Cricetulus griseus (Chinese hamster): 100756637
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Entry
100756637 CDS
T02813
Symbol
Ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cge03041
]
100756637 (Ddx1)
03016 Transfer RNA biogenesis [BR:
cge03016
]
100756637 (Ddx1)
Enzymes [BR:
cge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100756637 (Ddx1)
Spliceosome [BR:
cge03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100756637 (Ddx1)
Transfer RNA biogenesis [BR:
cge03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
100756637 (Ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Paramyxo_PNT
Motif
Other DBs
NCBI-GeneID:
100756637
NCBI-ProteinID:
XP_027280447
UniProt:
A0A8C2M6G7
LinkDB
All DBs
Position
7:complement(22924423..22949412)
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATRGLLKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPAHIKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVGLSKAPDSYIVKSQHTGNAQVSQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRMHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDKLWERLGKNHIRTDDVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSNRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgagatgggtgttatgcctgagattgcacaagctgtggaagagatg
gattggcttctgccaactgatatccaagcagaatctatcccactaatcctaggaggaggt
gatgtacttatggcagcagaaacaggaagtggaaaaactggtgcctttagtattccagtt
atccagattgtgtatgagaccctgaaagaccaacaggaaggaaagaaagggaaaactact
atcaaaaccggagcttcagtgctcaacaaatggcagatgaacccatatgacagagggtct
gcttttgcaattgggtcagatggcctgtgttgtcagagcagagaagtgaaggaatggcat
gggtgcagagccactagaggattgctgaaagggaaacactactatgaggtatcctgtcat
gaccaagggctgtgcagagttgggtggtctaccatgcaggcctccttagacctaggtact
gacaagtttggatttggcttcggtggaacagggaagaaatcccataataaacagtttgat
aattatggagaggaattcactatgcatgataccattggctgctacttggatattgataaa
gggcatgtgaaattctctaagaatggaaaagaccttggtctggcatttgaaataccagca
catataaaaaaccaagccctcttccctgcctgtgttttgaagaatgctgaattgaaattt
aactttggtgaagaagaatttaagtttccaccaaaagacggttttgttggtctttccaag
gccccagatagttacatcgtcaagtcgcagcacacaggtaatgcacaggtgtcacaaaca
aaatttctccctaatgctccaaaggctctcattgtggagccatccagggagttagctgag
caaaccttgaacaacgtcaagcagtttaagaagtatattgataaccctaagttacgggag
cttctcataattggaggtgttgcagctcgggatcagctctctgttttggacaatggggtt
gatattgttgtcggtactccaggaagattagatgatttggtttcaactggaaagctcaac
ttgtctcaagttagattcttggttctggatgaagcagatggacttctctctcaaggttat
tctgactttatcaacaggatgcatagtcagattcctcagattacttctgatggaaaaaga
cttcaggtgattgtttgctctgccactttgcattcttttgatgtaaagaaactatctgag
aagataatgcattttcccacgtgggttgatttgaaaggggaagattctgttccagatact
gtgcaccatgtcgtcgtccctgtaaatcctaaaactgacaagctctgggaacggcttggg
aagaaccatattcgaactgatgatgtacacgcaaaagataacacaaggcctggtgctaac
agtccagagatgtggtctgaagctattaaaatacttaagggagagtatgctgtccgagca
atcaaggaacacaagatggatcaagcaattatcttctgtagaactaaaattgactgtgat
aacttggagcagtactttatgcaacaaggaggaggacctgataaaaaaggacaccagttc
tcatgtgtgtgtcttcacggtgacagaaagcctcatgagagaaagcaaaacttggaaaga
tttaagaaaggagacgtaagattcttgatttgcacagatgtagctgctagaggaattgac
atccatggtgttccatatgttatcaatgtcaccctgcctgatgagaagcagaattacgtg
catcggattggcagagtggggcgagctgaaaggatgggcctagccatttccctggtggca
acagaaaaagaaaaggtttggtatcatgtgtgcagcaaccgtgggaaaggatgctataac
acgaggctcaaggaagatggaggctgtaccatctggtacaatgaaatgcagctgctttct
gagatagaagagcatctgaactgcaccatttcccaggttgagccagatataaaagttcca
gtggatgagtttgatgggaaagttacatatgggcaaaagagggctgctggcggtggaaac
tataaaggccatgtggatatcttggcacctaccgttcaagagttggccgcccttgaaaag
gaagcacagacatctttcctgcaccttggctaccttcccaaccagctgttcagaaccttc
tga
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