Cupriavidus gilardii: CR3_4215
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Entry
CR3_4215 CDS
T04050
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cgd
Cupriavidus gilardii
Brite
KEGG Orthology (KO) [BR:
cgd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgd03032
]
CR3_4215 (topA)
03400 DNA repair and recombination proteins [BR:
cgd03400
]
CR3_4215 (topA)
Enzymes [BR:
cgd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CR3_4215 (topA)
DNA replication proteins [BR:
cgd03032
]
Prokaryotic type
DNA Topoisomerases
CR3_4215 (topA)
DNA repair and recombination proteins [BR:
cgd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CR3_4215 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
ALD93397
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All DBs
Position
2:complement(1603147..1603860)
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AA seq
237 aa
AA seq
DB search
MPRLRRRARRDLQRNGIPREKVLAAVLLLLDATLVRVGSRRYARQNRTYGLTTLRRRHVQ
VRGSRLRFLFTGKSGVEHDVTLQDRQLARLVRTCADLPGQHLFKYRDEDGQLREVGSDDV
NAYLRELAGEDFTAKDFRTWAGSVHALAELRKAPAAETDAARKRAVAATIKIVARRLRNT
VAVCRQCYVHPAVVDAYMNERMAACAQCRRAVAALSMDETRLLALLEAQGAAAGGRG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
ttgccgcggctgcgccggcgcgcccggcgcgacctgcagcgcaacggcattccgcgcgag
aaggtgctggccgccgtgctgctgctgctcgacgcgacgctggtgcgggtcggcagccgg
cgctacgcgcgccagaaccgcacctacggtctgaccacgctgcgccgtcgccatgtgcag
gtgcgcggcagccggctgcgcttcctgtttaccggcaagagcggcgtcgagcatgacgtg
acgctgcaggaccgccagctggcgcggctggtgcgcacctgcgcggacctgccgggccag
cacctgttcaagtaccgcgacgaggacggccagctgcgcgaggtcggttccgacgatgtc
aacgcgtacctgcgcgagctggccggcgaggacttcaccgccaaggacttccgcacctgg
gccggcagcgtccacgcactggccgagctgcgcaaggcgccggcggccgagacggacgcg
gcccgcaagcgcgcggtcgccgcgacgatcaagatcgtggcccggcgcctgcgcaatacg
gtagcggtatgccgccagtgctatgtccacccggcggtggtcgatgcctatatgaacgag
cggatggcggcctgcgcgcagtgccgtcgcgccgtcgcggcgctgagcatggatgagacc
cggctgctggcgttgctcgaagcgcagggcgcggcggcgggcggccgcggctag
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