Cricetulus griseus (Chinese hamster): 100756465
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Entry
100756465 CDS
T02813
Symbol
Cic
Name
(RefSeq) LOW QUALITY PROTEIN: protein capicua homolog isoform X2
KO
K20225
capicua transcriptional repressor
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100756465 (Cic)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cge03000
]
100756465 (Cic)
Transcription factors [BR:
cge03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100756465 (Cic)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Cic_C
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
100756465
NCBI-ProteinID:
XP_035305096
UniProt:
A0A9J7KBA2
LinkDB
All DBs
Position
9:10016365..10043691
Genome browser
AA seq
2521 aa
AA seq
DB search
MKPMKKVCPGLAGSASGSKSPPATRAKALRRRGAGEGDKPEEEDEEAQPQEQTGPEEADE
GEEEEAERDPGAEGPPPELQPNDPTPGLAEDPKGDGEAGRWEPSLSRKTATFKSRAPKKK
YVEEHGAGSGGVGGAPEEHERTPEDASALGVPPRPPTSTRSSSTDTASEHSADLEDEPAE
ACGPGPWPSSTTSGGYDLRQLRSQRVLARRRDGLFLPAVVRQVRRSQDLGVQFPGDRALT
FYDGMSGGGVDVVLDATPPPGALMVGTAVCTCVEPGMAAYREGVVVEVATKPAAYKVRLS
PGPSSHPGPPGPLPQAQQPLHREPEEAVWVTRSSLRLLRRPWDPEALLRKHPAGPEEEQA
EPGVTLPPCPSSLEPKQPEDAEVSNISFGSNLGTHCEEGEEKHPPALGTPVLLPLPPPQL
LSPPPKSPAFAGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGAAPAARARTPLTAAQQKY
KKGDVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLADGGPG
GTGRPAGVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECEAAV
MLVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRTAVRSR
HLSASTPKAGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTELLPH
PGTLGASGAGGGGAAPDFPKGDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRSRQPSP
LLLLSPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPGEASEARAGGPGRGCR
ETAVPPGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPTLGLASSPFQPVAFHPSPAA
LLPVLVPSSYPSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQP
SEAQQPASHPVASNQSKEPAESAAVAHEQPPGGAGSADPGRPPGATCPESPGPGPPLTVG
SVDPGKSLPPTTEEEAPGPPGESRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLS
ALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILG
EWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPASLGLAGGHKET
RERSMSETGTAAAPGVSSELLSVAAQTLLSSDTKPPGSGPCGAERLHTVGGPGSARPRAF
SHSGVHSLDGGEVDSQALQELTQMVSGPTSYSGPKPSSQYGAPGSFAAPGEGGTLATSGR
PPLLPSRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDSFGTTDIDLKCKERVTDSE
SGDSSGEDPEGNKGFGRKVFSPVIRSSFTHCRPTLDPEPPGPPDPPAAFGKGYGPTPSSS
SPASTSVSTSFSLGSGTFKTQESGQGSTAVPLRPPPPGAGGPTTPSKATRFLPTDPATFR
RKRPESVGSLEAPGPSVIAAPPSAGGNILQTLVLPPSKEEREGSGTRVPSAPAPAPAPAP
ALAYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPPSGRAEASSNDTVGARTEMGT
GSRVPGGSPLGVSLVYSDKKSAAATSPAPHLVAGPLLGTVGKAPATVTNLLVGTPGYGAP
ASSAVQFIAQGAPGSATPAGSGASAGSGPNGPVPLGILQPGALGKAGGITQVQYILPTLP
QQLQVAPAPAPAPGTKAAAPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTAGIPILQSVP
SAPPPKAQSVSPVQATPSGGSAQLLPGKVLVPLAAPSMSSVRGGGAGQPLPLVSSPFSVP
