Cricetulus griseus (Chinese hamster): 100752978
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Entry
100752978 CDS
T02813
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of nonsense transcripts 3B-like isoform X2
KO
K14328
regulator of nonsense transcripts 3
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03013
Nucleocytoplasmic transport
cge03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100752978
03015 mRNA surveillance pathway
100752978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100752978
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100752978
mRNA cycle factors
P-body specific factors
100752978
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
100752978
NCBI-ProteinID:
XP_035305338
UniProt:
A0A9J7KBI2
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All DBs
Position
9:26119940..26122221
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AA seq
470 aa
AA seq
DB search
MKEEKDHRPKEKRVTLLTPQGATGGSVGATAEGARGEDRHDHNRDRKDALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFANDTSLYPHMFARAYINFKNQEDILLFRDRFDGYVFL
DNKGQEYHAIVEFAPFQKAAKKRIKKRDTKVGTIDDDPEYRKFLETYATDNEKMTSTPET
LLEEIEAKNRELIAKRTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIERVPEREKIKDEPKIKLLKKPEKGDEKELDKRDKAKRPDKENLTEER
ASGQSCTLPRRSDVELKDEKPKRLDDESIRDYRDRDRDYERDQECMMREREALKRQEEER
RRQQQKERYEKEKAFKRKEEEMRREKEAFRDKGKKSENPESICASDKIEKKDEVIKRDCI
RNKDRPAMQLYQPGARSRSRLCPPDDKPGDSPVDKKQESGISHRKEGGEE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagagaaagatcacaggcctaaggagaagcgagtgaccctgttaacgcctcag
ggtgccacaggcggcagcgtgggagctactgccgaaggcgccagaggggaagataggcac
gatcacaacagagacaggaaagacgctttgagcaaggtggtaattcgaagattgcctccc
actttgaccaaggagcagcttcaggaacatcttcaacctatgcctgagcatgattatttt
gagttttttgctaatgatactagtctgtatcctcatatgtttgccagagcatatatcaac
tttaaaaaccaagaagacatccttttattcagggaccgatttgatggctatgtattcctt
gacaataaaggtcaggaatatcatgctatagtagaattcgcaccgtttcaaaaagctgcg
aaaaagaggattaagaaaagagatacaaaagttgggactatcgatgatgatccagaatac
agaaaatttttggagacttatgccacagataatgaaaaaatgacatctactccagagaca
ctgctggaagaaatagaagccaaaaatcgagaattaatagctaaaaggacaaccccactt
ttgagcttcctgaagaacaagcagagaatgagagaagaaaagagggaagaaaggaggaga
cgcgaaatagaaaggaaaagacaaagagaagaagagagaagaaaatggaaagaagaggag
aaacgaaaaagaaaagatatagaaaagctaaagaagatagaaagagttccagaaagagaa
aaaataaaggatgaaccaaagattaagctgctcaagaaaccagaaaaaggagatgaaaaa
gaacttgataaaagagacaaagcaaagagaccagacaaagagaatctgactgaagaaaga
gccagtgggcaaagttgtactctgcccaggcgttctgatgttgaactgaaggatgaaaag
ccaaagaggcttgatgatgagagtatcagagattacagagacagggatcgggattatgaa
agagatcaggagtgcatgatgcgagaacgagaggctctgaagcggcaggaagaagaacgc
cgcaggcagcagcagaaggagcgctatgagaaagagaaggctttcaaacgaaaggaagag
gaaatgaggagagagaaagaagcatttcgagataaaggaaagaagagtgagaatccagaa
tcaatatgtgcctcagacaaaattgaaaagaaagatgaagtgattaagagagactgcata
aggaacaaggatcgtccagcaatgcagctttaccaaccaggagctcgaagccgaagtcga
ctctgtccccctgatgacaagcctggagactcaccagtggacaaaaagcaggaaagtggt
attagccatagaaaagaaggaggagaggagtga
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