Cricetulus griseus (Chinese hamster): 100758071
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Entry
100758071 CDS
T02813
Symbol
Ift57
Name
(RefSeq) intraflagellar transport protein 57 homolog isoform X3
KO
K04638
intraflagellar transport protein 57
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge05016
Huntington disease
cge05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100758071 (Ift57)
05022 Pathways of neurodegeneration - multiple diseases
100758071 (Ift57)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cge03037
]
100758071 (Ift57)
Cilium and associated proteins [BR:
cge03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
100758071 (Ift57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT57
MCPsignal
Mod_r
MG280
DUF4407
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
100758071
NCBI-ProteinID:
XP_027268349
UniProt:
A0A8C2QD44
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All DBs
Position
4:complement(41409692..41464235)
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AA seq
429 aa
AA seq
DB search
MAAAAAVIPPTGLEDGVSRARGEGAGEAVVERGPGAAYHMFVVMEDLVEKLKLLRYEEEL
LRKSNLKPPSRHYFALPTNPGEQFYMFCTLAAWLINKTGRTFEQPQEYDDPNATISNILS
ELRSFGRTADFPPSKLKSGYGEHVCYVLDCLAEEALKYIGFTWKRPSYPVEELEEETVPE
DDAELTLSKVDEEFVEEETDNEENFIDLNVLKAQTYRLDTNESAKQEDILESTTDAAEWS
LEVERVLPQLKVTIRTDNKDWRIHVDQMHQHKSGIESALKETKGFLDKLHNEISRTLEKI
GSREKYINNQLEHLVQEYRGAQAQLSEARERYQQGNGGVTERTRVLSEVTEELEKVKQEM
EEKGSSMTDGTPLVKIKQSLTKLKQETVQMDIRIGVVEHTLLQSKLKEKCNMTRDMHAAV
TPESAIGFY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggcggcagcagtgatcccgccgacgggcttggaggatggggtgtctcgggct
cgcggggaaggcgcaggggaggcggtggtggagcgcgggcccggcgcggcctaccacatg
ttcgtggtgatggaggacctggtggagaagctgaaactgctccgctacgaggaagagctc
ctccgaaagagcaatctgaagcccccgtccagacactactttgctctgcctaccaaccca
ggtgagcagttctacatgttttgcactcttgctgcttggctgatcaacaaaacagggcgt
acctttgagcagcctcaagaatacgacgatcccaatgcaactatatctaacatactctcc
gagcttcgctcatttgggaggactgcagattttcctccttcaaaactaaagtctggttat
ggagaacatgtatgctatgttcttgattgtttagctgaagaagcattaaaatatattggt
ttcacttggaaaaggccatcatatccagtggaagaattagaagaagaaactgtcccggaa
gatgatgcagaattaacattgagtaaagtggatgaagaatttgtggaagaggagacagat
aatgaagaaaacttcattgatctcaacgttttaaaggcccagacctatcgcttggacaca
aacgagtctgccaaacaagaagatattttggagtctacgacagatgctgcggaatggagt
ctagaagtcgagcgtgtactaccgcaactgaaagtcacgatcaggactgacaataaggat
tggaggatccatgttgaccaaatgcatcagcacaaaagtggaattgaatctgctctaaag
gaaaccaagggatttttggacaagctccataatgaaattagccggactctggaaaagatt
ggtagccgagaaaagtacatcaacaatcaacttgagcacttggttcaagaatatcgtggg
gcccaggcccagctgagtgaggcaagggagcgctaccagcagggaaatggcggagtaacg
gaaaggaccagagtcctgtctgaggttacagaagaattagagaaggtgaaacaagagatg
gaagagaagggcagcagcatgacagatggcactccattggtgaagattaagcagagctta
accaaactgaagcaagaaaccgttcagatggacattaggattggggttgtggagcacact
ctactgcagtccaagctgaaggaaaagtgcaatatgactcgagacatgcacgcggctgtt
accccggaatcagcgattggcttctattaa
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