Cricetulus griseus (Chinese hamster): 100751293
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Entry
100751293 CDS
T02813
Symbol
Hif1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X3
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04066
HIF-1 signaling pathway
cge04137
Mitophagy - animal
cge04140
Autophagy - animal
cge04148
Efferocytosis
cge04659
Th17 cell differentiation
cge04919
Thyroid hormone signaling pathway
cge05167
Kaposi sarcoma-associated herpesvirus infection
cge05200
Pathways in cancer
cge05205
Proteoglycans in cancer
cge05208
Chemical carcinogenesis - reactive oxygen species
cge05211
Renal cell carcinoma
cge05230
Central carbon metabolism in cancer
cge05231
Choline metabolism in cancer
cge05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
100751293 (Hif1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100751293 (Hif1a)
04137 Mitophagy - animal
100751293 (Hif1a)
04148 Efferocytosis
100751293 (Hif1a)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100751293 (Hif1a)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100751293 (Hif1a)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100751293 (Hif1a)
05205 Proteoglycans in cancer
100751293 (Hif1a)
05208 Chemical carcinogenesis - reactive oxygen species
100751293 (Hif1a)
05230 Central carbon metabolism in cancer
100751293 (Hif1a)
05231 Choline metabolism in cancer
100751293 (Hif1a)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
100751293 (Hif1a)
09162 Cancer: specific types
05211 Renal cell carcinoma
100751293 (Hif1a)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
100751293 (Hif1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cge03000
]
100751293 (Hif1a)
Transcription factors [BR:
cge03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100751293 (Hif1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
100751293
NCBI-ProteinID:
XP_027274047
UniProt:
A0A9J7JT14
LinkDB
All DBs
Position
5:complement(129454635..129499090)
Genome browser
AA seq
833 aa
AA seq
DB search
MEGAGGDNEKKNRMSSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASV
MRLTISYLRVRKLLDAGDLDTEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKY
MGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRG
RTMNIKSATWKVLHCTGHIHVYDTNSNQPQCGYKKPPMTCLVLICEPIPHPSNIEIPLDS
KTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQ
VTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTEC
VLKPVESSDMKMTQLFTKVESDDTSCLFDKLKKEPDALTLLAPAAGDTIISLDFGSDDTE
TEDQQLEDVPLYNDVMFPSSNEKITNINLAMSPLPAPETPKPLRSSADPALNQEVALKLE
PSPESLELSFTMPQIQDQPASPSDGSTRQSSPEPNSPSEYCFDVDSDMVNVFKLELVEKL
FAEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSPPSVSTVTVF
QQTQLQKPTITAAAAKTATTTTTTATDELKTVTKDNIEDIKILIASPSSTHVPQETTAAT
ASTYSAPPHSRTASPDRAGKRVRDQTEKAHPRSPNVSVTLSQRNTVPEEELNPKIIALQN
AQRKRKMEHDGSLFQAAGIVSGTLLQQPGDRAPTTSLSWKRVKGCKSSEQNGMEQKTIIL
IPSDLACRLLGQSMDESGLPQLTSYDCEVNAPVQGSRNLLQGEELLRALDQVN
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccggcggcgacaacgagaagaaaaataggatgagttctgaacgtcgaaaa
gaaaagtctagagatgcagcgagatctcggagaagcaaagagtcggaagttttttatgag
cttgctcatcagctgcctcttccccacaatgtgagctcacatcttgataaagcttctgtt
atgaggctcaccatcagttacttacgtgtgaggaaacttctggatgctggtgatctggac
actgaagatgaaatgaaagcacagatgaactgcttttacttgaaagccctggatggcttt
gttatggtgctaacagacgatggtgacatgatttacatttctgataacgtgaacaaatac
atggggttaactcagtttgaactaactggacacagtgtgtttgactttactcatccatgt
gaccatgaagaaatgagagaaatgcttacacacagaaatggcccagtgaaaaaaggtaaa
gagcaaaacacacagcgaagcttttttctcagaatgaaatgtaccctaactagccggggg
agaacaatgaacataaagtctgcaacatggaaggtgcttcactgcacaggccatattcat
gtatatgataccaacagtaaccaacctcagtgtgggtacaagaaaccgcccatgacatgc
ttggtgctgatttgtgaacccattcctcatccatcaaatattgaaattcctttagatagc
aagacttttctcagtcgacacagcctggatatgaaattttcttactgtgatgaaagaatt
actgagttgatgggttatgagccagaagaacttttgggacgctcaatttatgaatattat
catgctttggactctgatcatctgaccaaaactcatcatgacatgtttactaaaggacaa
gtcaccacaggacagtacaggatgcttgccaaaagaggtggatatgtctgggttgaaact
caagcaactgtcatatataatacaaagaactctcagccacagtgcattgtgtgtgtgaac
tacgttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaatgt
gtcctcaaaccagttgaatcttcagatatgaaaatgactcagctgttcaccaaagttgaa
tcagacgatacaagctgtctctttgataagcttaagaaagaacctgatgctctaaccctg
ctggccccagctgctggggacacaatcatatctctggattttggcagcgatgacacggaa
actgaagaccaacaactcgaagatgttccactatataatgatgtaatgttcccctcatct
aatgaaaaaatcacaaatataaatctggcaatgtctccgttacctgcccctgaaactcca
aagccacttcgaagtagtgctgatcctgcactgaatcaagaagttgcattaaaattagag
ccaagtccagagtcactggaactttcttttaccatgccccaaattcaagatcagccagca
agtccttctgatggaagcactagacaaagttcacctgagcctaacagtcccagtgaatat
tgttttgatgtggatagcgatatggtcaatgtattcaagttggaactggtcgaaaagctg
tttgctgaagacacagaagcaaagaatccattttcaactcaggatactgacttagatttg
gagatgctggccccctatatcccgatggatgatgatttccagttgcgctcctttgatcag
ttgtcaccattagagagcagttcctcaagccctccaagtgtgagcacagtgacagtgttc
cagcagacccagctacagaaacctaccattactgccgctgctgccaagactgccaccacc
acaaccaccaccgccactgatgaattaaaaacagtgacgaaggacaatatagaagacatt
aaaatactgattgcatctccatcttctacccatgtacctcaagaaacgacagctgctaca
gcatcaacatacagtgctcctcctcacagtcggacagcctcaccagacagagcaggaaag
agagtcagagatcagacagagaaagcccatccaaggagccctaatgtatctgtcactttg
agtcaaagaaatactgttcctgaggaagaattaaatccaaagataatagctttgcagaat
gcccagagaaagcgaaaaatggaacatgatggctccctttttcaagcagcagggattgta
agtggaacattattgcagcagccaggtgaccgtgctcctactacgtcactttcttggaaa
cgtgtgaaaggatgcaaatccagtgaacagaatggaatggagcagaagacaattatttta
attccctctgatttagcatgtagactgctggggcaatcaatggatgagagtggattacca
cagctgaccagttacgattgtgaagttaatgctccggtacaaggcagcagaaacctactg
cagggtgaagaattactcagagctttggatcaagttaactga
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