Cricetulus griseus (Chinese hamster): 100753160
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Entry
100753160 CDS
T02813
Symbol
Myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X2
KO
K10357
myosin V
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100753160 (Myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100753160 (Myo5c)
04131 Membrane trafficking [BR:
cge04131
]
100753160 (Myo5c)
03029 Mitochondrial biogenesis [BR:
cge03029
]
100753160 (Myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cge04812
]
100753160 (Myo5c)
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
100753160 (Myo5c)
mRNA cycle factors
P-body specific factors
100753160 (Myo5c)
Membrane trafficking [BR:
cge04131
]
Others
Actin-binding proteins
Myosins
100753160 (Myo5c)
Mitochondrial biogenesis [BR:
cge03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
100753160 (Myo5c)
Cytoskeleton proteins [BR:
cge04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
100753160 (Myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
100753160
NCBI-ProteinID:
XP_027266947
UniProt:
A0A9J7JNC0
LinkDB
All DBs
Position
4:186491207..186565466
Genome browser
AA seq
1732 aa
AA seq
DB search
MAVAELYAKYNRVWIPDPEEVWKSAEIAKDYRVGDQVLRLLLEDGMELDYPVDPGSLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCACAQQSEFKHLQLGSAEEFNYTRMGGNTVIEGVNDR
ADMVETQKTFTLLGFKEDFQMDVFKILAAILHLGNVQVTTVGNERSSVSEDDGHLKVFCE
LLGLETSKVAQWLCNRKIVTTSETVVKPMTRPQAINARDALAKKIYAHLFDFIVERINQA
LHFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPR
MSNTSFIIQHFADKVEYQCEGFLEKNRDTVYDMLVEILRASKFHLCATFFQENPAPSSPF
GSTITVKSAKQVIKPNSKHFRTTVGSKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYLEFYSRYGILMTQQELSLSDKKEVCKVA
LHRLIQDSNQYQFGRTKIFFRAGQVAYLEKLRLDKLRQDCIMIQKHVRGWLQRKKFLRER
QAALTIQQYFRGQQTVRKAITATALKEAWAAIILQKHCRGYLVRNLYQLIRVATITIQAY
TRGFLARKQYRKLLQEHKAVILQKYARAWLARRRFQSIRRFVLNIQLTYRVQRLQKKLED
QGKENHGLVEKLTSLATLRAGDLEKLQKLEAELERAASHRHSYEEKGRRYRDTVEERLSK
LQKHNAELVLQKEQAELMLQEKTEELKEKMDKLTRQLFDDVQKEEQQRLLLEKSFELKTQ
AYEKQIESLREEIKSLKDERTQLHHQLEEGRVTSDSLKGEVARLSKQAKTISEFEKEIEL
LQAQKIDVEKHVQSQKREMRERMSEVTKQLLESYDIEDVRSRLSVEDLEHLNEDGELWFA
YEGLKKATRVLETHFQSQKDCYEKEIEGLNFKVVHLSQEINHLQKLFREETGINESIRHE
VTRLTSENMMIPDFKQQIAELERQKQDLESRLKEQTDKTEGKLEELSSHLIQAQEEEGMQ
AKAVEAKGKDEIQELQEASEFLKKQPEAEGEVKHILQQEASQLALENRDLEEELDMKDRV
IKKLQDQVKTLTKTIEKANDVRLPSGPKEYLGMLEYKKEDEAKIIQNLILDLKPRGVVVN
MIPGLPAHILFMCVRYADSLNDANMLKSLMNSAINGIKHVVKEHFEDLEMLSFWLSNTCH
FLNCLKQYSGEEEFMKYNSPQQNKNCLNNFDLTEYRQILSDVAIRIYHQFVVVMENSIQP
IIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSVLQQLSYFYSTMCQNGLDPE
LVRQAVKQLFYLIGAVTLNSLLLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQNSSAKET
LEPLSQAAWLLQVKKTTDSDAKEISECCTSLSAVQIIKILNSYTPIDDFEKRVAPSFVRK
