Cricetulus griseus (Chinese hamster): 100689027
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Entry
100689027 CDS
T02813
Symbol
Col7a1
Name
(RefSeq) collagen alpha-1(VII) chain isoform X1
KO
K16628
collagen type VII alpha
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04382
Cornified envelope formation
cge04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100689027 (Col7a1)
09158 Development and regeneration
04382 Cornified envelope formation
100689027 (Col7a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
fn3
VWA
Pur_ac_phosph_N
VWA_2
Kunitz_BPTI
Ig_DSCAM-DSCAML_C
DUF4992
Motif
Other DBs
NCBI-GeneID:
100689027
NCBI-ProteinID:
XP_027270417
UniProt:
A0A9J7JQ56
LinkDB
All DBs
Position
4:217068431..217100556
Genome browser
AA seq
2941 aa
AA seq
DB search
MRLRLLVAALCTAEVLVGAPGVWAQSRDRVTCTRLYAADIVFLLDGSSSIGRSNFREVRG
FLEGLVLPFSGAASAQGVRFATVQYSDDPQTEFGLDALGSGGDTIRAIRELNYKGGNTRT
GAALHHVSDRVFLPHLTRPNIPKVCILITDGKSQDLVDTAAQKLKGQGVKLFAVGIKNAD
PEELKRVASQPTSDFFFFVNDFSILRTLLPLISRRVCTTAGGVPVTLPFDDTPSGPRDLV
LSEPSSQSLQVKWTAASGPVTGYKIQYTPLTGLGQPLPSERQEVNVPAGETSTRLQGLRP
LTEYQVTVVALYANSIGEAVSGTARTTAEEGLELSVQNITSHSLLVAWRRVPGVTGYRVA
WRDLSGGTTQQQDLSPGQGSVFLYHLEPGTDYEVTVSALYGHSVGPATSLTARTDSSVEQ
TLHPVILSPTSILLSWNLVPEARGYRLEWRRESGLEPPQKVVLPSDVTRHQLDGLQPGTE
YRLTLYTLLEGREVATPATIVPTGPEQPVSEVMNLQAIELSGQRVRVSWNPVPSATEYRV
TVRSTQGVERTLLLPGSQTSFNLDDVQAGISYTVRVSARVGSREGGASVLTIRRDPETQL
TVPGLRVVASDSTRIRVTWGPVPGASGFRISWRTGSGPESSQTLPPDSTATDILGLQPGT
SYHVAVSALRGREEGPPVVIVARTDPLGPVRRVHLTQAGSSSISIAWTGVPGATGYRVSW
HSGHGPEKSQLVSGEATVAEIDGLEPDTEYTVRVRTHVAGVDGAPASVVVKTAPEPVGSV
SKLQILNASSDVLRVTWVGVPGATAYRLAWGRSEGGPMRHQILPGNKDSAEIRGLEGGVS
YSVRVTALVGDREGAPVSIVVTTPPEAPTPLESLQVVQRGEHSLRLRWERVPGALGFRLH
WQPEGGQEQSLTLRPESNSYNLDGLEPATLYHIWLSVLGQTGEGPPRKVSAHTEPSPVLS
TDLRVVDISTDSVTLAWTPVPDASSYILSWRPLRGTGQEVPGAPQTLPGTSSSHRVTGLD
PGVSYVFSLAPIQRGVRGPEVSVTQKPACPHGQVDVVFVLHATRDNAHNAEAVRRALERL
VSALGPLGPQAAQVGLLSYSHRPSPLFPLNSSRDLGIILQKIRDIPYVDPSGNNLGTAVI
TAHSHLLAPNAPGRRQRVPGVMVLLVDEPLRGDIFSPIREVQASGLKVMTLGLAGADPEQ
LRRLAPGLDPIQNFFATDNGPSLDRAVSDLAVALCQAAVATQPQPEPCAVHCPKGQKGEP
GATGLQGQAGPPGPPGLPGRTGAPGPQGPPGSTQAKGERGFPGPVGPPGSPGLTGAPGSP
GIKGSPGWPGPRGEPGERGPRGPKGEPGEPGEVIGGEGPGLPGKKGDPGPSGPPGPRGPL
GDPGPRGSPGIPGTSVKGDKGDRGERGPPGPGIGGTGQGEPGLPGLPGSPGPQGPAGRAG
EKGEKGDCEDGAPGLPGQPGAPGEPGLRGTPGITGPKGDRGQTGTPGEPGEKGERGPPGP
VGPQGLPGVAGHPGVEGPEGPPGPAGRRGEKGEPGRPGDPAVGPGGAGAKGEKGDAGLPG
PRGAAGIKGEQGPPGLALPGDPGPKGDPGDRGPIGLTGRAGPTGDSGPPGEKGDPGRPGP
PGPVGPRGRDGEVGEKGVEGNPGDPGLPGKAGERGLRGAPGVRGPAGEKGDQGDPGEDGR
NGSPGPSGPKGDRGEPGPPGPPGRLVDAGIGSRDKGEPGQEGPRGPKGDPGPPGASGERG
