Cricetulus griseus (Chinese hamster): 100756749
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Entry
100756749 CDS
T02813
Symbol
Dhx16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X2
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100756749 (Dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cge03041
]
100756749 (Dhx16)
Enzymes [BR:
cge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100756749 (Dhx16)
Spliceosome [BR:
cge03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100756749 (Dhx16)
Complex C
U4/U6.U5 tri-SnRNP related factors
100756749 (Dhx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_30
AAA_19
SecA_DEAD
Flavi_DEAD
nSTAND3
Cas3-like_C_2
SRP54
Motif
Other DBs
NCBI-GeneID:
100756749
NCBI-ProteinID:
XP_027244353
UniProt:
A0A8C2LR22
LinkDB
All DBs
Position
1
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AA seq
1045 aa
AA seq
DB search
MATPAGLERWVQEELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRDTETLDLGGPAR
DFALRLWSKVPRKAVVEKPARAAEREARALLEKNRSYKLLEDSESGEEAVGSDSSSLQKK
RKRRKHLRKKHHEEEEEDEEEVSEAGKRKTGDSKSPTEEKPASEDEWERTERERLQDLEE
RDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAK
REREKLEDLEAELADEEVLFGDVELSRHERRELKYKRRVRDLAREYRAAGEQEKLEATNR
YHMPKETRGQPARAVDVVEEESGAPGEEQRRWEEARLGAASLKFGARDAAAQEPKYQLVL
EEDETIEFVRAAQLQGDEEPSSVPPPSAQAQQKESIQAVRRSLPVFPFREELLAAIASHQ
VLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNE
VGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLI
KDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACV
VSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQ
ARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK
ASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLM
HFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSC
SEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQ
WCYENFVQFRSMRRARDVREQLEGLLERVEVGLTSCQGDYIRVRKAITSGYFYHTARLTR
SGYRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY
KAKELEDPHAKKMPKKVGKTREELG
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggcggggctggagcggtgggtgcaggaggagctgcactcggtgctgggg
ctgagcgagcggcacgtcgcgcagttcctgatcggcaccgcgcagcgctgcgcctcggcc
gaggagttcgtgcagcggctgcgagacaccgaaactctggaccttggcgggccggcgcgg
gacttcgcgctcaggctctggagcaaggtaccacggaaggctgtggtagaaaagccagct
cgggcagctgagcgagaggcccgagccctgctggagaagaaccgatcttataagttgctg
gaagacagcgagagcggggaggaagcggtgggcagcgattcgagcagcctccagaagaag
cggaaaagacggaaacacctcaggaagaaacaccacgaggaggaggaagaggacgaggaa
gaggtttctgaggcagggaagaggaagacgggggacagtaagtcacccacggaggagaag
ccggcctcagaggatgagtgggagcggacagagcgcgagcgtcttcaggacttggaggaa
cgggatgcgtttgcagagcgggtgcggcagagggacaaggaccggacccggaatgtcctg
gagcgatcagataagaaggcttatgaagaggctcagaaacgcctcaagatggctgaggaa
gaccggaaagccatggtccccgagcttcgcaagaagtctcgccgcgagtacctggcaaag
cgcgagcgggagaagctggaggacctggaggcagagctggcggatgaggaggtcctgttt
ggggacgtggagctgagccggcacgagcgcagggagctcaagtacaagcgtcgagtgcgg
gacctggcccgggagtaccgggcggccggcgagcaggagaagctggaggccaccaaccgg
taccatatgcccaaggagactcggggacagccagctcgagctgtggacgtcgtggaggag
gaatcgggcgccccaggagaggagcagcggcgctgggaggaggcccggctaggtgctgca
tccctcaagttcggggccagggacgccgccgcccaggagcccaagtaccagctggtgctg
gaggaggacgagaccatcgagttcgtccgagccgctcagctgcagggagacgaggagccg
tcgtcagttccacccccatcagcccaggcccagcagaaggagtccatccaggctgtccgc
cgcagcctgcccgtgttccccttccgagaggagctcctggccgccatcgccagccaccaa
gtcctcatcatcgaaggcgagaccggctccgggaagaccacacagatcccgcagtacctc
ttcgaggagggctacacaaagaagggtatgaagattgcttgtacccagccccgaagagtg
gcggccatgagcgtggctgccagagtggcccgggagatgggtgtgaagcttgggaatgag
gttggctacagcatccgctttgaggactgcacatcagagcgaaccgttctccgctacatg
acggatgggatgctgctacgggagttcctctctgaacccgaccttgcaagctacagcgtg
gtgatggtggatgaagctcatgaacggaccctgcacacagacattctcttcgggttaatt
aaggatgttgctcgattccgacccgagctcaaggtcctggtagcttcagccacgctggac
actgcccggttttccaccttcttcgatgacgcccccgtcttccgaatccctggacgcagg
tttccagttgacatcttctataccaaggccccagaggccgactacctggaagcctgtgtg
gtgtctgtgctgcagatccacgtgactcagccccctggggatatactggtgttcctgacc
ggacaggaggagattgaggccgcctgtgagatgctccaggaccgttgccgccgtctgggt
tccaaaatccgggagctcctggtgctgcccatttatgccaacctgccctcagacatgcag
gcccgaatcttccagcccacaccccctggggcccgcaaggtggttgtggcaacaaacatc
gcagaaacgtcgctcaccatcgaaggcatcatttacgtgctggacccagggttctgcaag
cagaagagctacaatccccgcacgggcatggagtctctcaccgtcacaccctgcagcaag
gcctctgccaatcagcgggctggccgtgcaggccgggtcgccgcggggaagtgcttccgc
ctgtacacagcctgggcctatcagcacgagctcgaggagaccacggttcccgagatccag
aggacaagcctgggcaatgtggtgctgctgctgaagagcctagggatccacgacctgatg
cactttgacttcctggaccctccaccctacgagaccctgctgttggctttggaacagctt
tatgcactgggagccctcaaccacctgggggaacttaccacgtctggtcgaaagatggcg
gagctgcctgtggatcccatgctgtctaagatgatcttggcctctgagaagtacagctgt
tcagaagagatcctgacagtggctgctatgctgtctgtcaacaactccatcttctaccgg
cccaaggacaaggtggtccatgccgacaacgcccgtgtcaacttcttcctccctggtggg
gaccacctggttctgctcaatgtgtacacacagtgggcggagagtggctactcttctcag
tggtgctatgagaactttgtacagttcagatccatgcgccgagcccgggatgtgcgggaa
cagctggaggggctcctggagcgcgtggaagttggcttgacgtcctgccaaggagactac
attcgtgtgcgcaaggccatcacttcgggttatttttaccacaccgcgaggctgactcgg
agtggctaccgcacagtgaagcagcagcagacagtgtttattcatcccaactcctctctc
tttgaacaacagccacgctggttgctttaccatgagcttgtcttgaccacaaaggagttc
atgagacaggtcctggagattgagagcagctggctcttggaagtggccccccactactat
aaggccaaggaactagaagatccccatgctaagaaaatgcccaaaaaagtaggcaagaca
cgagaagagctgggctag
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