Cricetulus griseus (Chinese hamster): 100750750
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Entry
100750750 CDS
T02813
Symbol
Rc3h1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cge03000
]
100750750 (Rc3h1)
04121 Ubiquitin system [BR:
cge04121
]
100750750 (Rc3h1)
Transcription factors [BR:
cge03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
100750750 (Rc3h1)
Ubiquitin system [BR:
cge04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100750750 (Rc3h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
100750750
NCBI-ProteinID:
XP_027273050
UniProt:
A0A8C2MQB7
LinkDB
All DBs
Position
5:complement(31088370..31159270)
Genome browser
AA seq
1128 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQIPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAPILPDE
SAVDLSSRKPPALPNGIVSGGTVTQLIPRGTDPSYDSSLKPGKLDHLSSSAPGSPPDLLE
SAPKNISALPVNPHPVPPRGPTDLPPMPVTKPIQMVPRGSQLYPPQQADVYYQDPRGTAP
AFEPAPYQQGMYYPPPPCVSRFVRPPPSAPEPGPPYLDHYPPYLQDRVINSQYGTQPQQY
PPMYPPHYDGRRVYPAQSYTREEIFRESPIPIEIPPAAVPSYVPESRERYQQVEGYYPVA
PHPAQIRPSYPREPPYSRLPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLP
PAFHQEEFLDEEFKVAGKYKANDYSQYSPWSCDTIGSYIGTKDAKPKDVAAGSVEMMNVD
SKGMRDQRLDLQRRAVETSDDDLIPFGDRPTVSRFGAISRTSKTLYQGAGPMQAMAPQGA
PTKPISISDYSPYGAHGGWGDSPYSPHPNIPPQGHFIEREKMSMAEVVSHGKPLLSAERE
QLRLELQQLNHQISQQTQLRGLEAVNNRLVLQREVNTLAGQPLPPPLPPKWPGMISSEQL
SLELHQVEREIGKRTRELSIENQCSMDTKSKLGTSKQAENGQPEPQNKVPAEDLTLTFSD
VPNGSALTQENLSLLSNKTSSLNLSEDPEGGGDNSDSQRPGVTSSSAP
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggatttcctttcctgcccaatttgcactcagact
ttcgacgaaacaattcgaaagcccatcagtttgggctgtggccatactgtctgcaaaatg
tgcctgaataaactccaccgtaaggcttgcccatttgaccagaccactatcaatacagac
attgagctcctccctgtgaactcagcattactgcagctagtgggtgctcagatccctgag
caacagcccattactttgtgtagtggggttgaagatacaaagcattatgaggaagccaag
aaatgtgtagaagaattagcgttgtacctgaaaccactcagcagtgctagaggagtgggt
ctaaacagcactactcagagtgttctgagtcgcccaatgcagaggaaacttgtgactcta
gtccactgccagctagtggaagaagaaggcaggatccgtgctatgagggctgctcgatct
ttaggtgaacgcacagttacagagctcattctccagcaccaaaatcctcagcaactctcc
tcgaatctctgggcagcagtcagagctaggggctgccagttccttggaccagcaatgcag
gaggaagctctgaaacttgtcttgctagctttggaagatggttctgctttgtcacggaaa
gtgttggttctctttgtggtgcaaagactggagcctcgttttcctcaagcctctaaaacc
agcattggccatgttgttcagctcctttacagagcctcctgcttcaaggtcaccaaacgt
gatgaagactcttctttgatgcagctgaaagaagaattcaggacttatgaagctctgcga
cgagaacatgactcccagatagtgcaaattgctatggaagcaggcttaaggattgcacca
gaccagtggtcctctttgctttatggagaccagtctcacaaatctcatatgcagtccatt
attgacaagttgcagacccctgcctcttttgcacagagtgttcaggagctaactattgct
ctccagcggactggagacccagcaaacttgaaccgactaagaccccacttggagctacta
gcaaatattgaccctagtccagatgcccctcctccaacatgggaacaactagaaaatggc
ctggttgctgtacgtacagtagtacatggactagtagattatattcagaaccacagcaaa
aaaggagcagaccaacagcagcctccacagcatagcaaatacaaaacatacatgtgtcga
gatatgaaacagaggggaggatgccctcgtggggccagctgtacatttgcacactcacaa
gaagaactggaaaaatttcgtaaaatgaacaaacgtctggttcccagaagacctctgagt
gcgtctttgggtcaacttaatgaggtgggcctgccttcagcacctatacttcctgatgaa
agtgcagtggacttgtccagcaggaaaccgcctgcactaccaaatggaattgtgtcaggg
ggcacagtgacacagctgattccacgtgggacagaccccagctatgattctagtctgaag
ccagggaagctggaccacctgagcagcagtgctcctgggtcccctcctgacctgctggaa
tctgcccctaagaatatttctgccttacctgtgaatccacatcctgtacctccaagggga
ccaacagatctgcctcccatgcctgttaccaaaccaattcagatggtacctcgaggttct
cagttatatccaccacaacaagcggatgtttattatcaggatcctcgaggaactgcccca
gcgtttgagccagcaccttatcagcagggtatgtactatcctccaccaccatgtgtgtcc
cgcttcgtaagacctccaccatctgctcctgaacctggtcctccatacttggatcattat
ccaccctacctccaagatcgtgtcataaactctcaatatggcacacagccacaacagtac
ccacctatgtacccacctcactatgatggccgtcgtgtataccctgctcaatcttataca
agagaggagattttccgggaaagccccatacccattgagattccacctgcagcagtacca
tcctatgtgcccgagtccagagagcgataccaacaggtagagggttactacccagtggct
cctcatccagctcagatcagaccttcataccccagggagcctccttatagtcggcttcct
cctccccagccccatcctagtctggatgagttacatcgtagacggaaggaaataatggcc
caactcgaggaaagaaaggttatctctccacctccttttgcgccttcaccaacattgcct
cctgcattccatcaagaggaatttttggatgaagaattcaaggtagctgggaagtacaaa
gcaaatgattatagccagtattcaccttggtcatgtgataccatcggctcctacattgga
accaaagatgcaaaacccaaagatgtggcagcagggagtgtggaaatgatgaatgtagac
agtaaaggaatgagagaccagagattggatcttcagagaagagcagtggaaactagtgat
gatgacctcatcccatttggagaccgaccaacagtatctcggtttggtgccatctctaga
acatccaaaacactgtatcagggtgctggtccaatgcaggccatggcgccacagggagca
cccacaaaacctattagcatttcagattacagtccatacggagctcatggtggctgggga
gattctccatactcacctcatccaaacatacctcctcagggacacttcatcgagagggag
aaaatgtccatggcagaagtggtcagtcatggaaaaccccttctgtctgctgaaagagaa
caactacggctagaattgcagcaactgaatcatcagatcagccaacagacccagctacgt
gggctagaggctgttaataaccggctggtgttacagagggaggtgaacaccctggcaggt
caaccactgccccctccactgcctccaaaatggcctggaatgatctcaagtgagcagcta
agcttggaactacatcaggtggaaagagaaattggcaagagaacccgggaattgagtata
gagaaccagtgttctatggacacgaaaagcaaattgggtacaagtaagcaagcagaaaat
gggcagccagaaccacaaaacaaagtcccagctgaagaccttacattgacattcagtgat
gtaccgaatggatcagctttgacacaagagaatctcagcctcctatcaaacaagacaagc
tctttgaacctgtcagaagaccctgaaggaggaggagataacagtgattcccagagacca
ggagttacttccagttctgctccctag
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integrated database retrieval system
