Cricetulus griseus (Chinese hamster): 100753702
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Entry
100753702 CDS
T02813
Name
(RefSeq) nucleoporin NUP188 homolog isoform X4
KO
K14311
nuclear pore complex protein Nup188
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03013
Nucleocytoplasmic transport
cge05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100753702
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100753702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100753702
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100753702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
100753702
NCBI-ProteinID:
XP_027278978
UniProt:
A0A9J7JW67
LinkDB
All DBs
Position
6:141946467..142002078
Genome browser
AA seq
1761 aa
AA seq
DB search
MAAAAGGPCVRSSRELWTILLGRSALRELSQIEAELNKYWQRLLEGLSYYKPPSSSSAER
VKANKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDALKTVLQDERQSQA
LTLKIADYYYEERTCILRCVLHLLTYFQDERHPYRAEYADCVDKLEKELVLKYRQQFEEL
YRMEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMSPNDLLILTKMFK
DQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDG
LVCQDMDRVMLTLGDIPHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTR
LLRSLASGGNDCTTSTACMCVYGLLSFALTSLELHTLGNQQDVIDTACEVLADPSLPELF
WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELHKH
KPHDVLSHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT
LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL
TTVISPPVNVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAHPVSNMSQMISAEGMNA
GGYGNLLMNSEQPQGEYGVTVAFLRLVTTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHK
WRYNSHGVRELIGCLILELIHAILNLCQETDLHSSHTPSLPSLCICSLAYTEAGQTVISI
MGIGVDTIDMVMAAQPRSDGPEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA
LTQHGAHGNNLIAVLAKYIYHRHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDA
FLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGVWSCLH
VVLELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT
LSPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSSEKRFAYWSGYVK
SLAVYMAETEGSSCTSLLEYQMLVSAWRMLLIIATSHADIMHLTDVAVRRQLFLDVLDGT
KALLLVSTSVNCLRLGSMMCTLLLILLRQWKRELGAVDKILGPLTEVLEGVLQADQQLME
KTKAKVFSAFITVLQMKEMRVSEIPQYSQLVLNVCETLQEEVIALFDQTRHSLASGSAAE
DKDSMETDDCPRPRHKDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLLTTL
EVSLRMKQNLHFTEAALHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSSNGTGQA
PSTSRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERTLQCLNAVRTV
QSLACLEEADHTVGFILQLSHFRKEWHFHLPQLMRDVQVNLGYLCQACTSLLHSRKMLQH
YLQNKNGDGLPSAVTPRVHRPATTTTTTTTTTTTVLAVPSACSSKQPVADTEASEQRALH
TVQYGLLKILSRTLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFG
TLLATVNVALNMLGELDKKKESLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAVR
YLRDPAVHPRDKQRMKQELSSELSTLLSSLSRYFRRGTPSSPAAGVLPSPQGKATSLSKA
SPESQEPLIQLVHAFVRHVQR