VQNGAQQPSKIIQLTPVPVSTPSGLVPPLSPATMPGPTSQPQKVLLPSSTRITYVQSAGG
HTLPLGTSPACSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSAGQAPLLAPGQVGV
SPVPSPQLPPACTAPGGPVITAFYPGSPAPTSAPLGPPSQAPPSLVYTVATSTTPPAATI
LPKGPPASATATPAPTSPFPSATAGSMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGSFE
SGTTGRPGPTPRQSLDSGAAREPAAPESELEGQPPPPVPPPPPETWPAARSSPPPPLPAE
ERPGTKGPETASKFPSSSSDWRVPGLGLESRGEPPAPPSPAPAPATVPSGSNSGSGSGSS
EGSSGRAAGDTPERKEVTGSVKKMKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRP
EEVLPSPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTP
KSAKCEGDIFTFDRTGTETEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSA
QATAAFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPGPPPTGMAATP
VPTPSPAGGPDPTSPGSDSGTAQTAPPLPPPPEPGPGQPGWEGAPQPSPPPSGPSTAATG
R
NT seq
7566 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatgaagaaagtgtgccctggccttgcaggttctgccagcggcagcaagtcc
ccaccagctaccagggccaaggctttgagacggcgaggggccggggagggtgacaagcca
gaggaggaggatgaggaagcacagccacaggagcagacagggccagaagaggctgacgaa
ggcgaggaagaggaggctgagcgggaccctggagctgaggggccacctccagagctgcag
cccaatgaccctactccaggcctagctgaggaccccaagggagatggggaggcaggccgc
tgggagccttcactcagtcgcaagacagccacattcaagtctcgagccccaaagaagaag
tatgtggaagaacacggtgctggaagcggcggtgtggggggagcccctgaagagcacgag
cggacccctgaggatgctagtgccctgggtgtacctccacggccacccacctccacccgg
tcctcctctactgacacagccagtgaacactcagctgacctggaggatgagccggctgag
gcttgtggtccaggcccctggccctctagtaccaccagtggtggctatgaccttcggcaa
ctgaggtctcagcgggtgctggctcggcgtagggatggcctcttcttgcctgctgttgtg
cgccaggtgcgccgtagccaggacctaggtgtgcagttccctggggaccgggccttgact
ttctatgacgggatgtccggtggtggtgtggacgtggttttggatgccacgccacctcca
ggtgcactgatggtgggcacagctgtctgtacctgtgtagaacctggtatggctgcctac
cgagagggtgtcgtggtggaagtggccactaaaccagctgcctataaggtccgcctcagt
cctggccccagctcccacccaggcccaccaggccctctgccacaagcccaacagccgctg
caccgtgagcctgaggaggctgtatgggtcacccgttctagcctgcgcctgcttcgccgg
ccctgggaccctgaggccttgctgaggaagcaccctgcaggtccagaggaagagcaggct
gagcctggggtcactttgcctccttgcccttcttccttggagcccaagcagccagaggac
gctgaggtctccaacatcagctttggtagcaatctgggaactcactgtgaggagggtgag
gagaaacacccaccagccctgggcaccccagtcctgctcccgctgcctccaccccagctc
ctgtcaccacccccaaaatccccagcctttgctggccctggtcgccctggcgagcagcct
tcgccctgccaggaaggaagccagggtggcagccggagcagcagtgtggcctcgctggag
aagggcgccgcaccagcagcccgtgcccgcacgccattgacagctgctcagcagaaatac
aagaagggtgatgtggtctgcacacccaatggcatccggaagaagttcaatggcaagcaa
tggcgccggctctgctctcgggatggctgcatgaaggagtcccaacggcgggggtactgc
tcccgccacctttccatgagaaccaaagagatggagggcctggcagatggtgggccaggt
gggactgggcggcctgccggtgtggcagcccgtgagggaagcactgagtttgactggggt
gatgagacttcgagggacagtgaagccagcagtgtggcagcccgaggagactcccgccca
cgcctggtagcgcctgccgacctgtcacgctttgaatttgatgagtgtgaggcggctgtg
atgctggtgtcactgggcagctcccggtcaggcacgccttccttctcaccggtctctaca
cagtcgcctttctcaccagctccgtccccctcaccctcaccactcttcggctttcgccct
gccaacttcagccccataaatgcctcgcccgtcatccaacgcactgctgttcgtagccgc
cacctgagcgccagcaccccaaaggcaggtgtgctgacaccaccagacctgggcccccat
