Cricetulus griseus (Chinese hamster): 100755349
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Entry
100755349 CDS
T02813
Symbol
Rad50
Name
(RefSeq) DNA repair protein RAD50 isoform X2
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03440
Homologous recombination
cge03450
Non-homologous end-joining
cge04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100755349 (Rad50)
03450 Non-homologous end-joining
100755349 (Rad50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
100755349 (Rad50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cge03032
]
100755349 (Rad50)
03400 DNA repair and recombination proteins [BR:
cge03400
]
100755349 (Rad50)
DNA replication proteins [BR:
cge03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
100755349 (Rad50)
DNA repair and recombination proteins [BR:
cge03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
100755349 (Rad50)
BRCA1-C complex
100755349 (Rad50)
NHEJ (non-homologous end-joining)
MRX complex
100755349 (Rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
ABC_tran
AAA_29
DUF2703
Motif
Other DBs
NCBI-GeneID:
100755349
NCBI-ProteinID:
XP_027283327
UniProt:
A0A9J7GEE0
LinkDB
All DBs
Position
7:complement(67795764..67857014)
Genome browser
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGEVVAVQRSMLCSQKSKKTEFKTLEGIITR
KKHGEKVSLSSKCAEIDREMISCLGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALDTLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLASSQEI
VKSYENELEPLKNRLKEIEHNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKEARLLNQEKAELLVEQGRLQLQADRH
QEHIRARDSLIQSLAAHLELDGFERGPFSDRQIKNFHELVRERQEREAKTASQLLNDLTE
KETLKQNQIDEIRDKKSGLGGMIELKTELLTKKQSELRNVKNELQQLEGSSDRILELDQE
LTKAERELNKAEKNSSVETLKAEVISLQNEKAELDRSLRKLDQEMEQLNHHTTTRTQMEM
LTKDKTDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKSHINNELKKKEEQLSSYEDKLFDVCGSQDFESDLGRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTETELQEVISDLQSKLRLAPDKLKSTESELK
KKERRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQSVNRDIQRLKTDIEEQETLLGTIMP
EEESAKVCLTDVTIMERFQMELRDVERKIAQQAAKLQGVDLDRTVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQISTNLQRRQQMEEQTVELSTEVQS
LYREIKDAKEQINPLETALEKFQQEKEELIHRKQTSNKMAQDKINDIKEKVKNINGYMKD
IENYIQDGKDDYKKQKETELNEVVAQLNECDKHKEKINKEMGTMRQDIDTQKIQERWLQD
NLTLRKRREELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIDTIKRNHSLALGRQKG
YEEEILHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRVRKNMDQCSEIVTCNINSLVSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattctgggcgtgcggagttttgggatagaggataaa
gataagcaaattatcactttcttcagccccctcacaattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtctaaagtatatttgtactggagattttcctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgtgcgagct
cagattcgcctgcagtttcgagatgtcaatggagaagtggtggctgtgcagaggtctatg
ctttgcagtcagaaaagcaaaaaaacagaatttaaaaccctggaaggaatcattactaga
aaaaagcatggtgaaaaagtcagtctcagctccaaatgtgcagaaattgaccgagaaatg
ataagctgtcttggggtttccaaggctgtgctaaataatgtcattttctgtcaccaagaa
gattccaactggcctttaagtgaaggaaaggccctgaagcagaaatttgatgagatcttt
tcagcaacaaggtacattaaagccttagatacacttcgacaggtacgtcagacacaaggt
cagaaggtaaaagagtgtcaaacagaattgaaatatctgaagcaaaataaggagaaagct
tgtgagattcgtgaccagattactagtaaggaagcccagttagcatcttcacaggaaatt
gtcaagtcctatgagaatgaacttgagccattgaagaatcgtctgaaagaaattgaacac
