Cricetulus griseus (Chinese hamster): 100689424
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Entry
100689424 CDS
T02813
Symbol
Npc1
Name
(RefSeq) NPC intracellular cholesterol transporter 1 precursor
KO
K12385
Niemann-Pick C1 protein
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cge04142
Lysosome
cge04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
100689424 (Npc1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100689424 (Npc1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
100689424 (Npc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cge02000
]
100689424 (Npc1)
Transporters [BR:
cge02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
100689424 (Npc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
100689424
NCBI-ProteinID:
NP_001233616
UniProt:
Q9JLG3
LinkDB
All DBs
Position
2:224089436..224138898
Genome browser
AA seq
1277 aa
AA seq
DB search
MSARHPALGLLLLLLCPAQVFSQSCVWYGECGIAFGDKKYNCKYSGPPKPLPKDGNDLLQ
ELCPGFFFGNVSLCCDVQQLQTLKSNLQLPMQFLSRCPSCFYNLMTLFCELTCSPHQSQF
LNVTATEDYVDPKTQENKTNVKELEYYIGQSFANEMYNACRDVEAPASNEKALGILCGKD
ASACNATNWIEYMFNKNNGQAPFTITPIFSDLPILGMEPMRNATKGCNESVDEVTGPCSC
QDCSIVCGPKPQPPPTPVPWRILGLDAMYVIMWVTYMAFLFIFFGGLLAVWCHRRRYFVS
EYTPIDSNIAFSSNTSDKGEASCCDPLGAAFDDCLRRMFTKWGAFCVRNPTCVIFFSLVF
ITACSSGLVFVRVTTNPVELWSAPHSRARLEKEYFDKHFGPFFRMEQLIIQAPNTSEHIY
EPYPSGSDVSFGPPLNKEILHQVLDLQIAIESITTSYNNKTVTLQDICVAPLSPYNKNCT
IISVLNYFQNSHSVLDHQVGDDFYVYADYHTHFLYCVRAPTSLNDTSLLHDPCLGTFGGP
VFPWLVLGGYDDQNYNNATALVITFPVSNYYNDTEKLQRAQAWEKEFIDFVKSYKNPNLT
ISFIAERSIEDELNRESNSDVFTIAISYAIMFLYISLALGHIKSCSRLLVDSKISLGIAG
ILIVLSSVACSLGVFSYMGMPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQEETL
DQQLGRILGEVAPTMFLSSFSETSAFFFGALSSMPAVHTFSLFAGLAVLIDFLLQITCFV
SLLGLDIKRQEKNRLDILCCVGGTDNGRGIQASESYLFRFFKNSFAPFLLKDWLRPIVIA
VFVGVLSFSIAVMNKVEIGLDQSLSMPNDSYVIDYFKSLGQYLHSGPPVYFVLEEGHDYT
THKGQNMVCGGMGCDNDSLVQQIFNAAELDNYTRIGFAPSSWIDDYFDWVAPQSSCCRLY
NATHQFCNASVIDPTCIRCRPLTPEGKQRPQGKEFMKFLPMFLSDNPNPKCGKGGHAAYS
SAVNIIGDDTYVGATYFMTYHTVLKTSADYIDAMKKAQLVARNITETMNSKGSNYRVFPY
SVFYVFYEQYLTIIDDTIFNLSVSLGSIFLVTLVVLGCELWSAVIMCITIAMILVNMFGV
MWLWDISLNAVSLVNLVMSCGISVEFCSHITRAFTMSTKGSRVSRAEEALAHMGSSVFSG
ITLTKFGGIVVLAFAKSQIFEIFYFRMYLAIVLLGATHGLIFLPVLLSYVGPSVNKAKRH
TTQERYKGTERERLLNF
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcgccacccggccctcggcctcctcctgctgctgctgtgccctgcgcaggtg
ttttcacaatcctgtgtttggtatggagagtgtggaattgcatttggagataagaagtac
aactgtaaatattctggtccaccaaaaccattaccaaaggacggaaatgacttgctacag
gaactctgcccaggattcttcttcggcaatgttagtctctgctgtgacgttcaacagctt
cagactctgaaaagcaacctacagctgcccatgcaatttctgtccagatgtccatcatgt
ttttataacctaatgaccctgttttgtgagctaacatgtagccctcaccagagtcagttt
ctgaatgtgacagcaactgaagattatgttgatcctaagacacaggagaataaaacaaat
gtaaaggaattagagtattatattggacaaagctttgcgaatgaaatgtacaatgcctgc
cgtgatgtggaggcccctgcaagtaatgagaaggccttaggaatcctgtgtggaaaggat
gctagtgcctgcaatgccaccaactggattgagtacatgttcaataaaaacaatggacag
gcgccatttaccatcactcccattttttcagatcttccgatccttgggatggaacccatg
agaaatgccaccaaaggctgcaacgagtctgtagatgaggtcacagggccatgtagctgc
caggactgctccattgtctgtggccccaagccccagcctccaccaactcccgtgccctgg
aggatcttgggcttggatgccatgtatgtcatcatgtgggtcacatacatggcatttctg