VQALLNNRGDSSQLMLDTKYLFQVTFPFTASPHALEMTQIPSSFKLSFLRRL
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctctacgcgaagtacaacagggtttggatccctgatcctgaagaa
gtttggaagtcagctgaaattgcaaaggactacagagttggtgaccaagtcctccgactt
ctgctagaggatggaatggagctggactaccctgttgacccagggtcacttcctccactt
agaaacccagacatccttgtgggtgagaatgacctcacagccctcagctacctccacgag
ccggcagtgctgcataacctcagaatccgctttgcagagtccaagctcatctacacctac
agcggaatcatcttggtggccatgaatccttacaaacagctgccaatctatggggatgcc
atcatccatgcctacagcggacagaacatgggcgacatggacccacacatctttgcagtc
gcagaggaggcctacaagcagatggccaggaacaatagaaatcagtccataatcgtgagt
ggggagtcgggagctggcaagactgtttctgcacgctatgccatgaggtactttgccact
gtcagcaaatccagcagcaacgcccacgtggaggacaaagtcctggcatccaatcccatc
actgaggctgttggaaatgccaagactacccgcaatgataacagcagtcggtttgggaaa
tacacagaaatcagctttgatgagagaaatcagatcattggtgccaatatgagaacctat
ctcctggagaaatccagagttgtctttcagtcagaaaatgaacggaattaccacatcttc
tatcagctttgtgcatgtgcacaacagtcagaatttaaacatcttcaactagggagtgct
gaagagttcaactacaccagaatgggaggtaacactgtcatcgagggtgtaaatgacaga
gctgacatggtggagacgcagaagacattcacactactgggtttcaaggaagattttcag
atggatgttttcaagatcctcgctgccatcctacatctgggtaatgtgcaggtcaccacc
gtgggcaacgagaggtcttcagtcagtgaggatgacggtcacctgaaggtgttctgtgag
ctcttgggcctggagactagcaaagtggctcagtggctatgcaatagaaaaatcgtgact
acctcggagactgtggtaaagcccatgaccaggcctcaggccatcaatgccagggatgca
ctggccaaaaagatctacgctcacctgttcgacttcattgtagagagaattaaccaggca
ctgcacttctcaggcaagcagcacacttttattggcgttttggacatttatggttttgag
acctttgatgtcaacagctttgaacagttctgcatcaattacgctaatgagaagctgcag
cagcagtttaacctgcacgtctttaaacttgaacaagaagaatacatgaaggaagacatc
ccttggactctgatagacttctacgacaaccaacccgttattgacttgattgaagcaaaa
atgggcattttggagttattggatgaagaatgtttgttgcctcatggaacagatgaaaac
tggcttcaaaagctgtacaacaattttgtcaacaagaactctttatttgaaaagcccaga
atgtcaaacacatccttcatcatccagcactttgctgacaaggtggagtaccagtgtgaa
ggcttcctggagaagaacagagacactgtctatgacatgctggttgaaatcctccgagca
agcaagtttcatctctgcgccacctttttccaagaaaaccctgctccgtcttctcccttt
ggttcaacgatcacagttaaatctgcaaagcaggtcatcaagccaaacagcaagcacttc
cggaccacagtcgggagcaagttccgaagctctctgtacttgctcatggaaacccttaat
gccaccacaccccactacgttcggtgcatcaagccaaacgatgagaagctgccctttgag
tttgactccaaacgaatcgtccagcagctgcgagcctgtggtgttttagaaacaattcga
atcagtgcccagagctacccctccaggtggacatacctcgagttctacagtcgctatggc
atccttatgacccagcaggagctgtccctcagtgataagaaagaggtgtgcaaggtggct
ttgcacaggctcatccaggattctaaccaataccagtttggtagaaccaaaattttcttc
agagcaggacaagtggcttatttagagaaactccgcttagataaactgaggcaggattgt
attatgattcaaaagcatgtgcggggctggctgcagaggaagaagttcctccgagagaga
caagctgccctgacaatccagcagtacttccggggtcagcaaacagtgaggaaggccatc
actgccactgctttgaaggaggcctgggcagccatcatcctccagaagcattgccgaggg
tacctggtccgcaacctgtaccagctgatccgagtggccaccatcaccatccaggcctac
acaaggggtttcctggccaggaagcagtaccgcaagttgctgcaggagcacaaggctgtg
