Cupriavidus gilardii: CR3_2592
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Entry
CR3_2592 CDS
T04050
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cgd
Cupriavidus gilardii
Pathway
cgd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CR3_2592 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgd03021
]
CR3_2592 (rpoC)
03400 DNA repair and recombination proteins [BR:
cgd03400
]
CR3_2592 (rpoC)
Enzymes [BR:
cgd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CR3_2592 (rpoC)
Transcription machinery [BR:
cgd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CR3_2592 (rpoC)
DNA repair and recombination proteins [BR:
cgd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CR3_2592 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ALD91793
LinkDB
All DBs
Position
1:complement(3135187..3139437)
Genome browser
AA seq
1416 aa
AA seq
DB search
MKALLDLFKQVQQEEQFDAIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELAAPTAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAFVVLEPGMTPLKKSQIMSEDDYIAKCEEYGEGEFVAM
MGAEGIRELLRGIDIEKQIEQIRAELQATGSEAKIKKYAKRLKVLEAFQRSGIKPEWMIL
EVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRML
QEAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGP
TLKLHQCGLPKLMALELFKPFIFHKLETMGIATTIKAAKKEVESQTPVVWDILEEVIREH
PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQME
ARTLMLASNNVLFPANGDPSIVPSQDVVLGLYYTTRDKINGKGEGMTFADVSEVIRAYEN
KEVELASRVNVRITEYELVDKDAEGDARFAPKVTLQATTVGRAILSEILPKGLPFSVLNK
PLKKKEISRLINTAFRKCGLRETVIFADKLLQSGFRLATRAGISIAIDDMLVPPQKEKII
ADAAAKVKEYDKQYMSGLVTDQERYNNVVDIWGAAGDQVGKAMMEQLQHEDVVDRNGNTV
KQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFI
STHGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEEDCGTTNGVAMKALVEGGEVIEA
LRDRILGRVTVSDVVNPETQETAIEAGTLLDEDLVDLIDQIGVDEVKVRTPLSCDTRYGL
CAKCYGRDLGRGTLVNTGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKA
TGTVRFTATMRYVTNAKGELIVISRSGEALITDDHGRERERHKIPYGATLLVQDGQAIKA
GTQLATWDALTRPIVSEYSGTIKFENVEEGVTVAKQMDEVTGLSTLVVIDAKRRTAATKG
LRPQVKLLDANGQEVKIPGTDHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRD
ITGGLPRVAELFEARSPKDAAVLAEVTGTVSFGKDTKGKQRLVITDLDGNAHEFLIAKEK
QVLVHDGQVVNKGEMIVEGPADPHDILRLKGIEELAHYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQIVDVGDTKFIPGEQVERSELLDENDRVIAEGKRPATYENLLLGITKASL
STDSFISAASFQETTRVLTEAAIMGKTDDLRGLKENVIVGRLIPAGTGLAYHRARKAREA
AERERAQAISDEEQSLFMEPSEVHATTENGGDNPAV
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcattgctcgatctctttaagcaggttcagcaggaagagcagttcgacgcgatc
aagatcggtctggcctcgcccgagaagatccgctcgtggtcgtacggcgaagtcaagaag
ccggaaaccatcaactaccgtacgttcaagcccgagcgcgatggtctgttctgcgccaag
atcttcggtccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcac
cgtggcgtgatctgcgagaagtgcggcgtcgaagtgacgctggcgaaggtgcgccgcgag
cgcatgggccatatcgaactggccgcgccgaccgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgacatcgagcgcgtgctgtat
ttcgaagcgttcgtggtgctcgagcccggcatgaccccgctcaagaagagccagatcatg
tccgaggacgactacatcgcgaagtgcgaggagtacggcgagggcgagttcgtcgcgatg
atgggtgccgagggcatccgtgaactgctgcgcggcatcgacatcgagaagcagatcgaa
cagatccgcgccgagctgcaggccaccggttccgaagccaagatcaagaagtacgccaag
cgcctgaaggtgctcgaggccttccagcgttcgggcatcaagcccgagtggatgatcctc
gaagtgctgccggtgctgccgcccgaactgcgtccgctggtgccgttggacggcggccgc
ttcgcgacctcggacctgaacgacctgtatcgccgcgtgatcaaccgcaacaaccggttg
aagcgcctgctcgagctgaaggcccccgaaatcatcgtgcgcaacgaaaagcgcatgctg
caggaagcggtcgactcgctgctggacaacggccgtcgcggcaaggcgatgaccggcgcc
