Cricetulus griseus (Chinese hamster): 100751384
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Entry
100751384 CDS
T02813
Symbol
Trpa1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1 isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
100751384 (Trpa1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cge04040
]
100751384 (Trpa1)
Ion channels [BR:
cge04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100751384 (Trpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
Acetate_kinase
DUF7694
Motif
Other DBs
NCBI-GeneID:
100751384
NCBI-ProteinID:
XP_027254622
UniProt:
A0A8C2L828
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Position
2:145849616..145893304
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AA seq
1116 aa
AA seq
DB search
MKCSLKRMLRPEERKELQGVVYRGVEEDMDYSKDSFKVDIEGDRYRLEHFMKHRRKLSKY
EDENISPLHHAAAEGQVELMKMIIHGSSCEVLNIMDSSGNTPLHWAAEKNQVESVKFLLS
QGANPNLRNNNMMAPLHIAVQASYNEMTKVLVEHTTTNINLEGENGNTALMSTCAKDNSE
ALQILLEKGAKLCKSNKWGDYPVHQAAFSGAKKCMELILKYGEEHGYKREFHINFVNHKK
ASPLHLAVQSGDLDMIKMCLDNGAHIDMIENGKCMALHFAATQGATDIVKLMISSYTGSN
DIVNAVDGNHETLLHRASLFDHHDLADYLISVGADINSTDSEGRSPLILATASASWNIVN
LLLSKGAKVDIKDHLGRNFLHLTVQQPYGLKNLQPEFMQMQHIKELVMDEDNDGCTPLHY
ACRQGVPVSVNNLLGFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGD
LHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASMGGYTQTMKVILDTNLK
CTDRLDEEGNTALHFAAREGHAKAVAMLLSYNADILLNKQHASFLHIALHNKRKEVVLTT
IRSKRWDECLQVFSHYSPSNRCPITEMVEYLPECMKVLLDFCMIPSTEDKSCQDYHIEYN
FKYLQCPLSLTKKVTPTQDVVYEPLTILNVMVQHNRIELLNHPVCKEYLLMKWCAYGFRA
HMMNLGSYCLGLIPMTFLVVKIKPGLAFNSTGIINETTDHLETVDTLNSFPIKVCMILVF
LSSLFGYCKEVVQIFQQKRNYFLDYNNALEWVIYTTSIVFVLPLFLNIPAYMQWQCGAIA
IFFYWMNFLLYLQRFENCGIFIVMLEVIFKTLLRSTGVFIFLLLAFSLSFYVLLNFQDAF
SSPLLSLIQTFTMMLGDINYRDAFLEPLLKKELAYPILTFGQLILFTMFVPIVLMNLLIG
LAVGDIAEVQKHASLKRIAMQVELHTNLEKKLPLWYLRKVDQKSTIVYPNRPRHGRMLRF
FHYFLWTQETRQEVPNTDMCLEMEILKQKYRLKDLTSLLEKQHELIKLIIQKMEIISETE
DEDNHCSFQDKFKKERLEQMQSKWNFVLNAVKTKTH
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcagcttgaagagaatgctacgtcctgaggagagaaaggagctccagggcgtt
gtctatcgtggcgtagaggaagacatggactattccaaggactcctttaaggtggacatt
gaaggagataggtatagattagaacacttcatgaagcaccgaagaaaactaagcaaatat
gaggatgaaaatatttcccctttgcatcatgcagcagcggaaggtcaagtggaactcatg
aagatgatcatccatggttcttcctgtgaagtgctgaatataatggatagcagtggaaat
accccactacactgggctgctgaaaaaaaccaagttgaaagtgtgaagtttcttcttagc
caaggagcaaatccaaacctgcgaaacaacaacatgatggcacctcttcacatagccgtg
caggcctcatataatgaaatgactaaggtcttggttgagcacaccaccactaacatcaac
ttagaaggagagaatggaaacacagctttgatgtctacttgtgccaaagacaatagtgaa
gcattgcagatattgttagaaaaaggagctaagctgtgtaaatcaaataaatggggagat
taccctgttcaccaggctgcattttcaggtgccaaaaaatgcatggaattaatactaaag
tatggtgaagaacacggctacaaacgggagtttcatattaactttgtgaatcataagaaa
