Cricetulus griseus (Chinese hamster): 100753511
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Entry
100753511 CDS
T02813
Symbol
Prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100753511 (Prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cge03041
]
100753511 (Prpf4)
Spliceosome [BR:
cge03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100753511 (Prpf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
100753511
NCBI-ProteinID:
XP_027256128
UniProt:
G3HI03
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Position
2:complement(83446429..83463513)
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AA seq
521 aa
AA seq
DB search
MASSRASSTATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP
NSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA
DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ
EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH
IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPG
WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcacgagcctcttccacggcaactaaaactaaagcacctgatgatttagtt
gctcctgttgtgaagaaaccacacatctattatggaagcttggaagagaaagagagggaa
cgtctggccaaaggagagtctgggattttgggaaaagaaggactcaaagcaggcattgaa
gctggaaatattaatataacctccggggaagtatttgaaattgaggagcacatcagtgag
cggcaggcagaagtcttggcagagtttgaaagaagaaagagagcccggcaaatcaatgtt
tccacggatgactcagaggtcaaggcttgccttcgagccttgggagaacctatcacactt
tttggagaaggccctgctgaacgaagagaaaggttaagaaatattctctcagtggttgga
actgatgccttaaaaaagacaaaaaaagatgatgagaaatctaagaagtcaaaagaagag
tatcagcaaacctggtaccatgaagggccaaatagcctaaaggtggccagactgtggatt
gctaattattcactccccagggcaatgaaacgcttggaggaggcccgtctccataaggag
attcctgagacaaccagaacctcccagatgcaagagctgcataaatctctccggtctttg
aataatttctgcagtcagattggagatgatcggccaatctcctattgtcactttagtccc
aattctaaaatgctagccacagcttgttggagtgggctttgcaagctctggtctgtccct
gactgcagcctccttcacactcttcgaggccataacacaaatgtaggagcaattgtgttc
catcctaaatctactgtctcattggaccaaaaggatgtcaacttggcttcttgtgctgct
gatggttctgtgaagctttggagtctggacagtgatgaaccagtggcagatattgaaggc
catacggttcgtgtggctcgggtaatgtggcatccatcagggcgtttcctgggcacgacc
tgttacgaccgttcatggcgcttatgggatttagaggctcaagaggagatcctgcatcag
gaaggccacagcatgggtgtgtatgacattgccttccatcaagatggctctttggctggc
actgggggactggatgcatttggtcgagtttgggacctacgcacaggacgttgcattatg
ttcctagaaggccacctgaaggaaatctatgggataaatttctcccccaatggctaccac
attgcaactggcagtggtgacaacacctgcaaagtgtgggaccttcgacaacgacgttgt
gtctacaccatccctgctcatcagaacttagtgaccggtgtcaagtttgagcctatccat
ggagacttcttgctcacaggtgcctatgataacacagccaagatctggacccacccaggc
tggtccccattgaagactttggctggtcatgagggcaaagtaatgggcctagacatttct
tctgatgggcaactcatagccacttgctcatatgacaggaccttcaagctctggatggca
gagtag
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integrated database retrieval system