ccaccgccacctgcccctcgagagcgccattcctctggcatcctacccactttccagacc
aacctaaccttcactgtgcccattagccctggtcgaaggaagacggaactgttgccccac
ccagggacattgggggcctctggggcaggaggtggaggagctgccccagatttccccaag
ggggacagcttagactctggagtggactcagtgtcccatacacctaccccttccacgcca
gctggcttccgggccgtgtcccctgctgtgcccttctctcgctcccgccagccttcaccg
ttgctgctgttgtccccacctgctggactcacctcagacccagggccttctgtgcgaagg
gtacctgctgtgcagagggactcacctgtcattgtccgaaaccctgatgtgccactgccc
tccaaattccctggagaggccagtgaggcacgggccgggggacctgggcggggttgccgt
gagaccgcagtgccccctggggtggccagcgggaaacctggcctgcccccacctctgcct
gctccagtgcccatcactgtgcctccagccgcgccaactgctgtggcccagccgatgccc
accttgggcctggcttcttcacccttccagcccgtggcctttcacccttcacctgctgcc
ctgttgccagttctagtgcccagcagctatcccagccaccctgcccccaagaaggaagtc
atcatgggcaggcctggaacagtgtggacaaatgtggaacctcgttctgtggctgtgttc
ccctggcactccttagtccccttcctggcacccagccagccagacccctctgtgcagcct
agtgaggcccagcaacctgccagccaccctgtggcctctaaccagagcaaagaacctgct
gaatcggcggctgttgctcatgagcaaccaccaggaggggcggggagcgctgaccctggg
cgacctcctggagccacatgccctgagagcccagggcctggacctccactcactgtgggg
agtgtggatcctggtaaaagtcttcctcccaccactgaggaggaggcccctggcccccca
ggagagtcccggctggacagcgagacagagagtgatcatgatgacgccttcctctccatc
atgtctcccgagattcagctgcccctgccacctggaaagcgccggacccagtccctgagt
gctctgcccaaggaacgagactcatcttctgagaaggatggacggagtcctaataagcgg
gaaaaggaccatatccgtcggcccatgaatgccttcatgatcttcagcaagcggcaccgg
gccttggtccaccaacggcaccccaaccaggataaccggactgtcagcaagatcctggga
gagtggtggtatgccctggggcccaaggagaagcagaaataccacgatctggccttccag
gtgaaagaggcacacttcaaggcccacccagattggaagtggtgcaacaaggaccgaaag
aagtccagctcagaggccaagcccgcgagcctggggctggcaggagggcacaaggagacg
cgggaacggagcatgtcggagacgggaactgctgctgcccctggggtgtcttctgagctc
ctgtccgttgcagcccagacactcctgagctcggacaccaagcctccagggagtggcccc
tgtggagcagaacgactacacacggttggggggcctggctcagcccgacccagagccttc
tctcacagtggggtccacagtcttgatggtggggaagtagacagccaagcactgcaagaa
ctgacccagatggtgtctggccctacgtcatactccggcccaaagccttcctcccagtat
ggcgctccagggtcttttgcagctcctggtgaaggaggtaccttggccactagtgggcgg
cccccactgttgccctcccgagcctctcgttcccagcgtgcagccagtgaggacatgacc
agtgacgaggaacgcatggtcatctgtgaggaagaaggggacgatgatgtcatcgctgat
gacagctttggcaccactgacattgatctcaagtgcaaggaacgggtgactgacagtgag
agtggggacagctctggggaggacccagagggcaacaagggctttggccgtaaggtgttc
tcacctgtcatccgctcctcttttacccattgccgtccaaccctggaccctgagcctcca
ggccctccggatccacctgcagccttcggcaaaggctatggtcccaccccgtcgtcatcc
tcacctgcttccacctcagtctccacctccttttcactgggctctggaacctttaagacc
caggagtctggccagggcagcacagcagtcccactacggcccccacctcctggagccggg
ggcccgacaacaccttccaaagccactcggtttcttcctacggatcctgccaccttccgg
cgcaagagacctgaaagtgttggtagcctggaggcgccggggccctcagtcattgcagca
cctcccagtgcaggaggaaacattctgcagacactggttctgccccccagcaaggaggaa
cgggagggcagtggcacacgggtgccctccgccccagccccagccccagccccagcccca
gccctggcttatggggctccagcagcccctctgtcccgccccgctgccaccatggtcacc
aatgtggtacggcctgtcagcagcactcctgtgcccattgcctctaagccttttcccccc
tctggccgggctgaggcatcttccaacgacaccgtaggtgccaggactgaaatgggcact
