Cricetulus griseus (Chinese hamster): 100751003
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Entry
100751003 CDS
T02813
Symbol
Atg16l2
Name
(RefSeq) autophagy-related protein 16-2 isoform X3
KO
K20868
autophagy-related protein 16-2
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100751003 (Atg16l2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cge04131
]
100751003 (Atg16l2)
03029 Mitochondrial biogenesis [BR:
cge03029
]
100751003 (Atg16l2)
Membrane trafficking [BR:
cge04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
100751003 (Atg16l2)
Others
Specific organelles associated proteins
Auto phagosome
100751003 (Atg16l2)
Mitochondrial biogenesis [BR:
cge03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100751003 (Atg16l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_NWD2_C
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_WDR41
Beta-prop_ACSF4
MIF4G_like_2
Phage_scaffold
IFT57
Motif
Other DBs
NCBI-GeneID:
100751003
NCBI-ProteinID:
XP_027263615
UniProt:
A0A9J7JL30
LinkDB
All DBs
Position
3:98214764..98227375
Genome browser
AA seq
623 aa
AA seq
DB search
MAGPGSPGAPCAPAAVWKRHIVRQLRHRDRTQKALFLELVPAYNHLLEKAELLAKFSEKL
KLEPDDVASTQNQDSRGEFSGPVSDQVSSPASLKVKWQEEEQRLQLVCGEMAYQVVKKSA
ALDTLQSQLEERQGRLEALQACVVRLQEARAQQSRQLEERQAENAAQREAYQALLEQAAH
QEAALRRLQEEARDLLERLVQRKARAAAECNLRNERRERANQARVSQELKRAAKRTVSIS
EIPNTLEDGTRDKTVTLAPGDTPEFLESETCEKWKRPFRSASATSLTLSRCVDVVKGLLD
FKKRRGHSVGGAPEHRYQSIPVCVSAQIPTQAQDVLDAHLSEVNAVCFGPNSSLLATGGA
DRLIHLWNVVGGRLEANQTLEGAGGSITSMDFDPSGSQVLAGTYNQAAQLWKVGETQSKE
TLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYCNDVVCGDHII
ISGHNDQKIRFWDSRGPHCIQVIPVQGRVTSLSLSHDQLHLLSCSRDNTLKVIDLRINNI
RQVFRADGFKCSSDWTKAVFSPDRSYALAGSSDGALYIWDVDTGKLESSLQGPHCAAVNA
VAWCFSGNHVVSVDQGRKVVLWH
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacccggttcccctggcgctccctgcgcgcccgccgccgtctggaagcgccac
atcgtgcggcagctgcggcatcgggaccgcacgcagaaggcactcttcctggagctagtg
ccggcttataaccatctcctagagaaggctgaacttctagccaagttctcagagaagttg
aagttagagccagatgatgtcgcctccacccagaatcaggactcccggggggagttctcc
gggcctgtctctgaccaggtctcatcaccagcctctctgaaggtgaagtggcaggaagag
gagcagagactgcaactggtctgtggtgagatggcctaccaggtggtcaagaagagcgca
gctctagacaccctgcagtcacagctggaggagcggcagggcaggctggaagcccttcag
gcctgcgtggtacggctacaggaggcgcgggcgcagcagtccaggcagctggaggaacgg
caggcggaaaacgcggcgcagagagaagcctaccaggcactgctagaacaagctgcgcac
caggaggccgcactgcgtaggctgcaggaggaggcacgggacctgctggagcggcttgtg
cagcgtaaagcgcgtgccgccgcggagtgcaatctgcgtaatgagcgcagagagagggcc
aaccaagctcgggtgtcccaggagctgaagagagctgctaagcggactgtgagcatcagc
gagattccaaacactctagaagatgggaccagggacaagactgtgactctagctcctggc
gatactcctgagttcctggagagtgagacttgtgagaagtggaaaaggcctttcaggtct
gcctcggccacctctctgacactgtcccgctgtgtggatgtggtgaaggggctgctggac
ttcaagaagaggagaggtcactcagttgggggtgcccctgagcatcggtaccaaagcatc
cctgtgtgtgtatctgcccagattcctacccaggctcaggatgtcttggatgcccatctc
tctgaggtcaatgctgtttgttttggccccaacagcagcctcctggccactggaggggct
gaccggctcatccatctctggaatgtcgtgggaggtcgcctggaggccaaccagaccctc
gaaggagctggtggcagcatcaccagcatggattttgacccctcgggctcccaggttttg
gcaggtacttacaaccaggctgcccagctctggaaggtcggggagacacagtccaaggaa
acactgtctggacacaaggacaaagtgacagctgccaaattcaagctaacaaggcaccag
gcagtgactgggagtcgagaccggactgtgaaggaatgggacctaggccgcgcctactgt
tccaggaccatcaatgtactttcctactgtaatgacgtggtgtgtggagaccacatcatc
atcagtggccacaatgaccagaagatccggttctgggacagcaggggcccccactgcatc
caggtcatccctgtacagggccgggttacctccctgagcctcagccatgaccagctgcat
ctgcttagctgctcccgagacaatacactcaaggtcattgacctgcgaatcaacaatatc
cgacaggtgttcagggcggatggcttcaagtgcagctctgactggaccaaagctgtgttc
agccctgacagaagctatgcactggcaggctcctcagatggagccctgtacatctgggat
gtggacactgggaaactggagagcagtctacagggaccccactgcgctgctgtcaatgct
gtggcctggtgcttctctggaaaccatgttgtgagtgtggaccaaggcaggaaggtggtg
ctctggcactag
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