Cricetulus griseus (Chinese hamster): 100754275
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Entry
100754275 CDS
T02813
Symbol
Trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cge03016
]
100754275 (Trub1)
Enzymes [BR:
cge01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
100754275 (Trub1)
Transfer RNA biogenesis [BR:
cge03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100754275 (Trub1)
Prokaryotic type
100754275 (Trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
100754275
NCBI-ProteinID:
XP_027262698
UniProt:
G3IET4
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All DBs
Position
3:complement(3942276..3990841)
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AA seq
327 aa
AA seq
DB search
MAVAEAEVVSALTADSAGTAATPGAAAAPQAQLSKAALAAKLLSLSGVFAVHKPKGPTSA
ELLNRLKEKLLAEAGMPSPEWNKRQRQTLKIGHGGTLDSAAQGVLVVGIGRGTKMLTSML
SGSKRYIAIGELGKATDTLDSTGKVTDEKPYDKITQEDIEGILQKFTGNIMQVPPLYSAL
KKDGQRLSTLMKRGEAVEARPARLVTVYSIALLRFQPPLFTLDVECGGGFYIRSLVNDIG
KELSSCAHVLELTRTKQGPFTLEEHALPEDRWTIDDIAQSLEHCTSLLPDELAFKKPKSE
KSSDQALSYEYITLSETKREEDEIKTL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgctgaggcggaggtggtgtcagctctgactgcagactctgcagggacagcc
gccacccctggagccgcagccgccccgcaagcccagctctccaaggccgccctggctgct
aagctgttgtcgctcagcggcgtgttcgccgtgcacaagcccaaggggcccacgtcagcc
gagctgctcaatcggctgaaggagaagctgctggcagaagctgggatgccttccccagag
tggaacaagaggcaaaggcagacgttgaagattggacacggagggacgctggacagtgct
gcacaaggtgttctggtggttgggattggaagaggaacaaaaatgttgaccagtatgttg
tcggggtccaagagatacattgccattggagaattggggaaagcaaccgacacgctggat
tctaccgggaaggtaaccgatgagaagccatacgataaaataacacaagaagatattgaa
ggcattctgcagaagtttactgggaatataatgcaagtacccccactctactctgcactg
aagaaggatgggcagaggttgtcaacgctcatgaagagaggcgaagctgtggaggccaga
cccgccaggctagtgactgtgtacagcatcgccctcctgaggttccagccaccgctcttc
acactggatgttgaatgcggaggcggcttctacatcagaagcttggtcaatgacattggc
aaagaactctcttcctgtgcccacgtgctggagctgacccgcaccaaacaggggccgttt
acacttgaagagcatgccctccccgaagacagatggaccattgatgacatcgcacagtcc
cttgaacactgcacatctcttttgccagatgagttggcatttaaaaaaccaaaatctgag
aaatccagtgaccaggctttaagctatgaatacattactctaagtgagacaaagagggaa
gaggatgaaattaagacactctga
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