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccgccggtgggccgtgtgtgaggagcagtagagaactgtggacaattcta
cttggaaggtcagctcttagagaactgagtcagattgaggcagaactgaataaatattgg
cagcggctgttagaagggctttcttactacaaacctcccagttcaagttcagctgaaaga
gtgaaagctaataaagatgtagcgtcaccgctgaaggaactgggcttacgaatcagcaag
ttcttgggtctggatgaagagcagagtgtgcagttactgcagtgttaccttcaggaggat
tacagggggactcgggatgcactcaagacggtcctgcaagatgagaggcagagccaggcc
ttaacccttaagattgcagattattactatgaagaaagaacctgcattcttcgttgtgtc
ttacatcttctgacatatttccaagatgaacgacatccctatagggctgaatacgcagac
tgtgttgacaaactggagaaggaactagttttaaaatacagacagcagtttgaggagctg
taccgaatggaagcaccgacctgggagacacatggcaatctaatgactgagcgccaggtg
tctcgatggtttgttcagtgtctccgggagcagtctatgctgctagaaattattttcctc
tattatgcgtactttgagatgtcgcccaatgacctactgatactaaccaaaatgttcaag
gaccaaggatttggtagtaggcagaccaatagacacctggtggatgaaaccatggatcct
tttgtagatcggattgggtacttcagtgccctcatcctggtggaaggcatggatatcgag
tccttgcacaagtgtgccttggatgacaggagagagctgcaccagtttgctcaagatggg
cttgtttgtcaggatatggatcgtgtgatgttgaccttgggagacattccacatcacgcc
cctgtacttttggcctgggctctcctccgtcacacactgaacccagaagagaccagcagt
gtggtcaggaaaataggtggcacagccatccagctgaatgtgtttcagtacttaactcga
ctgcttcggtcacttgccagtgggggaaatgattgtaccacaagcaccgcttgcatgtgt
gtctatggcctcctctcctttgctctgacctcactggagctgcacacgctgggcaatcaa
caggatgtaattgatacagcctgtgaagtcctggcagacccttctcttccagagttgttc
tggggaacagaaccaacctctggtcttggcatcattctggacagcgtgtgtgggatgttt
ccacatctcctgtccccacttttgcaattgctgcgagccttagtgtcagggaagtctact
gccaaaaaggtatacagtttcctggataagatgtctttttataatgaacttcataagcac
aagccccatgatgtgctctcccatgaagatggaactctttggcggaggcaaacacccaaa
ctcctgtaccctctagggggacagaccaacctccgaattcctcagggcactgtgggccaa
gtcatgctggatgatagggcttaccttgtacgctgggaatattcttacagcagctggact
ctcttcacctgtgagattgaaatgctactccacgttgtctccacagcagatgtgatccag
cactgccagcgggtgaagcccatcattgatttggttcacaaggtcattagtacagacttg
tccatagcagactgtctgctgcccatcacatcccgaatctacatgctgctgcagcggttg
acgacagtgatctcccctcctgtgaatgtcattgcttcttgtgtcaactgcttaactgtc
ttggctgctcggaatccagcaaaggtctggactgaccttcgtcacacaggctttttgcca
tttgtggcccaccctgtctccaacatgtctcagatgattagtgcggaaggaatgaatgct
ggagggtatggcaaccttctgatgaacagtgaacagccccagggcgagtatggagtcaca
gttgcctttctgcgcttggtcaccactcttgtcaagggtcagcttggcagtacccagagc
caaggcctggtaccctgtgtgatgttcgtgttgaaggagatgcttcccagctaccacaaa
tggcgctacaactctcatggcgtgcgggaactgattggttgcctaattctggagctgatt
catgcaatactgaacctgtgccaagagacagacctgcatagcagccacacgcccagcctt
ccttccctctgcatctgcagcctggcatatacagaagctggacaaacagtcatcagtatc
atggggattggtgtggacaccattgacatggtgatggctgctcaaccccgcagtgatggg
ccagaaggtcagggacaggggcaactgctgatcaagacagtgaaactggcattctctgtc
accaataatgttattcggctgaaacctccttctaatgtggtgtccccgctagaacaggct
ctcacacagcatggtgcccatgggaacaacctcattgctgtcctagccaagtacatctac
cacagacatgacccagctttgccacgtctggccatccagctgctgaaacgtctggccacg