IEGLRGPPGPQGDPGVRGPAGDKGDRGPPGLDGRNGVDGKPGAPGPPGPHGASGKAGDPG
RDGLPGLRGEHGPAGPPGPPGVPGKTGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGAPG
REGPDGPKGERGAPGDPGLRGPPGLPGQVGPPGQGFPGVPGSMGPKGDRGETGSKGEQGL
PGERGLRGEPGSLPNAERLLETAGIKVSALRDIVETWGESSGSFLPVPERRPGPKGDPGE
RGPPGKEGSIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIPGLPG
RAGSAGEAGRPGERGERGEKGDRGEQGRDGLPGLPGPPGPPGPKVAIDEQGPGLSREQGP
PGLKGAKGEPGSDGDHGPKGDKGAPGIKGDQGEPGKRGHDGSPGLPGERGVAGPEGKPGL
QGPRGTPGPAGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAVGLP
GPPGPSGLVGPQGSPGLPGQVGETGKPGPPGRDGTSGKDGERGGPGVPGLPGLPGPVGPK
GEPGPVGAPGQVMVGPPGAKGEKGAPGDLAGDLLGEPGAKGDRGLPGPRGEKGEAGRAGE
PGDPGEDGQKGAPGLKGLKGEPGIGVQGPPGPTGPPGMKGDVGSPGAPGVVGFPGQTGPR
GETGQPGPVGERGLAGPPGREGAPGPLGPPGPPGSVGAPGASGLKGDKGDPGTGLPGPRG
ERGEPGVRGEDGHPGQEGPRGLMGPPGSRGDRGEKGDTGPAGLKGDKGDSAVIEGPPGIR
GAKGDMGERGPRGIDGDKGPRGDNGNPGDKGSKGEPGDKGSAGSIGVRGLPGPKGETGAT
GIPGEPGAPGKDGAPGFRGDKGDIGFMGPRGLKGERGMKGACGLDGEKGAKGEAGFPGRP
GLAGRKGDAGEPGVPGQSGSPGKEGLIGPKGDRGFDGQSGPKGDQGEKGERGPPGVGGFP
GPRGNDGSSGPPGPPGGVGPKGPEGLQGQKGERGPPGESVVGAPGAPGAPGERGEQGRPG
PAGPRGEKGEAALTEDDIRGFVRQEMSQHCACQGQFIASGSRPLPSYAADTAGPQLHHVP
VLRVSHVEEEGQVPPEDDDDFSEYSVYSVEDYHDPEVPWDGDGDIKGWDQRGSDPCSLPL
DEGSCTAYTLRWYHRAVPGGTACHPFVYGGCGGNANRFGTREACERRCPPQVVHSQRTGA
A
NT seq
8826 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcggctcctagtcgctgcgctctgcactgccgaggtcctggtgggggcgcct
ggagtgtgggcccagtccagagatagagtgacctgcacacgcctttacgccgctgacatt
gtgttcttactcgatggctcgtcatccattggccgcagcaacttccgcgaagtgcgagga
ttcctggaggggctggtgctgcctttctcaggggcggccagtgcgcagggcgtacgattt
gctacagtgcagtacagtgatgacccacagacagaatttggtctggatgcactcggctct
ggaggtgacaccatccgtgccattcgtgaactcaactataagggtggcaacacgcgcacg
ggggccgctcttcaccatgtttctgaccgtgtcttcttgccccacctaacacgacctaac
atccccaaggtctgcatcctgatcacagatgggaagtcccaagacttagtggacacagca
gcccagaaactgaagggacagggagtcaagctgtttgctgtgggaatcaagaatgctgac
cccgaggagctgaagcgggttgcttcacagccaaccagtgacttcttcttctttgtcaat
gacttcagcatcttgaggacactgttgcctctcatttcccggagggtgtgcacaactgct
ggtggtgtgcctgtgaccctgccttttgatgacactccatctgggccccgggaccttgtg
ctgtctgagccaagtagtcagtccttgcaagtaaagtggacagcagctagtggcccagtg
actggctacaagattcagtacacccctctgacagggctgggacagccgctgccaagcgag
cgacaggaggtgaacgtcccagctggtgagaccagcacgagactacagggtctccggcca
cttactgaataccaagtgactgtggttgccctctacgccaacagcatcggggaggccgtg
agtggcacagctcggaccactgccgaggaagggctggagctgagtgtccagaacatcaca
tcccacagccttctggtggcctggaggagagtcccaggtgtcactggctaccgtgtagca
tggcgggacctcagtggtgggacaacacagcagcaggacctgagtcctggacaggggtca
gtatttttatatcacttggagccgggcacggactatgaggtgactgtgagcgccctctat
ggccacagtgtggggcctgccacttctctgactgcccgcactgactcctcggtggagcag