atccttcagaagtatgcaagggcatggctggcccggcgcagattccagagcatccgcagg
tttgtgctcaatatccagctgacttacagggtccagcgtttgcagaagaagctggaggac
cagggcaaagagaaccatggactggtggagaagctgaccagcctggccactctgcgggct
ggcgacctggaaaagcttcagaagctggaagcggagctggagagagcagccagccaccga
cacagctatgaagagaagggcaggagatacagggacacggtggaggagagattgtcaaag
ctgcagaagcacaatgcagagctggtgttgcagaaagagcaagcagagctgatgctgcaa
gagaagaccgaggagctgaaagaaaaaatggacaagctcacaaggcagctcttcgatgac
gtgcaaaaagaggaacagcaaagactacttcttgaaaaaagttttgaactgaaaacgcaa
gcctatgagaaacagatagagtctctgagagaagaaattaaaagcctcaaggacgagagg
acgcagctccatcatcagctggaggagggacgggtcacgtctgacagcctgaagggggag
gtggctcgcctgagcaagcaggcaaagaccatctctgagtttgagaaggagatagagctg
ctgcaggcccagaagatagatgtggaaaagcacgtacagtcacagaaacgggagatgaga
gaacggatgtcagaggtcaccaaacagcttctagagagctatgacattgaagacgttaga
agcaggctctctgtggaagatctggaacacttaaatgaagatggagaactttggtttgcc
tatgaaggactaaagaaagcaactcgtgttctggagacccatttccagtctcagaaggat
tgctacgaaaaagagattgaaggtctgaacttcaaagtagtgcacctgagccaagaaatc
aaccacctgcagaagctgttcagagaagagacaggcatcaatgaaagcatccgtcacgaa
gtcaccagactgacatcagaaaacatgatgatcccagacttcaagcagcagattgcagag
ctggagaggcagaagcaggatcttgagtcccgcctgaaagagcagacagacaagacggaa
ggaaagctggaagagctgtccagtcacctgattcaagcccaagaagaggaaggaatgcag
gccaaggcggtggaagccaaagggaaagatgagatacaagaactgcaggaggccagcgag
ttcctgaagaagcaaccagaagctgaaggggaagtcaagcatattctccagcaagaggcc
tctcagctggctttggaaaacagggatcttgaggaagagttggacatgaaggacagagtg
attaaaaagctacaggatcaagtcaagactttgaccaagacaattgaaaaagccaatgat
gtgcgcctgccctcaggacccaaggagtacctcggaatgctggaatacaagaaagaagac
gaggccaagatcattcagaacctcattcttgacctgaagccccgtggtgtggtggtaaac
atgatccctgggctgccagctcacatcctattcatgtgtgtgcggtatgcagactccctg
aacgatgccaacatgctcaagtccctcatgaacagtgccattaatggcatcaagcacgtg
gttaaggaacatttcgaagatttggagatgctgtccttctggctgtccaacacttgtcat
ttcctcaactgcctgaagcagtacagcggggaagaggaattcatgaagtataacagccca
cagcagaataagaactgcttgaacaattttgatcttacagaatacagacagattctgagt
gatgtggctattcgaatttatcaccagttcgtcgttgtgatggaaaacagcatccagcca
ataatagtgccaggcatgctggagtatgagagtctgcagggcatttccggcctgaagccc
acgggtttccggaagcgctcatccagcatcgatgacacagatgcctacaccatgacgtct
gtgctgcagcagctgagttatttctacagcaccatgtgtcagaatggcctggaccccgag
ctcgtgaggcaggctgtgaagcagctgttctacctgatcggggccgtgaccctcaacagc
ctcctcctgcggaaggacatgtgctcctgcaggaaggggatgcaaatcaggtgcaacatc
agctacttagaagaatggcttaaagataagaatttgcagaacagctcagccaaggagact
ctggagcccctctcccaggcggcctggttgctccaggtcaagaagaccacagacagcgat
gccaaggagatctccgaatgctgcacctccctgtctgcagtgcagatcataaagatcctt
aattcatacacacctatagacgacttcgagaaaagagtcgctccatccttcgttcgcaaa
gtccaggctcttctgaataaccggggtgactcatcccagctgatgctggacaccaaatac
cttttccaagtcacatttcctttcaccgcctcaccgcacgccctggagatgacccagatc
cccagcagcttcaagctcagctttctccggagactgtag
DBGET
integrated database retrieval system
