KEGG   Cricetulus griseus (Chinese hamster): 100754513
Entry
100754513         CDS       T02813                                 
Symbol
Polr2e
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge03020  RNA polymerase
cge03420  Nucleotide excision repair
cge04623  Cytosolic DNA-sensing pathway
cge05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:cge00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100754513 (Polr2e)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100754513 (Polr2e)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    100754513 (Polr2e)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100754513 (Polr2e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cge03021]
    100754513 (Polr2e)
   03400 DNA repair and recombination proteins [BR:cge03400]
    100754513 (Polr2e)
Transcription machinery [BR:cge03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     100754513 (Polr2e)
  RNA polymerase III system
   RNA polymerase III
     100754513 (Polr2e)
  RNA polymerase I system
   RNA polymerase I
     100754513 (Polr2e)
DNA repair and recombination proteins [BR:cge03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100754513 (Polr2e)
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 DUF7890
Other DBs
NCBI-GeneID: 100754513
NCBI-ProteinID: XP_027275211
UniProt: A0A9J7JS82
LinkDB
Position
5:complement(100834262..100839231)
AA seq 218 aa
MDDEEETYRLWKIRKTIMQTGDSLSLQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGR
PRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTP
SAKQSLVDMAPKYVLEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRESQLPR
IQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 657 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacctaccggctgtggaagatccgcaagaccatcatgcagaca
ggtgattctttgtctctgcagctgtgtcatgaccgtggctacctggtgacccaggatgag
ctggaccagacacttgaggagttcaaggctcagtttggggacaaacccagtgaaggaaga
cccaggcgcacagacctgacagtgctggtggcccacaacgatgatcccacagaccagatg
tttgtgttcttcccagaggagcccaaggtgggtatcaagaccatcaaggtgtactgccag
cgcatgcaggaggagaacatcactcgggcgctgatcgtggtgcagcagggcatgacgccc
tctgccaagcagtccctggtggacatggcccctaagtatgtgctggagcagttcctacag
caagagctgctcattaacatcacggaacacgagctggtccctgagcatgtggtcatgacc
aaggaggaggtgacagagctgctggctagatacaagcttcgtgagagccagctgcctagg
atccaggcaggggacccagtggcacgctactttggaatcaaacgaggacaggtcgtgaag
atcatccggcccagtgagacagctggccgctacatcacctaccgcctagtgcagtag

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