Cupriavidus gilardii: CR3_3748
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Entry
CR3_3748 CDS
T04050
Symbol
cpdB
Name
(GenBank) 2':3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
cgd
Cupriavidus gilardii
Pathway
cgd00230
Purine metabolism
cgd00240
Pyrimidine metabolism
cgd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
CR3_3748 (cpdB)
00240 Pyrimidine metabolism
CR3_3748 (cpdB)
Enzymes [BR:
cgd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
CR3_3748 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
CR3_3748 (cpdB)
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Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
DUF5395
Motif
Other DBs
NCBI-ProteinID:
ALD92935
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All DBs
Position
2:1018916..1020958
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AA seq
680 aa
AA seq
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MARLAALATVTVLAACGSDDDGAGNPGPGTPPPAAVAPGTRATLALLETTDLHSNVRSYD
YFKLAEDQTMGFERVSTLIKQARAEFPNTMLLDNGDTIQGTALADYQAQVSPLSCGDTLA
MYKVMNAARFDGGGIGNHEFNYGLPFLNQVTGNRFNVDGLPEPAAQTACAGPTFPQVLAN
VYSVKSKAPLFQPYTIITRQLSATAPDGKAVTVPVKVGIIGFAPPAIMTWDKRWLDGKVY
TVGAREAAEQYIPEMRAKGADLVVVISHGGLDASTYSPNMENASWHLSKVPGVDAMLIGH
SHQIFPDANSTVAQFNLPGVDKARGLVNGVPTVMANYWGKHLGVIKLELAHDGTRWTVDK
NATTVQARSIQKADKTYVEADPEVAAAIEAEHQATIAYVKTPIGTTDYRMNSYFADVGDP
GAIQIVNQAQAAYVKDYIAANLPDLASLPVLSVSAPFKSGFGGGSDYTDVQAGNLAINNA
ADLYLYPNTVYAVKVNGDEMKAWLETAARRFNQISTTASTEQQLISSFPGYNFDMFTSAD
LSYEIDVTQPVGSRIKNLSYLGAPVTASQQFIVATNNYRASGGGNFPGLDGSKTVYASPD
ANRDVLIAYIKKIGTITRAANGSARSWRFTKVATAGKVVFSSAPGQLPQAQAAGLSNITL
ESADDGSGKNLAKYAIDLNS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
ttggccaggctggcggccctggcgaccgttaccgtgctggctgcctgcggttccgatgac
gatggcgcgggcaatcccggtccgggcacgccgccgccggccgcggtcgcgccgggcacc
cgggccacgctggccttgctggagaccaccgatctgcacagcaacgtgcgcagctatgac
tatttcaagctggccgaagaccagaccatgggcttcgagcgcgtatcgacgctgatcaag
caggcgcgcgccgaattccccaacacgatgctgctggacaacggcgacacgatccagggc
accgcactggccgattaccaggcgcaggtcagcccgctgtcgtgcggcgatacgctggcg
atgtacaaggtgatgaacgcggccaggttcgatggcggcggtatcggcaatcacgagttc
aactacggcctgccgttcctgaaccaggtcaccggcaaccgcttcaacgtcgacgggctg
cccgagccggccgcgcagaccgcgtgcgcgggcccgacctttccgcaggtgctggccaac
gtctacagcgtcaagtcgaaggcgccgctgttccagccctacacgatcatcacgcggcag
ttgagcgccaccgcgcccgacggcaaggccgtgacggtgcccgtcaaggtcggcatcatc
ggcttcgcgccgccggcgatcatgacctgggacaagcgctggctcgacggcaaggtctac
acggtcggcgccagggaagccgccgagcagtacatccccgaaatgcgggcgaagggcgcc
gacctggtggtggtgatctcgcatggcggcctcgatgcgtcgacgtattcgccgaacatg
gagaacgcgagctggcatctgtcgaaggtgcccggcgtcgatgcgatgctgatcgggcat
tcgcaccagatcttccccgacgccaacagcaccgtggcgcagttcaacctgcccggcgtc
gacaaggccagggggctggtcaacggcgtgccgacggtaatggcgaactactggggcaag
cacctgggcgtgatcaagctcgaactcgcccatgacggcacgcgctggacggtcgacaag
aatgcgaccacggtgcaggcgcgctcgatccagaaggccgacaagacctatgtcgaggcc
gacccggaggtcgccgctgccatcgaggcagagcaccaggccaccatcgcctacgtgaag
acgccgatcggcaccaccgactaccggatgaacagctacttcgcggacgtcggcgatcca
ggggcgatccagatcgtcaatcaggcccaggcggcctacgtcaaggactacatcgccgcc
aacctgccggacctggcgtcgctgccggtgctgtcggtgtcggcgccgttcaagagcggt
ttcggcggcggcagcgactacacggacgtgcaggccggcaacctggccatcaacaacgcc
gccgatctctacctgtatccgaatacggtctacgcggtgaaggtcaatggcgacgagatg
aaggcctggctcgagaccgcggctcgccgcttcaaccagatcagcaccacggcgagcacc
gagcagcagctgatcagcagcttcccgggctacaacttcgacatgttcaccagcgcggac
ctgagctacgagatcgacgtgacccagccggtcggcagccgcatcaagaacctcagctat
ctcggcgcaccggtgaccgccagccagcagttcatcgtcgccaccaacaactaccgcgcc
agcggcggcggcaactttccggggctggacggcagcaagaccgtttacgcctcgcccgat
gcgaaccgcgacgtgctgattgcctacatcaagaagatcggcaccatcacccgtgccgcc
aacggctcggcacgcagctggcgtttcaccaaggtcgcgaccgcgggcaaggtggtgttc
agttccgcgccggggcagctgccgcaggcgcaggccgccggtctgtccaatatcacgctg
gagagcgccgacgacggctccggcaagaacctggcgaaatatgcgatcgacctcaacagt
tga
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