gggtctcgggtgccggggggctccccattgggtgtcagtttagtgtattcagataagaag
tcagcagcagccacctcaccagctccacacttggtagctggacccctgttgggcactgtg
gggaaggcaccggctactgtcaccaacctgctggtgggcaccccaggctatggggctcct
gcatcgtctgctgttcagtttattgcccagggagccccaggcagtgcgacccctgcaggc
tcaggagcaagtgctgggagtggccccaatgggccagtacccctgggcatcctgcagcca
ggtgccctaggcaaggcagggggaatcacccaggtgcagtacatcctgcccacactgccc
cagcagcttcaagtggcacccgccccagcaccagcacctgggaccaaggcagcagctccc
agtggccctgcacccaccaccagcatccgtttcaccctccctccgggcacctccaccaac
ggcaaggtcctggctgctacagcacccactgctggcatccctatcctgcagtccgtacct
tccgccccacccccgaaagcccaatcagtttctcctgtccaggccacaccttctggtggc
tcagcccagctgcttcctgggaaggtgctagttcccctggctgcccctagcatgtcgtca
gttcgaggtggaggggctggccagccactgcccctggttagctcgcctttctcagtacct
gtccaaaacggtgcccagcaacctagcaagattatccagctgactcccgtgccagtgagc
acacctagcggtctggtgccacccctgagcccagccacaatgccgggacccacatcacag
cctcagaaggtcctgttaccctcttccacaaggatcacttatgtgcagtcagcagggggg
cacactctgcctctgggtaccagtcctgcatgcagtcaggctggaacagtgacctcatac
gggcccaccagctctgtagctctgggcttcacatcgctggggcccagtggtcctgccttc
gtacagcccctgctctcagcaggccaagctccattgctggctcctggccaggtgggcgtg
tcacctgtgcctagcccccagctgcctcctgcctgcacagcccctggaggtcccgtcata
acagcgttttaccctggcagccccgcacccacctcagcacccctgggcccaccttcccaa
gctcctccaagcctggtctacactgtggccaccagcaccaccccacctgctgctaccatt
ctgcccaagggcccaccagcctctgccactgccactccagcccccactagtcctttccct
agtgccacagcaggctccatgacctacagcttagtggctcccaaggctcagaggcccagc
ccaaaggccccccagaaggtgaaggcagccatcgccagcattcccgtggggtcttttgag
tcaggcaccactgggcggcctggacctacaccccgacagtctctggactctggtgcagcc
cgagaaccagctgccccagaatcagagcttgaggggcagcccccgcccccagtcccccca
cctcccccagagacctggcctgctgcccggagcagtcccccgccacccctgcctgctgag
gagcgacctggcaccaaaggccctgagactgccagcaaattccccagctcatcttcagac
tggagagtccctgggctgggcctggagagtcgtggggagcctcccgctcctcccagccca
gcgcctgctcctgcgacagtccctagtgggagcaacagtggcagtggcagtggcagcagt
gagggcagtagtgggagggcagctggggacacacctgagcgcaaggaagtgactggttct
gtgaagaagatgaaggtgcggcccccacccctgaagaagacctttgactctgtggacaac
agggtcctgtcagaagtggactttgaagagcggtttgctgagctgcccgagtttcggcca
gaggaggtgctgccctcacccaccctgcagtctctggccacctcgcctcgggccatcctt
ggctcctatcgcaagaagaggaagaactccactgacctggactcggcgcctgaggacccc
acctcgcccaagcgcaagatgaggagacgttcgagctgtagctccgaacccaacaccccg
aagagtgccaagtgcgagggtgacatcttcacctttgaccgcacaggcactgagactgag
gacgtgctcggggagctggagtatgagaaagtgccctactcctcactgcggcgcaccctg
gaccaacgcagggccctggtcatgcagctcttccaggaccatggcttcttcccatcagcc
caggccacagcagccttccaagcccgctatgcagacatcttcccatccaaggtgtgtctg
cagctgaagatccgagaggtccgacagaagatcatgcaggcagccactcccacagagcag
ccccctggggctgaggcccctctccccggaccacccccaactggcatggctgctactcct
gtccccactcccagccctgctgggggtcctgatcccacctctccaggctcggactctggc
actgcccaaactgcccctccactgcctccacccccagaacctgggcctggacagcctggc
tgggagggggctccccaaccctccccacctccctccggcccctccacagctgccacaggc
aggtga
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integrated database retrieval system
