Cricetulus griseus (Chinese hamster): 100752917
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Entry
100752917 CDS
T02813
Symbol
Edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100752917 (Edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100752917 (Edc4)
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100752917 (Edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
100752917 (Edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
DUF445
Beta-prop_HPS5
WDR55
Motif
Other DBs
NCBI-GeneID:
100752917
NCBI-ProteinID:
XP_027261663
UniProt:
A0A9J7FMR8
LinkDB
All DBs
Position
3:182167090..182180809
Genome browser
AA seq
1420 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGSNAESQRASSTYNGDLNGLLVPDPLSSGDGNS
TSKPGVRTLPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLAFAHLNSPQLACLDEAGNLFVWRLALVKGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHNTWPVDVSQIKQGFIVVKGHSTCL
SEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQDEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGAESSHGASAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHPA
HEDFTFPTAFGESRPELGSEGLASAAHGSQPDLRRIVELPAPSDFLSLSSETKPKLMTPD
AFMTPTASLQQCSFSGSSQMSASPSSSSSSSSSSSSSSSSSSSSSSLTAVSAVSSSSAMD
PSLPSRPPEELTLSPKLQLDGSLTINSSSSLQASPRSLLPGLLSGPADKLTPKGPGQVST
AASALSLDLQEVEPLGLPQASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSVPE
GLIEPDSMASAASALHLLSPRPRQGPELGSQLGLDGGPGDGDRHNTPSLLEAALTQEVAT
PDSQVWPTAPDITRETCSTLAESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDTSAEQSDH
DDEVASLASASGGFGSKIPTPRLPAKDWKTKGSPRTSPKLKRKSKKDDGDSAVGSRLTEH
QVAEPPEDWPALIWQQQRELAELWHNQEELLQRLCAQLEGLQNTVTDHVERALETRHEQE
QRRLERALAEGQQRGGQLQEQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEP
VAGQLSNSMATKLTAVEGSMKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSV
VLPAFEKSCQAMFQQINDSFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTL
QSATEQMAATVSSSVRAEVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQATVTSS
IMQAMRSAAGTPVPSAHLDCQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVD
PAQVFGQPPCPLSQPVLLSLIQQLASDLGTRSDLKLSYLEEAVMHLDHSDPITRDHMGSV
MAQVRQKLFQFLQADPHNSLGKAARRLSLMLHGLATPSLP
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacatcgaggacgccacgcagcatctgcgggacatcctc
aagctggaccggcccgctggaggctccaatgcagagagccaaagggcatccagtacctac
aatggagacctcaatgggctcctggttccagacccactcagctcaggtgatggtaactca
acaagcaaaccgggtgtacggaccttgccacctattaacctgcaggaaaagcaggtcatt
tgcctctctggagatgacagctccacttgcattgggattttggccaaggaagtggaaatt
gtagccagcagtgattctagcatttccagcaaggcacgggggagcaacaaggtgaaaatc
cagcctgtggccaagtatgactgggagcagaaatactactatggcaacctgattgcagtg
tctaactccttcttggcatatgccattagggctgccaacaacggctcagcaatggtacgt
gtgatcagtgtcagcacttcagagcggaccctactcaaaggtttcacaggcagtgtggct
gatctggccttcgcacacctcaactctccacagcttgcctgcctggatgaggccggcaat
ctttttgtgtggcgcttggctctggttaagggtaaaattcaagaagagattttagtccat
atcagacagccagagggcacaccactgaaccacttccgaaggatcatctggtgccccttc
atccctgaggaaagtgaggactgttgtgaggaaagtagcccaacagtggccctgctgcat
gaagaccgggctgaggtatgggacctggatatgcttcgctccagccataatacctggcct
gtggatgtcagccaaatcaagcagggcttcattgtggtaaaaggccatagcacgtgctta
agtgaaggagccctctctcctgatgggactgttctggctactgcaagccatgatggcttt
gtcaagttctggcagatctacattgaaggtcaggatgagccaaggtgtctgcatgaatgg
aagcctcatgatggacgacccctttcttgcctcttattctgtgataaccataaaaaacag
