Cricetulus griseus (Chinese hamster): 100757992
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Entry
100757992 CDS
T02813
Symbol
Srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X2
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03013
Nucleocytoplasmic transport
cge03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100757992 (Srrm1)
03015 mRNA surveillance pathway
100757992 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100757992 (Srrm1)
03041 Spliceosome [BR:
cge03041
]
100757992 (Srrm1)
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100757992 (Srrm1)
Spliceosome [BR:
cge03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
100757992 (Srrm1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
100757992
NCBI-ProteinID:
XP_027255471
UniProt:
A0A9J7FEP5
LinkDB
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Position
2
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AA seq
931 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASLKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKSPELPEPSVRTKDSSVQEATS
TSDILKAPKPEPVPEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRH
RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRDAGSEMNALFHRRRR
SSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSSPTTPPPK
TRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKG
SKMAAADSVQQRRQYRRQNQQSSSDSGSSSTSEDERPKRSHVKNGEVGRRRRHSPSRSAS
PSPRKRQKETSPRMQMGKRWQSPVTKSGRRRRSPSPPPARRRRSPSPAPPPPPPPRRRRS
PTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPK
RRVSHSPPPKQRSPPVTKRRSPSLSAKHRKGSSPGRSTREARSPQPNKRHSPSPRPRAPQ
TSSPPPARRGASASPQGRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSARRVSSSRSV
SGSPEPAAKKAPAPPSPVQCQSPSTNWSPAVPVKKAKSPTPSPSPARNSDQEGGGKKKKK
KKDKKHKKDKKHKKHKKHKKEKAVAVATAAPATPAAISAATTTSAQQEPVAATEPRKETE
SEAEDNLDDLERHLREKALRSMRKAQVSPQS
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcggagcaggataatcggttcagcaacaaa
cagaagaaactcctcaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaaagagtaactgaaatcctt
ggatttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactggatttttgaatgggaaaaacgctcgagaa
ttcatgggagaactgtggcccctgctgttgagtgcacaagagaacatcgccggcatcccc
tctgctttcctagagttgaagaaggaggaaatcaaacagcgacaaattgaacaagaaaaa
ttggcatctctgaaaaaacaagatgaagataaagataagagggataaggaagaaaaagaa
agcagcagagaaaaaagggagcggtcccgaagcccaagaagacgaaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcactctcgatct
ccccgtcacagaaccaagagccggagcccttcccctgccccagaaaagaaggagaaatct
ccagagctcccagaaccgtcagtgagaacaaaagactcttcagtacaggaggccacatct
acaagtgacatcctgaaagctcccaagcctgagcctgtaccagagcccaaagaaccttct
ccagaaaaaaattccaaaaaggaaaaggaaaagacacgaccacgatctcgatcacgttcc
aaatcacgatctcggacccgttctcgatcaccttctcatactagaccaagacgacgacat
agatcccgatcaagatcatactctcctagaaggcggccaagcccaagaaggagaccatct
cctcgaagaagaactccaccaagacggatgcctcctccaccaagacacaggaggagtaga
tctccaggcagacgggatgcaggcagtgagatgaatgctctattccacagaaggaggcgt
tcttctgcatcgttgtctggaagtagctcttcgtcttcgtcatctcgttcccggtcaccg
ccaaaaaagcctcccaagaggacctccagcccacctcggaaaactcgtaggttatctcct
tctgcaagtcctccaaggcgaaggcacagaccatcatctccaacaactccaccacctaaa
actcgccattcccccaccccccagcagtcaaaccgcacaagaaaaagtcgtgtttctgtg
tctccaggaagaacttcgggtaaagtgacaaaacataaaggtactgagaaaagagagtca
ccttcaccagcacccaagcctagaaaggtggagttgtctgagtctgaagaagacaaaggc
agcaagatggctgcagccgattctgtgcaacagagacgccagtatagacgacagaaccag
cagtcttcatctgactctggctcctcttccacctcagaagatgagcggcccaagagatcc
catgtgaagaatggtgaggtaggcaggcggcggagacattctccttctcggagtgcatct
ccatcacctcgaaagcgccaaaaagagacttcccctcggatgcagatgggaaaacgatgg
caatcgccagtgactaaaagtggtagaaggaggagaagtccctctccaccaccagccaga
aggcgacgatctccttctccagctcctcctccccctcctcctcctcggcggcgtagatct
cccaccccaccaccacgaagaaggactccttctcctcccccacgccgccgttcaccttct
ccaagaagatactctcctcccatccagaggagatactctccttccccgcctccgaagagg
agaaccgcctcgcccccacccccgcccaagcgaagggcatcaccatctccaccaccaaag
cgccgagtctcccactctccaccacccaaacaaagaagccccccagtcaccaagagacgc
tcgccctccttgtctgcaaagcacaggaaaggctcttccccaggccgctctacccgggag
gcccggtcaccacaaccaaacaaacggcattcgccctcaccacgtcctcgagctcctcag
acctcaagtcctccccctgctcgaagaggagcatcggcgtcaccccaaggaaggcagtcc
ccgtcgccaagtactaggcctattaggagagtctccaggactccggagccgaaaaagatt
aaaaaggctgcctcaccaagccctcagtccgccagaagggtttcctcttcccgatctgtc
tctggatctcctgagccagcagctaaaaaggccccagcacctccatctcctgtccagtgt
cagtcgccctccaccaactggtcccctgcagtgcccgtcaaaaaggctaaaagcccaaca
ccaagcccgtcccctgcaaggaattctgatcaagaaggaggtggaaagaagaagaagaaa
aagaaggacaagaaacacaaaaaggataagaaacacaagaagcacaaaaaacacaagaag
gagaaggctgtggctgtagccactgcagctcctgccacccctgcagctatttctgctgcc
acaaccacatcagcacagcaagagcctgtggcagccacagagcccaggaaggagactgaa
agtgaagctgaggacaaccttgatgacttagagaggcaccttcgggaaaaggcccttcgg
tccatgcggaaggctcaagtgtccccacagtcctag
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