KEGG   Cupriavidus gilardii: CR3_4204
Entry
CR3_4204          CDS       T04050                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cgd  Cupriavidus gilardii
Brite
KEGG Orthology (KO) [BR:cgd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cgd03400]
    CR3_4204
Enzymes [BR:cgd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CR3_4204
    5.6.2.6  RNA 3'-5' helicase
     CR3_4204
DNA repair and recombination proteins [BR:cgd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CR3_4204
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII SecA_DEAD AAA_22
Other DBs
NCBI-ProteinID: ALD93386
LinkDB
Position
2:complement(1580476..1583850)
AA seq 1124 aa
MNARVADARSVPAAPLAQALPQWFARRGWQPFPFQQQVWQAIAAGRSGLVHATTGTGKTY
AAWLGALLRHGEPAAQSSIAPPLTVLWLTPMRALAADTARALQAPLAELGLNWTVGLRTG
DTGSSERAAQARRLPTALVTTPESLSLLLTRADAREALGRVRMVVVDEWHELIGNKRGVQ
VQLALARLRRWCPDLVVWGLSATLGNLEHASEVLLSGMPADRRELVRGKIPKQLIVDTLL
PDAAGRFPWAGHLGLSMLPHVVREIEASSTTLVFLNTRSQAERWYLALLEARPDWAGQLA
LHHGSLDRDVREWVEAGLKTGTLKAVVCTSSLDLGVDFLPVERVLQVGSPKGVARLLQRA
GRSGHAPGRPSRVTIVPTHSLELVEAVAARHAVRAGRIEARESPIKPLDVLVQHLVTVAL
GGGFVPDALLDEVRGAYAYRTLTDAEWQWCLDFVRQGGSSLSAYPDYRRVQPDEDGVWRV
PDVRLARRHRMSVGTIVSDATMQVRYWSRAGRGGASLGTVEEGFIARLSPGDCFLFGGRL
LELVRVQEMTAYVRRADKGRPVVPRWNGGRMPLSTELADAVVATLEDAAAQRLDPADTPE
LPLIQPLVDLQQRWSALPTRTTLLAETLNSREGSHLFLYPFAGRSVHLGLGSLLAWRLGS
QLPTTISVAVNDYGLELLSAEPLDWAHWLPLVLAQERQRDLVADVLASLNAGELSLRRFR
EIARVSGLVFQGYPGAHKSARQLQASSSLFYEVFRKHDPENLLLGQAEREVLNQELDAAR
LSRTLDRLAELRLDLRVLKRPTPLSFPLIVEFLREKLSTEKLADRIARMLADLERAAGRK
GRAAMCPGRRRSRHRTASRRSRASAWPIMPAARRRPHHRHRPGAGARARSRSRCRRYERA
DVIRFFVRTAGGGRRRDAVAAAGARALVAGRRDAAGGRRPFRQGCRLSRAGPAGAGRHHA
RQPGTAGGSGGALSGARAGLSRGFSPCPREPHAGGAGGPRGLAPRASVDAALHAGTRQSR
CTGRRSAALARYHGGQRTVAARTIRAVPLAGSGERRLRTGRAPASRLYAARRLRLGSSAV
LRLRCACRHPAGVRAFTGHAPVRRAPDRRLYVIGDDRVWAVPAR
NT seq 3375 nt   +upstreamnt  +downstreamnt
atgaacgcgcgcgtcgccgatgcgcggtccgtgcccgccgcgccgctggcgcaggcgctg
ccgcaatggttcgcgcggcgcggctggcagccgtttccgttccagcaacaggtgtggcag
gcgatcgccgccggccgcagcggcctcgtgcatgcgaccaccggcaccggcaagacctat
gcggcatggctcggcgcgctgctgcgccatggcgagccggcggcgcagtcttccattgcg
ccgccgctgaccgtgctgtggctgacgccgatgcgcgcgctggccgcggacaccgcgcgt
gcgctgcaggcgccgctggccgagctcggcctgaactggaccgtcggcctgcgcaccggc
gacacgggcagcagcgagcgcgccgcgcaggcgcggcggctgccgaccgcgctggtcacc
acgccggagagcctgtcgctgctgctgacgcgggccgatgccagggaagcgctgggccgc
gtgcgcatggtcgtggtcgacgaatggcacgagctgatcggcaacaagcgcggcgtgcag
gtacagctggcgctggcgcggctgcgccgctggtgtcccgatctggtggtctggggtttg
tcggccacgctgggcaatctcgaacacgccagcgaggtgctgctgtccggcatgccggcc
gatcggcgcgaactggtgcgcggcaagataccgaagcagctgatcgtcgatacgctgctg
cctgacgccgccggacgctttccgtgggccgggcatctgggcctgtcgatgctgccgcat