gatcctgaggtcccattctggaggttcctcattactggcgctgaccaaaatcgggagcta
aagatgtggtgtacagtttcctggacctgcctgcaaaccattcgtttctccccagatatc
ttcagctcagtgagcgtacctcccagcctcaaagtttgcttggacctctcggcggagtat
ctgattcttagtgatgtgcaacgaaaggtcctctatgtgatggagctgctacagaaccaa
gacgaaggccgtgcttgctttagttccatctctgagttcctgcttacccaccctgtgctg
agctttggcatccaggttgtgagtcgatgccggctgcggcacactgaggtgctgcctgct
gaggaggagaatgacagtctgggggctgagagttcccatggagctagtgccatggaatct
gcagctggtgtgcttatcaagctcttttgtgtgcatactaaggcactacaggatgtacag
atccgcttccagccacaactgaaccctgatgtggtggctccactgcctacccaccctgct
cacgaggacttcactttcccaacagcgtttggagagtcccgacctgaactaggctctgag
ggattagcttcagctgctcatgggtctcagcctgaccttcgacgcatcgtggaactccct
gcaccttcagacttcctcagtctgagcagtgagaccaagcctaagttgatgacacctgat
gctttcatgacgcctaccgcttccctgcagcagtgctcattctctggatcttcccagatg
tctgcgtcccctagcagtagcagtagcagcagcagcagcagcagcagcagcagtagcagc
agcagcagcagcagctctctaacagctgtgtctgctgtgagtagctcctcagccatggac
ccctccttgcccagtagaccacctgaggagctgaccttgagtcccaagctgcagctggat
ggcagcctgacaataaacagcagcagcagcctgcaggcaagccctcgaagcctccttcct
gggctgctctcaggcccagctgacaaattgactcccaagggacctgggcaggtatctact
gctgcctctgcactatccttggatttgcaagaagtggaacctctggggctaccccaggcc
tctcccagtcgcacccgttcccctgatgtgatctcttcagcttccactgccctgtcccag
gacatccctgaaattgcatctgaggccttgtcccgtggctttggctcctctgttcctgag
ggcctcattgagccagacagtatggcctcagctgcttcagcactacacttactgtctcct
cggcccaggcaaggccctgagcttggctctcagcttggcctagatggaggccctggggat
ggggatcggcataataccccctccctactggaagcagccttgacccaggaggttgcaacc
cctgacagtcaagtctggcctacagcacctgacattactcgtgagacttgtagtaccttg
gcagaaagccccaggaacggccttcaggaaaagcacaaaagcctggccttccaccggcca
ccttatcacctgctgcagcaacatgacagtcaggacactagtgctgagcaaagtgaccac
gatgatgaggttgctagccttgcttctgcctcagggggttttggcagcaaaattcctact
ccacggctgcctgctaaggattggaagaccaagggatctcctcggacttcacccaaactc
aagaggaaaagcaagaaggatgatggggattcagctgtgggatcccgtctcacagagcac
caggtagcagagccccctgaggactggccagcattaatctggcagcagcaaagagagctg
gcagagctatggcacaaccaagaagagctgctacagcgtctctgtgcccaacttgaaggc
ctacagaacactgtcactgaccatgtagaacgtgccctggagactcggcatgaacaggag
cagcggcgactggaacgggcactggctgaggggcagcaacggggcgggcagctgcaggag
caactgacacagcagctgtcccaggcattgtcttcagctgtggctgggcggctagagcgc
agtataagggatgaaatcaagaagacggttcctccatgtgtctccagaagtctggagcct
gtggcgggtcaattaagcaactccatggctaccaaacttacagctgtagaaggcagcatg
aaagagaatatctctaagctactcaaatccaagaacttgacagatgccattgctcgagca
gctgcagacacattacagggaccaatgcaggctgcctaccgggaagccttccagagtgtg
gtattgccagcttttgaaaagagttgccaggctatgttccagcaaatcaatgacagcttt
aggctgggcacacaggaatatttgcagcagctagagagtcacatgaagagcaggaaggca
cgtgaacaggaagctagggagcctgtgctggcccagcttcggggcttggtcagcacactt
cagagtgccactgagcagatggcagccactgtgtctagcagtgttcgggctgaggtgcaa
caccagctgcatgtggctgtgggcagcttgcaggagtcaattttagcacaagtacaacgc
attgttaagggtgaagtaagtgtggctcttaaggagcaacaggccactgtcacttccagc
atcatgcaggccatgcgttcagctgctggcacacctgttccttctgcccaccttgactgc
caggcccaacaagcccatatcttgcagttactgcagcagggccacctcaatcaggccttc
cagcaggcactgacagccgctgatctcaacctggtgctgtatgtgtgtgagaccgtggac
ccagcccaggtttttgggcagccgccctgtccactatcccagcctgtactcctttcccta
atccagcagctggcatctgaccttggaactagaagtgacctcaagctcagctatttggaa
gaggctgtgatgcacctggaccacagtgatcccatcactcgagaccacatgggctctgtc
atggcccaggtgcgccagaagctcttccagttcctgcaagctgatccgcacaactctctt
ggcaaagctgcccgtcgtctcagcctaatgttacatggccttgcgacccctagcctccct
tag
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