Cricetulus griseus (Chinese hamster): 100753096
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Entry
100753096 CDS
T02813
Symbol
Rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03030
DNA replication
cge03410
Base excision repair
cge03420
Nucleotide excision repair
cge03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100753096 (Rfc1)
03410 Base excision repair
100753096 (Rfc1)
03420 Nucleotide excision repair
100753096 (Rfc1)
03430 Mismatch repair
100753096 (Rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cge03032
]
100753096 (Rfc1)
03400 DNA repair and recombination proteins [BR:
cge03400
]
100753096 (Rfc1)
DNA replication proteins [BR:
cge03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100753096 (Rfc1)
DNA repair and recombination proteins [BR:
cge03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100753096 (Rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
BRCT_2
AAA_5
AAA_14
RuvB_N
Rad17
AAA_33
AAA_16
AAA_22
AAA_7
Zeta_toxin
nSTAND3
AAA_17
AAA_18
AAA_30
NTPase_1
RNA_helicase
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
100753096
NCBI-ProteinID:
XP_027246545
UniProt:
A0A9J7F3Q5
LinkDB
All DBs
Position
1
Genome browser
AA seq
1157 aa
AA seq
DB search
MNWSRFKPSLLGSKDIRKFFGVISSGKKPVSETVKKNEKIKPSEGTVKGKKAVKEVKVNN
SCKEDASKPKQHNKKKRIIYDSDSESEETVQIKNAKKKSEKLSLSSKPSKISQKDPVTYV
SETDEDDDFVCKKAASKSKENGVSTNSYLGASNMKKNEENTKTKNKPLSPIKLTPTSVLD
YFGTESVQRSGKKMVASKRKENSQKTDDSRLNDEAIAKQLQLDEDAELERQLHEDEEFAR
TLAMLDEEPKTKKTRKDPEEGESFSPVQADLSKAESHKSPNKAEHFLNERKTHSPAKCSK
GGNSKGSEHPSRSLAHQKEACSSPKASSKLALMKAKEESSYKDTEQMASKRKENTIELKG
EKQTPKKTKSSPVKKESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEG
LTFVITGVLESIEREEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKATALGTKI
LDEDGLLDLIRTMPGKKSKYEIAAEAEMKKEKSKLEQTPKKHEQGKRKISPTKKESESKK
SKLTPQRDSPAKAIKKEADMSRRGLDFTEQVVKEKPGNNRAQGPAKNSSGNKVESLLWVD
KYKPTSLKNIIGQQGDQSCANKLLRWLRNWHKSSPEEKKHAARFGKHSSKDDGSSFKAAL
LSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKTIVAESLDNTSIKGFYTRRAT
PSKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLR
FQRPRVEQIKSAMLSIAFKEGLKIPPPAMNEIILGANQDVRQVLHNMSMWCAQSKALTYD
QAKADSQRAKKDIRLGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIGPLFVQENYLH
VKPMAAGGDMKKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPTQAIYASVLPGELMRG
YMTQFPTFPSWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSHIRDALVLPLA
SQGVEGIQHVVTLMDTYYLMREDFENIMEVSSWGGKPSPFSRLDPKVKAAFTRAYNKEVH
LTPYSLQAVKTLRLSTGPALDSEYHEESQEDDSQPDEKEQDAIETDAMIKKKTRSSKPSK
PEKDKESKKGKRTSWKK
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgaactggagcagattcaaaccaagccttcttgggtctaaggacattcggaaattcttt
ggggttatatcaagtggaaaaaagcctgtaagtgagacagtaaagaagaatgagaaaata
aagccttcagagggaactgtcaaaggaaagaaagcagtaaaggaagtcaaggttaataat
tcctgtaaagaggatgcttccaaaccaaagcaacacaacaagaaaaagagaatcatctat
gattcagattcagaatcagaggagacagtacagataaaaaatgctaaaaagaaatcagaa
aaattgtcactgtcttctaaacctagtaaaatttctcagaaggatcctgttacttacgtt
tctgagacagatgaagacgatgactttgtatgtaaaaaggcagcctccaaatcaaaagag
aatggagtatctacaaacagttaccttggtgcatcaaacatgaaaaagaatgaagaaaat