accctgcaccctgtcatcttgagccccacatccatcctcctttcctggaacttggtgcct
gaggcccgtggctaccggctagagtggcgtcgtgagagtggcttggaaccaccacagaaa
gtggtactgccctctgatgtgacccgccaccagttggatgggttgcagcctggcactgag
tatcgtctcacactctatactctgttggagggccgggaggtggccactcctgcaaccata
gttcctactgggccagagcagccagtgagtgaggtgatgaatttacaagccatagaactg
tctgggcagcgggtgcgagtgtcttggaacccagtccccagtgccactgagtaccgtgtc
actgtgcgcagcacccagggggttgagcggaccctgttgcttcctgggagtcagacatcc
tttaacttagatgacgttcaagctgggattagctacacagtgcgggtgtctgctcgagtg
ggctctcgtgagggtggtgccagcgtcctaaccatccgcagagatccagaaacccaactt
actgttccaggactgcgggttgtggcatcagattcaacaagaattagggtgacctgggga
cctgtacctggagccagtggattccggattagctggaggacaggcagtggtccagagtcc
agccagacactgcccccagactctactgccacagacatcctggggctgcagcctggaacc
tcttatcatgtggctgtgtcagcacttcgagggagagaggaaggtccccctgtggtcatc
gtggctcgaactgatccactgggcccagtgaggagagtccatttgactcaggctggcagc
tcatctatcagcattgcctggaccggggttcctggagccacaggatacagggtttcctgg
cactctggccatggtccagagaaatctcagttggtttctggggaagccacggtggctgaa
attgatgggctggagccagacacagagtatacagtgcgtgtgcgaacccacgtagctggt
gtggatggagcccctgcctctgtggttgtgaagactgcccctgagcctgtgggcagtgtg
tcaaaactgcaaatcctcaatgcctccagtgatgttctacgggtcacttgggtgggagtc
cctggagccacagcctatagactggcatggggacggagtgaaggtggccctatgcgacac
cagatactcccgggaaacaaagactctgcagagatccggggtctcgaaggcggagtcagc
tactcagtgagagtgacagcacttgttggggaccgagagggtgcaccagtctctattgtc
gtcaccacaccgcctgaggcgccaacacctctggagagccttcaagtagtgcagcgcgga
gagcactccttgaggctgcgctgggagcgggtacccggagcactgggcttccgtctgcac
tggcaacctgagggtggccaggagcagtccctgaccttgagacctgagtctaacagctac
aacctggatggactggagccagcaacactgtaccacatatggctgagtgtcctggggcag
actggagaggggccccctaggaaggtgtctgcacacacagagccctctcctgtcctgagc
actgacctgcgtgtggtggacatctctactgactcagtgactttggcctggaccccagtg
cctgatgcatccagctacatcttgtcctggcggccactcagaggaactggccaggaagtg
cctggggctccacagacactgccagggacctcaagctcccacagggtgacaggcctagac
cctggtgtttcctatgtcttctctctggcacctatccagaggggtgtccgaggtcccgag
gtctctgtcacacagaagccagcgtgtccccatggccaggtggatgtggtgttcgtgctg
catgccactcgagacaatgctcacaatgcagaggctgtaaggcgggccctggagaggctg
gtgtctgcactcgggcctcttggtccacaggctgctcaggttggcctactgtcctacagt
caccggccctccccgttgttcccgctgaatagttctcgtgatcttggcatcatcttgcaa
aagatccgggacatcccctatgtggacccaagtggaaacaacctaggcacagctgtgatc
acagctcacagccacctcttggcacccaatgctcctggtcgccgtcagcgagtgccagga
gtgatggtcttgttagtggatgagccactgagaggggacatattcagccccatacgtgag
gtccaggcttctgggctcaaggtgatgacgttgggcttggcgggagctgacccagagcag
ctgcgtcgcttggcaccaggcctggaccccatccagaacttctttgccacagataatggc
ccaagcttggaccgagcagtcagtgatctggcagtagctctgtgtcaggcagctgtggcc
acacagccacaaccggagccttgtgctgtgcattgtccaaagggtcagaagggggagcct
