Cupriavidus gilardii: CR3_4235
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Entry
CR3_4235 CDS
T04050
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cgd
Cupriavidus gilardii
Pathway
cgd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CR3_4235 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgd03019
]
CR3_4235 (recQ)
03400 DNA repair and recombination proteins [BR:
cgd03400
]
CR3_4235 (recQ)
Enzymes [BR:
cgd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CR3_4235 (recQ)
Messenger RNA biogenesis [BR:
cgd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CR3_4235 (recQ)
DNA repair and recombination proteins [BR:
cgd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CR3_4235 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ALD93417
LinkDB
All DBs
Position
2:complement(1638153..1639829)
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AA seq
558 aa
AA seq
DB search
MTSTLPDSIRRLLRERFDIQQLRPGQAEVIDSVLKGHDTLAVMPTGSGKSLCYQVPALCL
DGLTVVVSPLISLMQDQAEKLEGLELGPAVVNSAVGDAAADAALDSVARRDERIVLTTPE
QLQDPEVIASIQRNRVALLVVDEAHCISQWGHDFRPAYLGIPEAVRALGRPPVLALTATA
TDALIHDIAAQLDLQSLCVVKAGLYRPNLIYAVQHVAGDDERLAQVRSLVAREKGAGIVY
TATVREAERLHAGLKEAGQQVALYHGRCTAAQRRDSQAAFMTGECRVMVATNAFGMGIDK
PDVRFIIHAQLPGSLDAYYQETGRAGRDGEPARCTLLHDERDKRVQQFFLSNRYPGADTL
EQIVAQMRDIDAAEPLSLDALHQRLPNVARRKLQVALTMLCEADVAHRHKDGRYSRQPGK
SDAQAVRTIAAQYAERSDKDRATLEAMLHYARSGRCRWAMLLEYYGEHGGPERCGTCDSC
VRAAEAARHPVEPLPESKRGASAPRFAEGDRVRARRHGVGTVVATTRERVDVRFPDGTVR
RFVPRYLKREAQAASPAT
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgacctccacgctgcccgactccatccggcgcctgctgcgcgagcgcttcgacatccag
cagctgcgccccggccaggccgaagtcatcgacagcgtgctcaaggggcacgacacgctg
gcggtgatgccgactggcagcggcaagtcgctgtgctaccaggtaccggcgctgtgcctg
gacggcctgacagtcgtcgtctcgccgctgatctcgctgatgcaggaccaggccgagaaa
ctcgaagggctcgagttgggcccggcggtcgtcaacagcgcggtcggcgatgccgccgcc
gatgccgcgctggacagcgtcgcccgccgggacgagcggatcgtgctgaccacgccggaa
cagctgcaggaccccgaggtcatcgcgtcgatccagcgcaatcgcgtcgccctgctggtc
gtcgacgaagcgcactgcatctcgcaatggggccatgatttccggccggcgtatctcggc
attcccgaggcggtacgcgcgctcggacggccgccggtgctcgcgctgacggcgaccgcc
accgacgcgctgatccacgacatcgccgcgcagctggacctgcagtcgctgtgcgtggtc
aaggccggcctgtaccggcccaatctgatctatgcggtccagcatgtcgccggcgacgac
gagcggctcgcgcaggtacgcagcctcgtcgcgcgcgagaaaggcgccggcatcgtctac
acggccacggtgcgcgaagccgagcggctgcatgcgggcctgaaggaggcagggcagcag
gtggcgctgtatcacggccgctgcaccgcggcgcagcgccgcgacagccaggcagccttc
atgaccggcgaatgccgcgtgatggtcgccaccaatgcgttcggcatgggcatcgacaag
cccgacgtccgcttcatcatccatgcccagctgccgggcagcctcgatgcctactaccag
gagaccggccgtgccggccgcgacggcgagccggcgcgctgcacgctgctgcatgacgaa
cgggacaagcgagtccagcagttcttcctgtcgaaccgctatcccggcgccgatacgctc
gaacagatcgtcgcgcagatgcgggacatcgatgccgccgaaccgctgtcgctcgacgcg
ctgcatcaacggctgccgaacgtggcccggcgcaagcttcaggtcgcgctgacgatgctg
tgcgaggccgatgtcgcccaccgtcacaaggacggccgctacagccgccagcccggcaag
agcgacgcccaggcggtgcggaccatcgcagcgcagtacgccgaacgcagcgacaaggac
cgcgccacgctcgaggccatgctgcactatgcgcgcagcggccgctgccgctgggcgatg
ctgctggagtactacggcgagcacggcggcccggagcgctgcggcacctgcgacagctgc
gtgcgggcggccgaggccgcgcgccatccggtcgagccgctgcccgaatcgaagcgcggc
gcgagcgccccgcgtttcgccgaaggggacagggtgcgcgcgcgccgccatggcgtcggc
accgtggtcgcgaccacgcgcgaacgcgtcgatgtgcgcttcccggatggcacggtccgc
cgcttcgtgccgcgctatctgaagcgcgaggcccaggcggcaagccctgctacatga
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