Cricetulus griseus (Chinese hamster): 100689206
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Entry
100689206 CDS
T02813
Symbol
Trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04360
Axon guidance
cge04724
Glutamatergic synapse
cge04726
Serotonergic synapse
cge04929
GnRH secretion
cge04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100689206 (Trpc1)
09154 Digestive system
04972 Pancreatic secretion
100689206 (Trpc1)
09156 Nervous system
04724 Glutamatergic synapse
100689206 (Trpc1)
04726 Serotonergic synapse
100689206 (Trpc1)
09158 Development and regeneration
04360 Axon guidance
100689206 (Trpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cge04040
]
100689206 (Trpc1)
Ion channels [BR:
cge04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100689206 (Trpc1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
100689206
NCBI-ProteinID:
XP_027266728
UniProt:
A0A8C2LTF6
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Position
4:complement(204331904..204387663)
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AA seq
809 aa
AA seq
DB search
MGAPPPSPGLPPSWAAMMAALYPSTDLSGVSSSSLPSSPSSSSPNEVMALKDVREVKEEN
TLNEKLFLLACDKGDYYMVKKILEENSSGDLNINCVDVLGRDAVTITIENESLDILQLLL
DYGCQSADALLVAIDSEVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVI
LAAHRNNYEILTMLLKQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPA
LIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEV
ILNHTSSDEPLDKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRR
KPTCKKIMTVLTVGIFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLY
SLVYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNS
LYLATFALKVVAHNKFHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILG
PLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGYTSKEQKDCVGIFCEQQSNDTF
HSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAM
LHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWVCS
HTSKGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNEL
RQDLSKFRNEIRDLLGFRTSKYAMFYPRN
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgggggccccgcctccgtctcctggcctgcccccgtcgtgggccgcgatgatggcggcc
ctgtacccgagcacggacctctcgggcgtctcctcctcctccctgccttcttccccatcc
tcctcgtcgcccaacgaagtgatggcgctgaaggatgtgcgggaggtgaaggaggagaac
accctgaatgagaagcttttcttgctcgcgtgcgacaagggtgactattatatggttaaa
aagattttggaggaaaacagttcaggtgacttgaacataaattgcgtagatgtgcttggg
agagatgctgttaccataactattgaaaacgaaagcttggatatactacagctgcttttg
gactacggttgtcagtccgcagatgcacttttggtggcaatcgactctgaagtagtggga
gctgttgatatactacttaatcatcgaccaaaacgatcatcaagaccaactatagtaaaa
cttatggaacgaattcagaatcctgaatattcaacaacaatggatgttgcacctgtcatt
ttagctgctcatcgtaacaactatgaaattcttaccatgcttttaaagcaggatgtgtct
ttgcccaagccccatgcagttggctgtgaatgcacgctgtgttctgcaaaaaacaaaaag
gatagcctcagacattccaggtttcgtcttgatatctatagatgtctggccagtccagct
ctaataatgttaacagaggaggatccaatcctgagagcatttgaacttagtgctgactta
aaggaactcagcctcgttgaagtggaattcaggaatgattatgaagagctagcccgtcag
tgcaaaatgtttgctaaagatttgcttgcacaagcccggaattcacgtgaactggaagtt
atcctaaaccatacatctagtgatgagcctcttgacaaacggggactattggaagaaaga
atgaatttaagtcgtctaaaacttgctatcaaatataaccagaaggagtttgtctcccag
tcaaattgccagcagttcctgaacaccgtttggtttggacaaatgtcaggttaccgccgt
aaacccacctgtaagaagataatgactgttttgacagttggcatcttctggccagttttg
tccctatgttatttgatagctcccaaatctcaatttggcagaatcattcacacacctttt
atgaaatttattattcatggagcatcatatttcacattcttgctgctcctaaatctctac
tcacttgtctacaatgaagacaagaaaaatacaatggggccagcccttgagagaatagac
taccttctcatactgtggattattgggatgatttggtcagacattaagagactctggtat
gaagggttagaagactttttagaagaatcacgtaaccagctcagctttgtcatgaattcc
ctctacctggcaacctttgccctcaaagtggtggctcacaacaagtttcatgactttgct
gaccggaaggactgggatgcattccaccccacacttgtagcagaagggctttttgcattt
gcaaatgttctgagttaccttcggctcttttttatgtatacaaccagctctattttgggt
ccactgcagatttcaatgggacagatgttacaagattttgggaaatttctggggatgttc
cttcttgttctgttttccttcacaattggactgacacagctctatgacaaggggtacact
tccaaagagcagaaggactgtgttggcatcttctgtgaacaacaaagcaatgataccttc
cactcgttcattggcacctgctttgctttgttctggtacatcttctccttagcacatgtg
gccatctttgtcacaaggtttagctatggagaagaactgcagtccttcgttggagctgtg
attgttgggacgtacaacgtcgtggttgtgattgtgcttacaaagctgctggtagccatg
cttcacaaaagctttcagttgatagcaaatcatgaggataaagaatggaagtttgctcga
gcaaagctgtggcttagctactttgatgacaaatgtacactgcccccgcctttcaacatt
attccttcaccaaagactatctgctatatgatcagtagtctcagtaagtgggtttgctct
catacatcaaaaggcaaggtcaaacggcaaaacagtttgaaggagtggagaaacttgaaa
cagaagagagacgagaactaccagaaagtgatgtgctgcctagtgcatcgttacttgaca
tctatgagacagaagatgcagagtacagaccaggcaaccgtggagaatctcaatgaactg
cgccaagatctgtcaaaatttcgaaatgaaataagggatttgcttggctttcggacttct
aaatatgctatgttttatccaagaaattaa
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