aacaagcgcccgctgaagtcgctggccgagatgatcaagggcaagggcggtcgtttccgt
cagaacctgctgggcaagcgcgtcgactactccggccgttcggtcatcgtggtcggtccg
acgctgaagctgcaccagtgcggcctgcccaagctgatggcgctggagctgttcaagccc
ttcatcttccacaagctggaaacgatgggcatcgccaccaccatcaaggcggccaagaag
gaagtcgagagccagacgccggtcgtgtgggacatcctcgaagaggtgatccgcgagcac
ccggtgatgctgaaccgcgcgccgacgctgcaccgcctgggcatccaggccttcgaaccg
gtgctgatcgaaggcaaggcgatccagctgcatccgctggtctgcgcggcgttcaacgcc
gacttcgacggcgaccagatggccgtccacgtgccgctgtcgctggaagcgcagatggaa
gcccgcacgctgatgctggcgtcgaacaacgtgctgttcccggccaacggcgatccgtcg
atcgtgccgtcgcaggacgtggtgctgggcctgtactacaccacccgcgacaagatcaac
ggcaagggcgagggcatgaccttcgccgacgtcagcgaggtgatccgcgcctacgagaac
aaggaagtcgaactggcttcgcgcgtgaacgtgcgcatcaccgagtatgagctggtcgac
aaggacgccgagggcgacgcgcgtttcgcgccgaaggtcacgctgcaggccaccacggtc
ggccgcgcgatcctgtccgagatcctgccgaagggcctgccgttctcggtgctgaacaag
ccgctgaagaagaaggaaatctcgcgcctgatcaacaccgcattccgcaagtgcggcctg
cgcgagacggtgatcttcgccgacaagctgctgcagtcgggcttccgcctggccacgcgc
gccggtatctcgatcgcgatcgacgacatgctggtgccgccgcagaaggaaaagatcatc
gccgacgccgcggccaaggtgaaggaatacgacaagcagtacatgtcgggtctggtgacg
gaccaggagcgctacaacaacgtcgtggacatctggggcgccgccggcgaccaggtcggc
aaggcgatgatggagcagctgcagcacgaggacgtggtcgaccgcaacggcaacaccgtc
aagcaggagtcgttcaactccatctacatgatggccgactcgggcgcacggggttccgcg
gcgcagatccgtcagctggccggtatgcgtggcctgatggccaagccggacggctcgatc
atcgagacgccgattaccgcgaacttccgcgaaggcctgaacgttctgcagtacttcatc
tcgacccacggcgcccgtaagggcctggccgataccgcgctgaagaccgcgaactcgggt
tacctgacccgtcgtctggtcgacgtgacgcaggatctggtggtggtcgaggaggattgc
ggcaccaccaacggcgtcgcgatgaaggcgctggtcgagggcggtgaagtcatcgaagcg
ctgcgcgaccgtatcctgggccgcgtgacggtgtcggacgtggtcaaccccgagacgcag
gaaaccgcgatcgaggccggcacgctgctggacgaagatctggtcgacctgatcgaccag
atcggtgtcgacgaggtcaaggtccgtaccccgctgtcgtgcgacacgcgctatggcctg
tgcgccaagtgctatggccgcgatctgggccgcggcacgctggtcaacaccggcgaggcg
gtcggcgtgatcgccgcgcagtcgatcggcgagccgggcacgcagctgacgatgcggacg
ttccacatcggtggtgcggcatcgcgcgcggcggttgcctcgagcgtcgaagcgaaggct
accggcacggtgcgcttcaccgcgacgatgcgctatgtgaccaacgccaagggcgaactg
atcgtgatctcgcgttcgggcgaggcgctgatcaccgacgaccacggccgcgagcgcgag
cgccacaagatcccgtacggcgccacgctgctggtgcaggacggacaggcgatcaaggcg
ggcacgcagctggcgacgtgggacgcgctgacgcgcccgatcgtgtcggagtactcgggc
acgatcaagttcgagaacgtcgaggaaggcgtgaccgtcgccaagcagatggacgaggtc
accggtctgtcgacgctggtcgtgatcgacgccaagcgccgtacggctgccaccaagggc
ctgcgcccgcaggtgaagctgctcgacgccaacggccaggaagtcaagattccgggcacg
gaccactccgtgaccatcggcttccaggtcggcgcgctgattaccgtcaaggatggtcag
caggtgcacgtcggtgaagtgctggcgcgtatcccgaccgagtcgcagaagacccgcgac
attaccggtggtctgccgcgtgtggccgagctgttcgaagcgcgttcgccgaaggacgcc
gccgtgctggcggaagtcaccggtaccgtgtcgttcggcaaggacaccaagggcaagcag
cgtctggtcatcaccgacctcgacggcaatgcgcacgagttcctgatcgccaaggaaaag
caggtgctggtccacgacggtcaggtggtgaacaagggcgagatgatcgtcgagggtccg
gcggatccgcacgacatcctgcgcctgaagggcatcgaggagctggcgcactacatcgtc
gatgaagtgcaggacgtctaccgtctgcagggcgtgaagatcaacgacaagcacatcgaa
gtgatcgtgcgtcagatgctgcgccgcgtgcagatcgtcgatgtcggcgacaccaagttc
atcccgggtgaacaggtggagcgctcggagctactggacgaaaacgaccgcgtgatcgcg
gaaggcaagcgtccggcgacctacgagaacctgctgctcggtatcaccaaggcgtcgctg
tcgaccgacagcttcatctcggcggcatcgttccaggaaacgacgcgcgtgctgaccgag
gccgcgatcatgggcaagaccgacgacctgcgtggtctgaaggaaaacgtgatcgtgggc
cgtctgatcccggccggtacgggcctggcctaccaccgcgcccgcaaggcgcgcgaggcg
gccgagcgcgaacgcgcccaggcaatctccgacgaagagcagtcgctgttcatggagccg
tcggaggtgcatgccaccaccgagaacggcggggacaacccggcggtctga
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