Cupriavidus gilardii: CR3_4485
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Entry
CR3_4485 CDS
T04050
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cgd
Cupriavidus gilardii
Pathway
cgd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cgd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CR3_4485 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgd03021
]
CR3_4485 (rpoE)
Transcription machinery [BR:
cgd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CR3_4485 (rpoE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
PhyR_sigma-like
HTH_PLP
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ALD93658
LinkDB
All DBs
Position
2:1916228..1916794
Genome browser
AA seq
188 aa
AA seq
DB search
MSAAESLPSPPIDALYSDHHSWLFGWLRKKLSCPHDAADVAHDTFVRILASRDALAGVRE
PRAYLTTTAKRLIIDRARRHKLEQAYLAELEQAAASLDGFPSPEQTVAALQALAQISAAL
DGLPPKPREAFLMHYLDGQTHATIAAHLGVSTRMIHKYLVRALAHCALADDGDEDAGSAG
AAAASPAG
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgccgagtccctgccgtcaccgccgatcgatgcgctgtacagcgatcatcat
tcgtggctgttcggctggttgcgcaagaagctgtcctgcccgcacgacgcggccgacgtg
gcgcacgacaccttcgtgcggatcctggcctcgcgcgatgcgctggccggcgtgcgcgag
ccgcgcgcgtatctgaccaccacggcgaagcggctgatcatcgatcgcgcgcggcggcac
aagctggagcaggcctatctggcggagctggagcaggcggcggcctcgctggacggcttt
ccgtcgccggagcaaaccgtcgccgcgctgcaggcgctggcgcagatcagcgccgcgctc
gacggcctgccgccgaagccgcgcgaggccttcctgatgcactacctggacgggcagacg
cacgccaccatcgccgcgcatctgggcgtgtcgacgcggatgatccacaagtatctggtg
cgggcgctggcgcactgcgccttggcggatgacggtgatgaagacgcaggcagcgccggt
gccgccgcggcatcgcctgccggatga
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