Cricetulus griseus (Chinese hamster): 100750806
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Entry
100750806 CDS
T02813
Symbol
Hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03015
mRNA surveillance pathway
cge05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100750806 (Hbs1l)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
100750806 (Hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100750806 (Hbs1l)
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100750806 (Hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
100750806
NCBI-ProteinID:
XP_027257710
UniProt:
A0A8C2N341
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All DBs
Position
2:complement(268469142..268538122)
Genome browser
AA seq
682 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDNPVEEYGYEDRKES
SNSLLNHQLNEIDQARLYSCLDHMREVLGDAVPDDILTEAVLRNKFDVQKALSVVLEQDN
VQNLKGKSERVVSAGKASKGKSVGSRSSQSESEIVPKVAKMTVSGKKQTMGFEVPGLTSE
ENGDSLPNPHKGPPGDDGSMASPNVLETSTHKSALLPPSMQASEELSSTPTPVKKSGKLR
QQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQESKKA
GKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQA
DVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEIT
GKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTSWYKGSCLLEQIDSFKPPQR
SIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDEPVD
WAAAGDHVSLTLVGMDIIKINVGCIFCGPKEPIKACTRFRARILIFNIEVPITKGFPVLL
HYQTVSEPATIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKEL
GRFMLRYGGSTIAAGVVTEIKE
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggctcggcatcggaacgtccgaggctataactacgatgaagattttgaagatgatgat
ttgtatggccagtctgtggaggacgattattgtatttcaccatcaacagctgctcagttt
atttactcacgacgtgacaaccctgtagaagaatatggttatgaagatcggaaagaatct
tctaattctcttctgaatcaccagttaaatgaaattgatcaagctcgtctttattcatgc
cttgatcacatgagagaggtcctgggagatgctgtgcctgatgacatactgactgaagca
gttctcagaaacaagtttgatgtccagaaggctctgtcagtagttctggaacaagataat
gtgcagaatttgaaggggaagagtgaaagagtggtgtctgcaggaaaggcatcaaaagga
aaatcagttggatctcggtcgtctcagagtgagtctgaaattgtgccaaaagttgctaaa
atgactgtatctgggaagaagcaaactatgggatttgaagtgcctggcttaacctctgag
gagaatggggatagtctgcctaatcctcacaaaggacctcctggtgatgatggcagcatg
gcttctcctaatgttcttgagaccagcactcataaatctgccctcctacctccctccatg
caagcatcagaagagctgagttcaactccaacaccagtgaagaagtctggcaagctgagg
cagcagatagacgtgaaggcagagctggagaagcggcagggcgggaagcagctgctcaac
ttagtggtcattggtcatgttgatgctgggaaaagtactctgatgggccatatgctttat
cttctgggtaatgtaaacaaaagaactatgcataagtatgaacaagaatctaaaaaggct
ggcaaggcttcctttgcatatgcatgggtcttggatgagactggagaagaaagggaaagg
ggagtaacaatggatgttggcatgacaaagtttgaaaccacaaccaaagttattacatta
atggatgctccaggccataaggatttcattcctaacatgatcactggagcagcccaggcg
gatgtagctgttttagttgttgatgccagcagaggagagtttgaagctggatttgagact
ggaggacagactcgagagcatggccttttagtacgatctcttggagtgacacagcttgct
gttgctgtcaataaaatggatcaggtaaattggcaacaagaaagatttcaagagattact
ggaaaacttgggcactttcttaagcaagcaggttttaaggagagtgatgtagcttttatc
cctacgagtggtctcagtggtgaaaatttaatcacaagatcacagtcgagtgagctcacc
agctggtataaaggatcgtgtttattagaacaaattgattccttcaagccccctcaacga
tccattgacaaaccttttagattatgtgtgtcggatgtcttcaaagatcaaggatctggc
ttttgtgtgactggtaagattgaagctggttatatccagactggtgaccgactgttagca
atgccacccaatgaaacttgtactgcaaaaggaatcactctgcatgatgaacctgttgat
tgggcagcagcaggagatcacgttagtcttactttggttgggatggatatcatcaaaatc
aatgttggctgcatattttgtggccccaaagaacctatcaaagcttgtactcgattcaga
gcccggatcctcatcttcaatattgaagttcctatcactaaaggatttcctgtgctgtta
cactaccaaaccgtcagtgagcctgctactattaaacgattgattagtgtcctaaacaaa
agtactggtgaagtcacaaagaaaaagcctaagctgctgaccaagggccagaatgcgttg
gtagagcttcagacacagagaccagtggctctggagctctacaaagacttcaaggagctg
gggaggtttatgctgcggtatggtggctccacaatagctgctggtgttgtcactgagatc
aaagagtga
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