Cricetulus griseus (Chinese hamster): 100753378
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Entry
100753378 CDS
T02813
Symbol
Tmc1
Name
(RefSeq) transmembrane channel-like protein 1 isoform X2
KO
K21988
transmembrane channel-like protein
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cge02000
]
100753378 (Tmc1)
03037 Cilium and associated proteins [BR:
cge03037
]
100753378 (Tmc1)
Transporters [BR:
cge02000
]
Other transporters
Pores ion channels [TC:
1
]
100753378 (Tmc1)
Cilium and associated proteins [BR:
cge03037
]
Other cilia and associated proteins
Stereociliary proteins
100753378 (Tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
100753378
NCBI-ProteinID:
XP_035297463
UniProt:
A0A9J7GWM6
LinkDB
All DBs
Position
3:40180229..40380621
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AA seq
830 aa
AA seq
DB search
MPAFCISNVGYFMKEMEQGLTQALSNSRNDNLVHLGPTNSRSPAGWGIPFLPYRSMCIPP
PEAVCSIEDNDFPRIEEDQSSVKVQIQVEEKEDDTEESSSEEEDKLPRRESLRPKRKRTR
DVINEDDPEPEPEDEETRKAREKERRRRLRRGAEEEEEIDEEELERLKAQLDENRQMIAT
VKCKPWKMEKKIEVLKEAKKFVSENEGALGKGKGKKWFAFKMMMAKKWAKFLRDFENFKA
ACVPWENKIKAIESQFGSSVASYFLFLRWMYGVNMVLFILTFSLIMLPEYLWGLPYGSLP
RKTVPRAEEASAANFGVLYDFNGLAQYSVLFYGYYDNKRTIGWLNFRLPLSYFLVGIMCI
GYSFLVVLKAMTKNIGDDGGGDDNTFNFSWKVFCSWDYLIGNPETADNKFNSITMNFKEA
IIEERAAQVEENIHLIRFLRFLANFFVFLTLGASGYLIFWAVKRSQEFAQQDPDTLGWWE
KNEMNMVMSLLGMFCPTLFDLFAELEDYHPLIALKWLLGRIFALLLGNLYVFILALMDEI
NNKIEEEKHVKANITLWEANMIKAYNESLSGNTTGPPFFVHPADVPRGPCWETMVGQEFV
RLTVSDVLTTYVTILIGDFLRACFVRFCNYCWCWDLEYGYPSYTEFDISGNVLALIFNQG
MIWMGSFFAPSLPGINILRLHTSMYFQCWAVMCCNVPEARVFKASRSNNFYLGMLLLILF
LSTMPVLYMIVSLPPSFDCGPFSGKNRMFEVIGETLEHDFPSWMAKILRQLSNPGLVIAV
VLVMALTIYYLNATAKGQKAANLDLKKKMKMQALENKLRNKKMAAARAGW
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccttctgtatttctaatgttggctatttcatgaaggaaatggaacaaggactg
acacaagctttgtccaacagccgcaatgataatctagtccacctcggacccacgaattcc
cggagccccgcaggctggggcatccccttcctcccttaccgctccatgtgcatcccccct
cccgaagctgtgtgctcaatcgaagacaatgactttccccgaatagaggaggaccagtct
tcggtcaaggtgcaaatccaagtggaggagaaagaagacgacacagaggaaagctcaagt
gaagaagaagataagctacctagaagagaaagcttgagaccaaagaggaaacggaccaga
gatgtcatcaatgaggatgatccagaacctgagccagaggatgaagaaaccaggaaggca
agagaaaaagaaaggcggaggagactgaggagaggagcggaagaagaagaagaaattgat
gaagaggaattagaacggctgaaggcacagttagatgagaatagacaaatgattgctact
gtcaagtgcaaaccttggaaaatggagaagaaaattgaagttctcaaggaagcaaagaaa
tttgtgagtgaaaatgaaggggctcttgggaaaggaaaaggaaagaagtggtttgccttt
aagatgatgatggccaagaaatgggcaaaattccttcgcgactttgagaacttcaaagct
gcttgtgtcccgtgggaaaacaaaatcaaggcaattgaaagtcagtttggctcatcggtg
gcctcatacttcttgttcctgaggtggatgtatggtgttaacatggttctcttcatcctg
acattcagcctcatcatgttaccagagtacctctggggattaccatatggcagcttacct
aggaaaacggtcccgagagctgaagaggcatctgcagcaaactttggcgtattgtacgac
ttcaacggcctggcacagtactctgtcctcttttatggctactacgacaataaacgcacc
attggatggctaaatttccggctacctctctcctacttcctggtggggattatgtgcatt
ggatacagctttctggttgtcctcaaagcgatgaccaaaaatattggtgacgatgggggt
ggcgatgacaatactttcaacttcagctggaaggtattctgcagttgggactatctgatt
ggtaaccctgaaacagctgacaacaaatttaattctatcacaatgaactttaaggaagcc
atcatagaagaaagagcagctcaggtggaggagaacatccacctcatcagattcctgagg
tttcttgctaacttcttcgtgttcctaacacttggtgcaagtggatacctcatcttttgg
gctgtgaagcgatcccaggaatttgcacagcaagatcctgacacccttgggtggtgggaa
aaaaatgaaatgaacatggttatgtccctcctggggatgttctgtcccacactgtttgac
ttatttgctgaattggaagattaccatcctctcattgctctgaagtggctcctggggcgc
atttttgctcttcttctaggcaacttgtatgtatttattcttgccttgatggatgagatt
aacaacaagattgaagaggagaagcatgtgaaggccaatattaccctgtgggaagccaac
atgattaaggcttacaatgaatcactctctgggaacaccacaggaccacccttttttgtt
catcctgcagatgtaccccgaggaccctgctgggaaacaatggtgggacaggagtttgtg
cggctcaccgtttctgatgttctgaccacttatgtcacgatcctcattggtgacttcctc
agagcgtgctttgtgaggttttgcaattactgctggtgctgggatttggaatatggatat
ccttcatatacagaatttgacatcagtggcaatgtcctcgctctgatcttcaaccaaggc
atgatctggatgggctccttctttgcccctagccttccaggcatcaacatcctccggctc
cacacatccatgtatttccagtgctgggctgtgatgtgctgcaatgttcctgaggccaga
gtctttaaagcttccagatccaacaacttctaccttggcatgctgctgctcatcctcttc
ttgtccaccatgcctgtcctgtacatgatcgtctccctcccgccatcttttgattgtggg
cccttcagtggtaaaaacaggatgtttgaagtcattggtgagaccctggaacacgatttc
ccaagctggatggccaagatcctgaggcagctttccaaccccggcctggtcattgctgtc
gttctggtgatggcattgaccatctattatctcaatgctactgccaagggccagaaagca
gcaaatctggatctaaaaaagaagatgaaaatgcaagctttggagaacaaactgcgaaac
aagaaaatggcagctgctcgagcaggttggtga
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