Cupriavidus gilardii: CR3_3092
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Entry
CR3_3092 CDS
T04050
Symbol
ada-alkA
Name
(GenBank) AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cgd
Cupriavidus gilardii
Pathway
cgd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cgd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CR3_3092 (ada-alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgd03000
]
CR3_3092 (ada-alkA)
03400 DNA repair and recombination proteins [BR:
cgd03400
]
CR3_3092 (ada-alkA)
Enzymes [BR:
cgd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CR3_3092 (ada-alkA)
Transcription factors [BR:
cgd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CR3_3092 (ada-alkA)
DNA repair and recombination proteins [BR:
cgd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CR3_3092 (ada-alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ALD92280
LinkDB
All DBs
Position
2:180306..181877
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AA seq
523 aa
AA seq
DB search
MELDPDTCYRAVVSHDRRFDGRFFVAVSSTGIYCRPVCAVRTPKRENCSFFATAAAAEKH
GYRPCLRCRPELAPGHGLADLSGRLAQAAATLIDEGFLADAGVPELAARIGVTERHLRRL
FTAQFGVSLVEYAQTQRLLLAKRLLTDTALPVTEVALAAGFGSVRRFNDVLKTRYGLAPT
AMRKRAAGMPADRLVFELGYRPPFAWAALLQFLGARAVPGVEQIRPDAHGGEYGRTVAIE
VAGRLHSGWIRLALAPQRHVLRVTLSGSLAHAIPQVLGKVRRLCDLGCRPDVVDRHLGAL
AADMPGMRLPGTVDGFEIAVRAVLGQVVSLAQARAMLHRLVLAHGTPLAVPMDELRACFP
SAATLAAVPVTEIHALGVPQAKARAIQAIATAVVDGRLSLEPGVEPAQTVAALCTIDGVG
DWTAQYIAMRALGWPDAFPATDYALRKVLGIERTGEMLRHAAQWAPWRAYAAMHLWRQYQ
DLQDGRERERVTARAAPAGVGGAGGKQAVPRRTRRPQSQEQPT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggaactcgatcccgacacctgctaccgcgccgtggtttcgcacgaccgccgcttcgac
gggcgctttttcgtcgccgtgtcgtcgaccggcatctactgccggccggtctgcgcggtg
cgcacgcccaagcgcgaaaactgcagtttcttcgccacggcggcggccgccgagaagcat
ggctaccggccctgcctgcgttgccggccagagctcgctccgggacatgggctggccgat
ctgtccgggcggctggcgcaggcggcggcgacgctgatcgacgagggcttcctcgccgat
gccggcgtgccggagctggcggcgcgcatcggcgtcaccgagcggcatctgcggcggctg
tttaccgcgcagttcggcgtctcgctggtcgaatacgcgcagacgcagcgcctgctgctg
gccaagcggctgctgaccgataccgcgttgcccgtcaccgaggtggccctcgcggccggc
ttcggcagcgtccgccgcttcaacgacgtgctgaagacgcgctatggcctcgccccgacc
gcgatgcgcaagcgcgcggcgggcatgccggcagaccgcctggtgttcgagctcggctat
cggccgccgttcgcgtgggccgcgctgctgcagttcctcggcgcgcgtgcggtgccgggc
gtcgagcagatccggcccgacgcgcatggcggcgaatacggacgcaccgtggccatcgag
gtggccggacggctgcacagcggctggatccggctggcactggccccgcagcgccacgtg
ctgcgcgtgacgctatccggttcgctggcgcatgccattccgcaggtgctcggcaaggtc
cggcgcctgtgcgatctgggttgccggcccgatgtggtcgaccgccatctgggcgcgctg
gccgccgacatgccgggcatgcggctgccgggtacggtggacggcttcgagatcgcggtg
cgcgcagtgctcggtcaggtcgtctccctggcgcaggcacgcgcgatgctgcatcggctg
gtgctggcccatggcacgccgctggccgtgccgatggacgagttgcgcgcctgtttcccg
agcgccgccacgttggccgcggtgccggtcacggaaatccatgcgcttggcgtgccgcag
gccaaggcccgcgcgatccaggcgatcgccacggcggtggtcgatggcaggctgtcgctc
gaaccgggcgtggagcccgcgcaaaccgttgcggcgctatgcaccatcgacggcgtgggg
gactggaccgcgcaatacattgccatgcgggcgctgggctggcccgatgcgttcccggcc
accgactacgcgctgcgcaaggttctgggcatcgagcgcaccggcgagatgctgcggcac
gccgcgcagtgggcgccgtggcgcgcctacgcggccatgcatctgtggcgccagtaccag
gacttgcaggacggccgcgagcgcgagcgtgtgaccgcgcgcgccgcaccggcgggcgtc
ggcggcgccggcggcaagcaagccgtaccgcgccgcacccgccgtccacagtcacaggag
cagccaacatga
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