gtggccccaatgtcagtgtatgcttgcctgggcagtgatgcagctgccattcgtgatgcc
ttcctgacccgccttcagagcaagattgaggacatgcgaatcaaagtcatgattctggag
ttccttacagttgctgtagagacgcagccaggtctcatcgagctgtttctgaatctggag
gtgaaggatggcagcgacggctcgaaggaattcagccttggtgtgtggagttgtctccat
gtagtgctggagctgattgattcccaacagcaagatcgatactggtgcccacccctcttg
catcgtgcagccattgccttccttcatgccctgtggcaagaccgtagggacagtgctatg
cttgtccttagaaccaaacccaagttttgggagaatttaaccagtccgctgtttggaact
ctttctcctccctcagagacatctgagcccagcattctggaaacctgtgccctaatcatg
aagataatatgtttggagatatactatgtagttaagggttcattagaccagtcactaaaa
gatacactcaagaagttttccagcgagaaacggtttgcctactggtcagggtatgtcaag
tctttggcagtttacatggctgaaacagagggcagcagctgcacgtccttgctggagtat
cagatgctggtctctgcctggaggatgcttctcatcattgccaccagtcatgcagacatc
atgcacttgactgatgtggctgtgcggcgccagctttttcttgatgtgcttgatgggacc
aaagcattactccttgtttcaacatcagtgaactgcctccgactcggctccatgatgtgt
actctgctgctcatcctccttcggcagtggaagcgagagttgggtgccgtggataaaatc
cttgggcccttgacagaggtcctggaaggtgtgctacaggcagaccagcagctcatggag
aagaccaaggccaaggtgttctctgcctttattacggtattacagatgaaggagatgaga
gtaagtgagatcccccagtactcccagctggtgctgaatgtctgtgagactctccaagaa
gaggtgatagcactgtttgatcagacccgccacagcctggcatcaggcagtgctgcagag
gacaaggacagcatggaaactgatgactgccctcggcctcggcacaaggaccagcgtgat
ggggtatgtgtcctgggactgcatctagctaaggagctttgtgaggtggatgaggatgga
gactcgtggctacaggtgactcgaaggctccctattctgcccacgctcctcaccaccctg
gaagtgagcctccgcatgaagcagaacctgcattttactgaggctgcactgcacctgctc
ctcaccctggctcgcacccagcagggagccacagcagtggctggagctggcatcacccag
agcatctgtttgcccctcctgagtgtgtaccagcttagcagcaatggcacaggacaggca
cccagcacttctcgaaagtccctggatgctccgtcctggccaggggtctaccgcctgtcc
atgtccttgatggagcggttgctcaagactctacgctacaatttcctgactgaggctcta
gactttgtgggtgtccatcaggaacggaccttacagtgtcttaatgcagtgaggacggta
cagagtctggcgtgcctggaggaagcagatcacactgtgggcttcatcctacaactgtcc
cacttcaggaaggagtggcacttccacctgcctcagcttatgcgtgatgttcaggtgaac
ctgggttacctgtgccaggcctgtacctccctcctacacagccgcaagatgctgcagcac
tacctacagaacaaaaatggagatggcctcccctcagccgtcactcctcgagttcatcgg
ccagccactaccaccaccaccaccaccaccaccaccaccacagttcttgctgtcccatct
gcctgctcctccaagcaacctgttgctgacactgaggcctcagagcagcgagccttacac
acagtccagtatggccttctcaagattctcagcaggaccctggcagccctgcgccacttt
actccagatgtctgccagatcctgctggaccagtccttggatctcgctgaatacaacttc
ctgtttgccctaagtttcaccactcccacttttgactctgaagtagccccctcttttgga
accctgttggccacagtgaacgtggccctcaacatgcttggagagctggacaagaaaaaa
gaatcccttacccaggctgtgggactcagcacacaagcagaaggaacccgaacattaaag
tccctcttgatgttcaccatggagaactgcttctacctgctcatctcccaggcagtccgc
tacctcagggatccggctgtgcacccccgggacaagcagcggatgaagcaggaactgagt
tcagagctgagcacgctgctttccagcctctcacgttacttcagaagaggaacccctagc
tcccctgctgctggagtcctgccctcaccgcaaggcaaggccacctctctctccaaagcc
agcccagaatctcaggagcccctgatccaacttgtgcacgcctttgttcggcatgtgcag
agatag
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integrated database retrieval system