tttatattttttggaggacttttggcagtgtggtgccacagaaggcggtattttgtgtct
gagtacacgcccattgacagcaatatagccttttcttcaaacaccagtgacaaaggggag
gcctcatgctgtgacccactaggtgcagcatttgatgactgtctgagacgcatgtttaca
aagtggggagctttctgtgtccgaaaccccacctgtgtcattttcttctcattggtcttc
atcactgcatgttcttccgggctggtgtttgtccgggtcaccaccaaccctgtggagctc
tggtcagcccctcacagtcgggcccgcttggagaaggagtactttgataagcactttggg
cctttctttcgcatggagcaacttattatccaggcccctaacaccagtgagcacatctat
gagccgtacccctcagggtccgatgtgtcctttgggcctccactgaacaaagagattctc
caccaggtgcttgacttacagattgctattgaaagtattactacatcttacaacaataag
accgtgacacttcaagacatctgtgtggcccctctctctccgtacaacaagaactgcacc
attataagtgtcttaaattacttccagaacagccattctgtgctggaccaccaagtaggc
gatgacttctatgtatatgccgattaccacacacactttctgtactgtgtacgggctccc
acctctctgaatgacaccagtttgctccatgatccttgcctgggtacatttggaggacct
gtgttcccatggcttgtgctgggtggctatgatgatcagaactataataatgccactgcg
cttgtgatcaccttccctgtcagtaattactataacgacacagagaagctccagagggcc
caggcctgggagaaagagtttattgattttgtgaaaagctacaagaatcccaatctgacc
atttccttcattgctgagagaagcattgaagatgaactcaatcgggaaagtaacagtgac
gtcttcactattgccatcagctacgccatcatgtttctgtatatttcccttgccttggga
cacataaagagctgtagcagacttctggtggattctaaaatctcactgggcattgcgggg
atcctgatagtactgagctcagtggcctgctccctgggcgtcttcagctacatggggatg
ccactgaccctcattgtcatcgaagtcatcccattcttggtgctggctgtcggggtggat
aacatcttcattctagtgcagacctaccagagagacgagcgtcttcaggaggagacactg
gatcagcaactgggcaggatccttggggaagtggcccctacaatgttcctttcttccttc
tctgagacctcggcatttttctttggggcactgtcctcgatgccggctgtccacaccttc
tctctgtttgcgggcttggcggtcctcattgacttcctccttcagatcacctgctttgtg
agcctcttggggttagatattaagaggcaagagaaaaatcggctggacatcctgtgctgt
gtgggaggcactgacaatggaagaggcatccaggcctctgagagctacctgtttcgcttc
ttcaaaaactcctttgccccctttctgctgaaggactggctgcgaccaattgtgatagcc
gtatttgtgggtgttctgtcattcagtattgcagtcatgaacaaagtggaaatcggattg
gatcagtctctttcaatgccaaatgattcttatgtgattgactatttcaaatcgctcggt
cagtacctgcactcgggtccacctgtgtacttcgttctggaggaaggtcatgactacact
acccacaaggggcagaacatggtgtgcggcggcatgggctgtgacaatgactccctggtg
cagcagatatttaacgcagctgagctggacaactatacccgcataggctttgccccctca
tcctggatcgatgactactttgactgggtcgcgccgcagtcctcctgctgtagactctac
aacgccactcaccagttttgcaatgcttctgtgattgacccaacctgcatccgctgcaga
cctctgactccagagggcaaacagaggccacaggggaaagagttcatgaaatttctgccc
atgttcctttccgataaccccaaccccaaatgtggcaaagggggacatgctgcttacagt
tcagctgttaatatcatcggagatgacacttacgttggggccacttacttcatgacctac
cacacggtccttaagacctctgctgactatatcgatgctatgaaaaaagcccaacttgta
gccaggaacatcacagaaaccatgaattctaaggggagtaactaccgagtgttcccatac
agtgtgttctacgtcttctacgaacagtacctgaccatcattgatgacaccatctttaac
ctcagtgtgtctctgggctccatatttctggtgaccttggtggttctgggctgtgaactg
tggtctgcagtcatcatgtgtatcaccatagccatgatcctggtcaacatgttcggggtt
atgtggctgtgggacatcagtctgaatgctgtgtccttagtcaacctggtgatgagctgt
ggcatttctgtggagttctgcagccatataacaagagcattcaccatgagtaccaaagga
agccgagtaagccgagcagaagaggcgctggcccacatgggtagttctgtattcagcgga
atcacacttacaaaatttggagggattgtggtgttggcctttgctaaatctcaaattttt
gagatattttactttaggatgtacttagccattgtcttactcggagccactcacggactg
atatttcttcctgtcttactcagctacgtaggaccatcggtaaataaagctaaaagacac
accactcaagagcgatacaaagggaccgagcgagaacggctcctcaatttttag
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