aacctctctaaaataatgagacttgacaatgaaattaaagccttggatagtcgaaagaaa
caaatggagaaagataacagtgagttagaacagaaaatggaaaaggtttttcaagggact
gatgagcaactgaatgacttgtaccacaatcaccagagaacagtgagggagaaagaacgg
cgcttggtagactgtcagcgtgaactggagaagttgaataaagaagcgaggctcctcaac
caagaaaaagcagaactgctggtggagcagggtcgtctgcagctacaggcagatcgccat
caagagcatatccgagccagagattcattaattcagtctttggcagcacatctcgaattg
gatggttttgagcgtggaccttttagtgatagacagattaaaaattttcatgaacttgtg
agagagagacaggaaagagaagctaaaactgccagccagctcttgaacgaccttacagaa
aaagaaactctgaagcagaatcagattgatgagataagggacaagaagagtggactggga
ggaatgattgagctgaaaacagaactcctcactaagaagcagagcgagctgaggaatgtg
aagaacgagctgcagcagctagagggctcatcagacaggatcctggagctggaccaggag
ctcacaaaagctgaacgtgaactaaacaaggctgagaaaaatagcagtgtagaaacccta
aaagcagaggtaataagcctccaaaatgagaaagctgagctggacaggagcttgcggaag
ctggaccaagagatggagcagttaaatcatcacacaacaacccgcacgcagatggagatg
ctgactaaagacaaaactgacaaagatgaacaaatcagaaaaataaagtctaggcacagt
gatgaactgacttcactgttagggtattttcctaacaaaaaacagctagaagactggctt
cattctaaatccaaagaaatcaatcagaccagggacagacttgccaaactgaacaaagaa
ctagcttcagctgaacagaataaaagccatataaataatgaactgaagaaaaaggaagaa
cagttatccagttatgaagataaactgtttgatgtttgtggtagccaggattttgaaagt
gatttaggcagacttaaagaagaaattgaaaagtcctcaaaacagcgagccatgctggct
ggagccacagccgtttactcccagttcattactcagctgacagatgaaaaccagtcctgt
tgcccagtctgtcagagagtatttcagacagagactgaattacaagaagtcatcagtgac
ttgcagtccaagctgaggcttgctccagataagctcaagtcaacagaatcagaactaaaa
aaaaaagaacggcgccgtgatgaaatgcttgggcttgtgcctatgaggcaaagcataatc
gatttgaaggagaaggaaataccagaattaagaaacaaactgcagagtgtcaatagagac
atacagcgcctaaagactgacatagaagaacaggaaacactcttgggtacaataatgcct
gaagaagaaagtgctaaagtatgcctgacagatgttacaattatggagaggttccagatg
gagctgagagatgttgaaaggaaaattgcacagcaggcagctaagctgcagggggtagac
ttggatcgaactgtccagcaggttaaccaggaaaaacaagaaaagcaacacaaactggat
acagtttctagtaagattgaattgaaccgtaagcttatacaggaccaacaggagcaaatt
caacacctgaaaagtaaaacaaacgagctgaaatcagagaaactgcagatatccacaaat
ttgcaacgtcgtcagcaaatggaggaacagactgtggaattatccactgaagttcagtct
ttatacagagagataaaggatgctaaagagcaaataaatcctttggagacagcactggaa
aagttccagcaggaaaaagaagaattaatccacagaaaacaaacaagcaacaaaatggct
caagataaaatcaatgatatcaaagagaaggttaaaaatattaatggttacatgaaagac
atagagaattatattcaagatggaaaagatgactataagaagcaaaaggaaactgaactt
aatgaagttgtggctcaactaaatgaatgtgacaaacacaaagaaaaaataaataaagaa
atgggaaccatgaggcaagatattgacacacagaagatacaggaaaggtggctacaggat
aaccttacactaaggaaaagaagagaggaactaaaagaagttgaagaagaaagaaaacaa
catttgaaggagatgggacaaatgcaagttttacaaatgaaaaacgaacatcagaagttg
gaagagaacatagacactataaaaagaaatcacagtttagctttggggcgacagaagggc
tatgaagaagaaattcttcactttaagaaggaactcagagaacctcagtttcgggatgcc
gaagagaagtatagagaaatgatgatcgttatgagaaccacagagctggtgaacaaggac
ctggacatctactacaagactcttgaccaagcaataatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgatctttggcggagtacctatcgtggacaagatatt
gaatacatagaaattcgatccgatgctgatgaaaacgtatccgcttctgacaagaggcgg
aattacaactaccgagtggtgatgctgaagggggacacagccttggacatgcggggacga
tgcagtgctggacaaaaggtgctagcctctctcatcatccgcttggcactggctgaaacc
ttctgtctgaactgtggcatccttgccttggatgagcccactacaaatcttgaccgagaa
aacattgaatctcttgcacatgctttggttgagatcataaaaagtcgctcgcaacagcgt
aacttccagcttttggtaatcactcatgatgaagattttgtggagctcttagggcgatct
gagtacgtggagaaattctacagggtgaggaagaacatggaccagtgctcagagattgtg
acatgtaacattaactccctggtctcttatgttcactaa
DBGET
integrated database retrieval system