gccagcccactccacctcgcagttcaaagtggtgacttggacatgattaaaatgtgccta
gacaatggtgcacacatcgacatgatagagaatggaaagtgcatggccctccattttgct
gcaacccagggagccacggacatcgttaaactcatgatctcctcctatactggaagcaat
gacattgtgaatgcagttgatggcaaccatgagaccctgcttcacagagcctcattgttt
gatcaccatgacctggcagactacttaatttcagtgggagcagacatcaacagcacagat
tcagaaggacgctctccacttattttagctactgcttctgcatcttggaatattgtgaat
ttgctcctctctaaaggtgccaaagttgacataaaagatcatctggggcgcaacttttta
cacttgactgtacaacagccttatggactaaaaaatttgcagccagagtttatgcagatg
caacatattaaggagctggtgatggatgaagacaatgatgggtgtacacctctccattat
gcgtgtaggcagggcgtcccagtctctgtaaataacctccttggcttcaacgtgtccatt
cattccaaaagcaaagataagaaatcacccctgcattttgcagccagctacggtcgcatc
aatacatgtcagaggcttctacaagacataagtgacacaaggcttttgaatgaaggggat
cttcatggaatgacccctctacacctggcagcaaagaatggacatgataaagttgttcag
cttcttctaaagaaaggggcattgtttctcagtgaccacaatggctggacggctttgcac
cacgcatccatgggtgggtacactcagaccatgaaggtcattctcgatactaacttgaag
tgtactgatcgactagatgaagaagggaacacagcgctccactttgcagcacgggaaggc
catgccaaggctgttgcgatgcttctgagctacaacgctgacatcctcctgaataagcag
catgcctcctttctacacattgcactgcacaataagcggaaggaagtggttctcacaacc
atcaggagtaaaagatgggatgagtgtcttcaagttttcagtcattattctccaagcaat
agatgtccaatcacagaaatggtagaatacctccctgagtgcatgaaagttcttttagat
ttctgcatgataccttccacagaggacaagtcctgtcaagactaccatattgagtataac
ttcaaatatcttcagtgcccactatcattgaccaaaaaagtaacacctacccaggatgtg
gtatacgagcctcttacaatactcaatgtcatggtacaacataaccgcatagaacttctc
aaccaccctgtgtgtaaggaatacttactcatgaaatggtgtgcttatggattcagagcc
catatgatgaacctaggatcttattgtcttggtcttatacccatgacctttcttgttgtt
aaaataaagcctggactggccttcaactccactggaataatcaatgaaactactgatcat
ttggaaacagtagacactctgaattcatttccaataaaagtatgtatgattctagttttt
ttatcaagtttatttggatattgcaaagaagtggtccaaattttccaacagaaaaggaat
tatttcctggactacaacaatgcactggaatgggtcatctacacaaccagtatcgtcttt
gtattgcccttgtttctcaacatcccagcatatatgcagtggcaatgtggagcaatagca
atattcttctattggatgaattttctattatatcttcaaaggtttgagaactgtggaatt
ttcattgttatgttggaggtgatttttaaaacattgttgagatcgacgggagtgtttatc
ttcctcctattggcttttagcctcagcttttacgtcctcctgaatttccaagatgccttc
agctctccattgctttccttaatccagactttcactatgatgctaggagacatcaactat
cgagatgctttcctagaaccactcttaaaaaaggaattggcgtatccaatcctgaccttt
gggcaacttattctcttcacaatgtttgtcccgattgttctcatgaatttactaattggt
ttagcagttggggacattgctgaggtccagaagcatgcatcattgaagaggattgctatg
caggtggaacttcataccaacttggagaaaaagcttccactgtggtacctacgcaaagta
gatcagaagtccaccattgtgtatccgaacagacccagacatggcaggatgttacgattt
tttcattactttctttggacacaagaaacacggcaagaagtaccaaacactgacatgtgc
ttggaaatggaaatattgaaacagaaatacagactgaaggacctcacttctctcttggaa
aagcagcatgaactcatcaaactcatcatccagaagatggaaatcatctcagaaacagaa
gatgaagataaccattgttctttccaggacaagttcaaaaaggagcggctagaacaaatg
cagagcaaatggaactttgtgttgaatgcagttaagactaaaacacactaa
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