Cricetulus griseus (Chinese hamster): 100756329
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Entry
100756329 CDS
T02813
Symbol
Smarca4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03082
ATP-dependent chromatin remodeling
cge04714
Thermogenesis
cge05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100756329 (Smarca4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100756329 (Smarca4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100756329 (Smarca4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cge03021
]
100756329 (Smarca4)
03036 Chromosome and associated proteins [BR:
cge03036
]
100756329 (Smarca4)
Transcription machinery [BR:
cge03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100756329 (Smarca4)
Chromosome and associated proteins [BR:
cge03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
100756329 (Smarca4)
Chromatin remodeling factors
BAF complex
100756329 (Smarca4)
PBAF complex
100756329 (Smarca4)
GBAF(ncBAF) complex
100756329 (Smarca4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Htt_C-HEAT
DUF2009
Motif
Other DBs
NCBI-GeneID:
100756329
NCBI-ProteinID:
XP_027267365
UniProt:
A0A9J7JFN9
LinkDB
All DBs
Position
4:134495547..134596493
Genome browser
AA seq
1650 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPMPTQG
PGGYPQDNMHQMHKPMESMHEKGMPDDPRYNQMKGMGMRSGAHTGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGSDPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGSGPGPGP
GPGPAPPNYNRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPLVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFREYHRSVTGKLQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRDSEAGSSTPTTSTRSRDKDDDS
KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEY
YELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVF
TSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPS
RGSRAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccaccccttggtgggactcctcggcctggcccttccccaggccct
ggcccctcacctggtgcaatgctgggccctagccctggcccctcaccaggctctgcccac
agcatgatggggcccagcccaggacctccttcagcagggcaccccatgcccacccagggg
cctggagggtaccctcaggacaacatgcaccagatgcacaagcctatggagtccatgcac
gagaagggcatgcctgatgacccacgatacaaccagatgaaagggatgggcatgaggtca
ggggcccacacaggtatgggacccccgcctagtcccatggaccagcattcccaaggctac
ccttcacctctgggtggctctgaacatgcctccagtcctgtcccagccagtggcccatct
tcaggcccccagatgtcctctgggccaggaggggccccattagatggttctgacccccag
gccttggggcagcaaaaccgaggcccaaccccatttaaccagaatcagctgcatcaactc
agagctcagataatggcctacaagatgttggcccggggccagccattgcctgaccacctg
cagatggccgtgcaaggcaagcgaccaatgcctggaatgcagcagcagatgccaacacta
cctccaccctcagtgtctgccacaggacctgggcctggctctggccctggccctggccca
ggtccaggaccagctcctccaaattacaataggccccatggtatgggagggcccaacatg
cctcccccaggaccctcaggtgtgccccctgggatgcctggtcagcctcctggagggccc
cccaaaccatggcctgaaggacccatggccaatgctgctgcccccacaagcaccccacag
aagctgattcccccccaaccaacaggccgcccttcacctgcacctcctgctgtcccacct
gctgcctctcctgtgatgccgccacaaacacagtccccagggcagcccgcccagcctgct
ccattggtgcctctgcaccagaagcagagccgcatcacccccatacagaagccccggggc
ctggaccctgtggagatcctacaggagcgagagtacaggctgcaggctcgaattgcacat
cgaattcaggaacttgaaaatcttcctgggtctctggctggggacctgcgaaccaaagca
accattgaactcaaggcccttaggttgctgaacttccagaggcagctgcgtcaggaggtg
gtggtatgcatgcgcagagacacagccctagagacagccctcaatgccaaggcctacaag
cgcagcaagcggcagtcactgcgggaggcccgcatcactgaaaagctagagaagcagcag
aagattgagcaggaacgcaagcgccgccagaagcaccaggagtacctcaacagcatcctg
cagcatgccaaggacttcagggagtatcacagatcagtcacaggcaaactccagaaactc
accaaggctgtggctacctaccatgcaaatactgagcgggagcagaagaaagaaaatgag
cgcattgagaaggagcgaatgcggaggcttatggctgaagatgaggagggctaccgaaag