ggagcaacgggtctgcaaggacaggctggacctcctggtccccccggtctcccgggtagg
accggtgctcctggcccacaaggtccccctggaagtacccaggcgaaaggagagaggggc
tttcctggcccagtagggcctccaggcagccctggcctcactggtgctcctgggtctcct
ggcattaagggctccccagggtggcctggccctcgtggggaaccgggagagcgagggcct
cggggcccaaagggggagccgggggagcccggggaagtcattggaggtgaagggccaggg
cttcctggaaagaaaggggaccctggaccttcggggccccctggacctcgtggccctttg
ggggacccaggaccccgtggctccccagggattcctggaacatcagtgaagggtgacaaa
ggtgatcgtggggaacggggtcccccaggaccaggtattggtggcactggacaaggcgag
cctggacttccgggtcttcctggaagccctggaccccaaggcccagcaggccgtgctgga
gagaaaggagagaagggtgactgtgaggatggagccccaggccttccaggacaacctggg
gccccaggtgaaccgggcctacggggaactcctggaattactgggcccaaaggtgaccgg
ggacagacagggaccccgggtgagcccggagaaaagggtgaacggggaccgcccggtcca
gtgggaccccaggggcttcccggggttgctggccatcctggagtggagggtcctgagggg
ccaccaggacccgctggccgtagaggagaaaagggagagcctggtcgccctggagatcct
gcagtgggtcctggtggtgctggagccaaaggagaaaagggagatgctgggcttcctggg
cctcgaggagctgctggaatcaaaggggaacaaggcccacctgggttggcgcttcctgga
gaccctggccccaaaggagaccctggagaccggggtcccattggcctcactggcagagca
ggacccacaggtgactcggggcctcctggagagaagggagatccaggacgaccagggccc
ccaggacctgttggcccccggggaagagatggtgaagttggagaaaaaggtgtcgaggga
aacccgggtgacccaggtttgcctggaaaagcaggcgagcgtggccttcggggcgcacct
ggggtccgggggcctgcgggtgagaaaggtgaccagggagaccctggagaagatggacgg
aatggcagccctggaccatctggacccaagggtgaccgtggggagccgggccccccgggt
ccccctggacggctggtggatgcaggaattggatccagagacaagggagagcctggacag
gaaggtcctcgaggacccaagggtgaccctggcccccctggagcctctggagaaaggggc
attgaggggcttcggggaccccccggcccacagggagacccaggtgttcgaggccctgca
ggagacaagggtgatcggggccccccagggctggatggccggaatggggtggatgggaag
ccaggtgcacctggccccccagggccacatggtgcttcaggcaaagccggggaccctggg
agagatgggcttccaggccttcgaggagaacatggccctgctggtccccctggccctcct
ggagtacctggaaagacaggcgaggatggcaaacctggcctaaatgggaaaaacggagaa
cctggagaccctggagaagatggaaggaagggggaaaagggagattctggtgcccctgga
agagaaggccctgatggtcccaaaggtgaacgtggagctcctggtgatcctggactgcgg
ggtcctcccggtctcccaggacaggtcggtccccctggccagggtttccctggtgtccca
ggaagtatgggtcccaagggtgaccgtggagagactggatccaaaggggaacagggcctt
cctggagaacgtggcctacgaggagaacctgggagcttgccgaatgcagagagactactg
gaaacagctggcatcaaggtgtcggccctgcgggacattgtggagacctggggtgagagc
tctggcagcttcctccctgtgcctgaacggagacctggccccaagggggaccctggtgag
cgaggccctcctggcaaggagggttccatcggctttcctggagagcgtgggctgaaggga
gaccgtggagaccctggccctcaggggcctcctggtctggcccttggtgagaggggccca
cctggaccacctggccttgctggggaacctggaaagcctggcattcctggcctcccaggc
cgggctggtagtgctggggaggcaggacggccaggagagaggggagaacgtggagagaaa
ggagaccgtggagagcagggcagagatggccttcctggcctccctggaccacctggccct
cctggccccaaggtggccatcgatgagcaaggtcctggactctctagagaacaagggccc
cctgggctcaagggtgctaagggggagccaggtagtgatggtgaccacggacccaaagga