gtggtgcgcgagatcgaggccagcagcaccacgctggtgttcctgaacacccgctcgcag
gcagagcgctggtacctggcgttgctggaggcgcggccggattgggcgggacagctggcg
ctgcatcacggctcgctggatcgcgacgtgcgcgaatgggtcgaggccggcctgaagacc
ggcacgctgaaggcggtggtgtgcacctccagcctggatctgggcgtcgacttcctgccg
gtcgagcgcgtgctgcaggtcggctcgcccaagggcgtggcgcggctgctgcagcgtgcg
ggccgctccggccacgcgccggggcggccctcgcgcgtgacgatcgtgccgacccacagc
ctcgaactggtcgaggcggtcgcggcgcgccacgcggtcagggcagggcgcatcgaggcg
cgcgagtcgccgatcaagccgctcgacgtgctggtccagcatctggtcacggtggcgctg
ggcggcggcttcgttccggacgcattgctcgacgaggtgcgcggcgcctatgcctaccgc
acgctgaccgacgccgaatggcagtggtgcctcgacttcgtgcggcagggcggcagcagc
ctgtcggcctatccggactaccggcgcgtgcagcccgacgaggatggcgtctggcgcgtg
ccggacgttcgccttgcccgccgccatcgaatgagcgtcggcaccatcgtcagcgatgcg
acgatgcaggtgcgctactggagtcgcgcgggacgcggcggcgcctccctcggcacggtg
gaggagggctttatcgcgcggctgtcgccgggcgactgcttcctgttcggcggccggctg
ctcgagttggtgcgcgtgcaggagatgaccgcctatgtccggcgcgccgacaagggccgg
cccgtggtgccgcgctggaacgggggacggatgccgctgtcgaccgaactggccgacgcg
gtcgtcgccacgctcgaggatgccgccgcgcaaaggctcgatcccgcggatacgccggag
ctgccgttgatccagccgctggtcgacctgcagcagcgctggtcggccctgccgacgcgc
accacgctgctggccgagacgctgaactcgcgcgagggctcgcatctgttcctgtatccc
tttgccgggcgctcggtgcatctcggcctgggcagcctgctggcgtggcggctcggctcg
cagttgccgacgacgatctcggtcgccgtcaacgactacgggctggaactgctgtcggcc
gaaccgctcgactgggcgcactggctgccgctggtgctggcgcaggaacggcagcgcgat
ctggtcgccgacgtgctggccagcctcaatgccggcgagttgtcgctgcggcgctttcgc
gagatcgcacgggtatcggggctggtgttccagggctatcccggcgcgcacaagagcgcg
cggcagctgcaggcctcgtcgagcctgttctacgaggtgtttcgcaagcacgatcccgaa
aacctgctgctgggccaggccgagcgcgaggtcctgaaccaggagctcgatgccgcgcgc
ctgtcgcggacgctggatcggcttgcggagctgcggctcgatctgcgcgtgctgaaacgg
ccgacgccgctgtcattcccgctgatcgtcgaattcctgcgcgagaagctgagcaccgag
aagctggccgaccgcatcgcgcggatgctggccgacctcgaacgcgccgcgggccggaag
gggagagcggcgatgtgtccgggccgacgaaggagccgccaccggaccgcgtcgcggaga
tcgcgcgcttcggcatggccgatcatgccggccgctcgtcgtcgccctcatcatcgtcat
cgtcccggcgccggcgcccgcgcaaggtctcgaagccgctgccgccgctatgagcgtgcc
gatgtcatccgcttcttcgtccgcacggcaggtggaggtcgccggcgagacgctgtggct
gctgccggagcgcgcgctctggtggccggccgccgcgatgctgctggtggccgacgtcca
tttcggcaaggctgccgcctatcgcgcgctgggccagccggtgccggccggcaccacgcg
cgacaacctggcacggctggcggatctggcggcgcgctatccggcgcgcgagctggtctt
tctcggggattttctccatgcccgcgcgagccgcacgccggcggtgctggcggccctcgc
ggattggcgccgcgggcttccgtcgacgctgcgctgcacgctggtacgcggcaatcacga
tgcacgggccggcgatccgccgccctcgctcgatatcacggtggtcagcgaaccgtggcg
gcgcggaccattcgcgctgtgccacttgccgggagcggcgaacggcggctacgaactggc
cgggcacctgcatcccgcctatacgctgcgcgccggctccgactcggttcgtctgccgtg
cttcgtcttcgatgcgcatgccggcatcctgccggcgttcgggcctttaccggtcacgcg
ccggtcaggcgggcgccggaccggcgcctctatgtgatcggcgacgaccgggtctgggcc
gtgccggcgcgctag

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