ctcattgaccagaagaaggacaaacgtttggcctacctcctgcagcagacggacgagtat
gtggccaacctcacagagttggtacggcagcacaaagctgctcaggttgccaaggagaag
aagaagaaaaagaaaaagaagaaggcagaaaatgctgaaggacagacacctgcgattggc
ccagatggtgagcctctggatgagaccagccagatgagcgacctccctgtgaaggtgatc
catgtagagagcggcaagatcctcaccggcacagatgccccaaaagctgggcagctggaa
gcctggcttgagatgaacccagggtatgaagtagctcccaggtcagatagtgaagaaagt
ggctctgaagaggaggaggaggaggaagaggaggagcagcctcagcccgcacagcccccc
acactgcctgtggaggagaagaagaagattccagacccagacagcgatgatgtctctgag
gtggacgcgcgacacattattgagaacgccaagcaagatgtggatgacgagtacggcgtg
tcccaggcacttgctcgtggtctgcagtcctactatgccgtggcccatgctgtcacagag
agagtagacaagcagtcagctctcatggtcaacggtgtccttaaacagtaccagatcaag
ggcttggagtggctggtgtccctgtataacaacaacctgaatggcatcctggctgatgag
atggggctgggaaagaccatccaaaccatcgcgctcatcacatacctcatggagcacaag
cgcatcaacgggcccttcctcatcattgtgcctctctcgacgctgtcaaactgggcatat
gaatttgacaagtgggccccctcagtggtgaaggtttcctacaagggatctccagcggca
agacgagcctttgtgccccagcttcgcagtgggaagttcaatgtcttgttgaccacctat
gagtatatcatcaaagacaaacatatcctggccaagatacgctggaagtacatgattgtg
gatgaaggccaccgcatgaagaaccaccactgtaagctgacacaggtcctcaacacacac
tacgtggctccaaggcgcctgcttctgacaggcacaccattgcagaacaagctacctgag
ctctgggcactgcttaacttcctgctgcccaccatcttcaagagctgcagcaccttcgaa
cagtggttcaatgcaccctttgccatgacaggagagaaggtggacctgaatgaagaagag
accatcctcattatccgtcgcctacacaaggtgctgcggcccttcctgctgcggcggctc
aagaaagaagttgaagcccagctacctgagaaggtggaatatgtcatcaaatgtgacatg
tcagccctgcagcgcgtgctctaccgtcacatgcaggccaaaggtgtgctactgactgat
ggctctgagaaggacaagaagggcaaaggtggcaccaagacactgatgaacactatcatg
cagctgcgcaagatctgcaaccacccctacatgttccagcacatcgaggagtccttttct
gagcacttggggttcaccggcggcatcgtgcaaggattggacctgtaccgtgcctcaggg
aaatttgaacttcttgatagaattctacccaaactccgtgcaaccaaccataaagtgctg
ctcttctgccaaatgacctcccttatgaccatcatggaagactactttgcataccgtggc
ttcaaatacctcaggctcgatggaaccacaaaagcagaggaccggggcatgctgctaaaa
acctttaatgagcctggctctgaatacttcatttttctgctcagtacccgtgctgggggg
ctgggcctcaacctgcagtcagctgacactgtgatcatctttgacagtgactggaatccc
catcaggacctgcaagcacaggatcgtgcccatcgaattgggcagcagaatgaggtgcgg
gtgctccgcctgtgcaccgttaacagtgtggaggagaagatcctggccgccgctaaatac
aaactcaatgtggaccagaaagttatccaggctggcatgtttgaccagaagtcatccagc
catgagcggcgagcctttctgcaggccatcctggagcatgaggagcaggatgagagcaga
cactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggc
gtcaaccccgacttggaggagccacctctaaaggaggaagatgaggtccccgatgatgag
actgtcaaccagatgattgcccggcatgaagaagagtttgacctctttatgcgcatggac
ttggaccgccggcgtgaagaggcccgcaaccccaagcggaagccacgcttgatggaagag
gatgagctcccatcctggatcatcaaggatgatgctgaggtagaacggctgacatgtgag
gaagaagaggagaagatgtttggccgcggttctcgccaccgcaaggaggtggactacagt
gactcactgacagagaagcagtggctcaagaccctgaaggctatcgaggagggcacgctg
gaggagatcgaagaggaggtccggcagaagaaatcctcacgcaaacgcaagcgggacagc
gaggccggctcctccaccccgaccaccagcacccgcagccgtgacaaagatgatgacagc
aagaagcagaagaagcgtggacggccacctgctgagaaactgtccccaaacccacctaac
cttaccaagaaaatgaagaagattgtggatgccgtgatcaagtacaaggacagcagtagt
ggacgtcagctcagcgaggtgttcatccaactcccctctcgcaaggagctgcctgagtac
tatgagctcatccgaaaacctgtggacttcaagaagatcaaggaaagaatccgaaaccac
aagtaccgcagcctcaatgacctggagaaggacgtgatgctgctttgtcagaatgctcag
acgttcaatcttgagggttctttgatctacgaggattccatcgtcctgcagtctgtcttc
accagtgtgcggcagaaaattgagaaggaggatgacagtgaaggcgaggagagtgaggag
gaagaggagggcgaggaggaaggctccgagtctgagtcccgctctgtcaaggtcaagatc
aagctgggccgaaaggagaaggcccaggaccgactgaaggggggccggcggcggccaagc
cgggggtcccgggccaagccagttgtgagtgacgacgacagtgaggaggaacaggaagag
gaccgctcaggaagtggcagcgaggaggactga
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integrated database retrieval system