gataagggtgcaccaggcattaaaggagaccagggagagcctgggaagaggggtcatgat
ggcagcccgggtctgccgggagagcgtggtgtggctgggccagaagggaagccgggtctt
cagggcccaagggggacccctggcccagcgggtggccatggagaccctggaccacctggt
gccccgggtcttgctggccctgcaggaccccagggaccttcaggcctgaagggggaacct
ggagagacaggacccccaggacggggtctgcctggacctactggagctgtgggacttcct
ggccctcctggcccttcaggccttgtgggtccacaagggtcaccaggtttgcctggacaa
gtgggggagacggggaagccaggacccccaggtcgtgatggtaccagtggaaaggatgga
gagaggggaggtcctggtgtgccagggttaccaggtctgcctggccctgttggacctaaa
ggagaacctggacctgtgggggcccctggacaggtgatggttgggccccctggagcaaaa
ggcgagaagggtgccccaggagacctggctggagacctgctgggtgagccgggagccaaa
ggtgaccgaggactgccaggaccaaggggtgagaagggtgaagctggccgtgcaggagag
cctggagaccctggggaagatggtcaaaaaggggctccaggactcaaaggtctcaagggt
gagccaggaattggggttcagggcccccctgggccaactggtcctccagggatgaagggc
gacgtgggctccccaggagctcctggtgttgttggattccctggtcagacaggacctcga
ggagagacaggccagccagggcctgttggggagaggggtctggcaggccctccagggaga
gagggtgccccaggtcccttgggaccacctggaccaccagggtcagtgggagcacctggc
gcctctggactcaaaggagacaagggagacccaggaacagggctgcccgggccccgaggc
gagcgtggtgagccaggtgtccggggtgaagatggccaccccggccaagaaggacctcga
ggactcatggggcctcctggcagcaggggagaccgaggggagaagggtgacactggacct
gcagggctaaagggtgacaagggtgactcagctgtgattgaggggcctccagggatacga
ggtgccaaaggggacatgggtgaacgaggacctcgaggaatagatggtgacaaaggacct
cggggagacaatgggaatcctggtgacaagggctccaaaggagagcctggtgacaaaggc
tcagctggatcaattggagttcgaggactcccaggacccaagggtgagacaggtgccaca
gggatccctggtgagccgggagccccaggaaaggatggagcccctggtttccgaggagac
aaaggagatattggcttcatgggtccccggggtctaaagggtgagagaggaatgaaggga
gcctgtggccttgatggagaaaaaggagctaagggagaagctggttttcctggccgccct
ggattggcaggacgcaaaggagacgcaggggagcctggtgtgccgggtcagtctgggtct
cctggcaaagagggcctgattggtcccaagggtgacagaggctttgatgggcagtcagga
cccaagggtgaccagggtgagaaaggagagagggggcccccaggagttgggggcttccca
ggtcccagaggaaatgatggctctagcggtcccccagggccacctggtggtgttggtccc
aaaggccctgaaggacttcagggtcagaagggtgagagaggtccccctggagagagtgtg
gtgggggctcctggtgctcctggtgcccccggtgagagaggggagcaggggcgaccagga
cctgctggccctcgtggggagaaaggagaagctgcactgactgaggatgacattcggggc
tttgtacgtcaggagatgagtcagcattgtgcctgccagggccagtttattgcgtctgga
tcacgacccctccccagctacgctgcagatacagctggtccccagctccaccatgtgcct
gtgctccgggtctctcatgtagaggaggaaggccaggtaccccctgaagatgatgacgac
ttctctgagtactctgtgtattctgtggaggactaccacgaccctgaagttccttgggat
ggtgatggggatatcaagggctgggaccagagaggttcagacccctgctccctaccactg
gatgagggctcctgtactgcctataccctgcgctggtaccatcgggctgtgcctggtggc
acagcctgccatccctttgtctatggcggctgtggagggaatgccaaccgttttggaacc
cgtgaggcatgtgagcgccgctgcccaccccaagtagtccacagccaaagaacaggtgct
gcctag
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