagacggtgcccgagacg
ctggacggcgccggtgccgatgccggcgccgaagcggcgcccggcaccggcgtcggcgac
agcggtcccgacagcggccgcgctgcctcctga
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