actaagactaagaataaacctttatcaccaataaaacttacaccaacatcagtgcttgat
tattttggaactgaaagtgtccagagatctggtaagaagatggtggcaagcaaaagaaaa
gagaattctcaaaaaacagatgattccagattaaatgatgaggccatcgccaagcagttg
cagcttgatgaagatgcagagctggagagacagttgcatgaagatgaagagtttgctcga
acattagccatgttggatgaagaacccaagaccaaaaagacccgaaaggacccagaagag
ggagaatcattttcacctgtccaagctgatctaagcaaagcagagagccataaaagccct
aataaagcagaacatttcttaaatgaaagaaagacccacagccctgctaagtgcagcaaa
ggcgggaactctaaaggatctgagcatccctccagatcgttagctcatcagaaggaagcc
tgttcttctcccaaggccagctccaagctggcacttatgaaagcaaaagaagaaagttct
tacaaagacacagagcagatggcctcaaaaagaaaagaaaacaccattgaactcaaagga
gagaaacagactcctaaaaaaaccaaaagttctccagttaaaaaagagtctgtaagtcca
gaagattctgaaaagaagcgtactaattatcaagcttatcgaagctacttaaatcgtgaa
ggtcccaaagctctgggctccaaagaaatacccaagggagctgaaaattgcttggaagga
ctgacatttgtgatcacaggcgtgctggagtccattgaacgggaagaagccaagtctcta
attgaacgttatgggggcaaagtaacaggaaatgtgagcaagaaaaccaactatctcgtt
atgggccgggatagcggacagtccaagagtgacaaggcaacagctttgggaacaaaaatc
cttgatgaagatggtctgttggatctgattcgaactatgccaggcaagaaatccaagtat
gaaatagctgctgaagctgagatgaagaaagaaaagtccaaattggagcaaacacccaaa
aagcatgaacaaggaaaaagaaaaattagtccaaccaagaaggagtcagagtctaaaaag
agcaaactgactcctcaaagggacagccctgcaaaagccataaagaaggaagcagacatg
tctcggaggggcctggacttcacagagcaggtcgtcaaggagaagcctggcaacaacagg
gctcagggtccagctaagaacagcagtgggaacaaagtggaaagcctgctctgggtggat
aagtacaagcccacatcactcaagaacataatcggacagcaaggtgaccagagctgtgcc
aacaaactgctacgctggctcagaaactggcataagagttctcccgaagagaaaaaacat
gcagcgagatttggcaaacattccagcaaagacgatggttccagtttcaaggcagcactg
ctgtctggccctccaggtgttggcaaaacaactacagcttctcttgtgtgtcaggaattg
ggctacagttatgtggaactaaatgcaagtgatactcggagtaagaacagtttgaaaaca
attgttgctgaatcattggacaacacaagcatcaaaggcttttatacaagaagagcaact
ccttcgaagcatgctctcatcatggatgaggttgatggtatggcaggcaatgaagacagg
gggggaattcaggaactaataggcctgataaagcatactaaaattcccatcatttgtatg
tgcaatgatagaaatcaccccaaaattcgttctttggttcattattgttttgatcttcgt
ttccaaagacctcgggttgaacagattaagagtgcaatgttgtctattgcatttaaagag
ggcttaaagatcccccctccagccatgaatgagataattttgggagctaatcaagatgtc
agacaggttttacataatatgagtatgtggtgtgcacaaagtaaggcactcacttatgac
caagccaaggctgattctcagagggccaagaaggatatcagactgggcccatttgatgtt
gcccggaaagtgtttgcagctggagaggagactgcacacatgtcactgatggacaaatcg
gatctctttttccatgactattcgataggccccctctttgtccaggagaactacctccat
gtaaagcccatggctgcagggggcgacatgaaaaagcacttgatgcttttaagccgggcg
gcagacagcatatgtgatggtgacttagtggacagtcagatccggagcaagcaaaactgg
agtcttttgcccacacaggccatttatgccagtgttcttcctggagagttgatgaggggc
tatatgactcagtttcctaccttcccaagctggctggggaagcactcatctacaggcaaa
catgatcggattgttcaggacttagccttgcacatgagtcttagaacttactccagcaaa
aggacggtgaacatggattacctgtcacacatcagagatgcacttgtgctacccttggcc
tcacaaggggtagaaggaattcagcatgttgtcacacttatggacacgtactatttgatg
agagaagactttgagaatatcatggaagttagcagctggggtggcaagcccagtcccttt
tcaaggctggatcccaaggtgaaagcagccttcacaagagcttataataaggaggtccac
ctgaccccatactcacttcaggcagtaaagacactgagactcagcacaggcccagcactg
gattctgaataccatgaagagtcacaggaagacgacagtcagcctgatgagaaagaacag
gatgcaatagagactgacgccatgatcaagaaaaagacaagatcttcaaagccttcaaaa
ccagaaaaagataaggagtccaaaaagggaaaacgaacaagttggaagaaatga
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