KEGG   Cricetulus griseus (Chinese hamster): 100758240
Entry
100758240         CDS       T02813                                 
Symbol
Pnn
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge03013  Nucleocytoplasmic transport
cge03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cge00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100758240 (Pnn)
   03015 mRNA surveillance pathway
    100758240 (Pnn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cge03019]
    100758240 (Pnn)
   03041 Spliceosome [BR:cge03041]
    100758240 (Pnn)
Messenger RNA biogenesis [BR:cge03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100758240 (Pnn)
Spliceosome [BR:cge03041]
 Complex C
  Other components
   EJC/TREX
    100758240 (Pnn)
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 100758240
NCBI-ProteinID: XP_027275458
UniProt: A0A8C2M8W9
LinkDB
Position
5:complement(143471139..143480086)
AA seq 726 aa
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EDQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEAGVVHSDAEKEQEEEEHKQ
EMEAKMEEETEVREGEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMETNQVESIEPSENE
TSKELEPEMEFDVEPDKECKSLSPGKENVNSLHVEKESEEKEEKEDKEPEPQPEPMAQLL
PPPQPLPQSQPHPQLHSQPQPVLQSQPLTQPETLPLAVLQPPPQVIQEQGNLLPERKDFP
IESIKLPEMPVEPVLTVHSENKNKNKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSS
SGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSDSRSRSRGRGHNRDRKHRRSMD
RKRRDTSGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSD
RKDKRR
NT seq 2181 nt   +upstreamnt  +downstreamnt
atggcggtcgcggtgagaactttgcaggagcagctggagaaggccaaagagagcctcaag
aacgtagacgagaacatccgcaagctcaccgggcgggacccaaatgatgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctaaggcgtggattctcagatagtggaggaggacccccagccaaacagagagacctggaa
ggggcagtcagtaggctgggtggggagcgtcggacaagaagagaatcacgccaggaaagc
gacccagaagatgatgatgtcaaaaagccagcactgcagtcttctgttgtagctacctcc
aaagagcgtacacgtagagacctcatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttgttgatgggcacccttcaaaaattcaaacaagaatct
accgttgcaactgaaaggcaaaagagacgtcaagaaattgaacaaaaacttgaagttcag
gctgaagaggagagaaagcaggttgaaaatgagaggagagaactgtttgaggagagacgt
gctaagcagacagaactgcgacttctggaacagaaagttgagcttgcacagctgcaagaa
gaatggaatgagcataatgccaagataattaagtatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaagctaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaccagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaggcaggagaggaagaggaaaag
gaagcaggtgtagttcatagcgatgcagagaaagagcaggaggaggaggaacacaagcag
gaaatggaggctaagatggaggaggaaactgaggtaagagaaggtgagaagcaacaggat
agtcagccagaagaagttatggatgtgttagagatggttgagagtgtcaaaaatgtaatt
gctgagcaggaagtaatggagactaatcaagttgaaagtatagaaccttcagaaaatgaa
actagcaaagaattggagccagagatggagtttgatgttgagccagataaagaatgtaaa
tctctttctcctggaaaagagaatgttaattctctgcatgtggaaaaggagtctgaggaa
aaagaggaaaaagaagataaagaacctgagccccaacctgagcctatggctcagcttctg
cccccacctcagcccctgccccagagccagccccaccctcagctgcactctcagccccaa
cctgtgctccagtcccagcctctcactcagcctgagactttgccattagcagttttgcag
cctccacctcaggttattcaggagcaagggaatctactgcctgagcggaaggattttcct
atagagtctataaaactccctgagatgcctgtagagccagtcttgacagtacattcagaa
aacaaaaataaaaacaaaactaggagcagaagcagaggtcgagcaagaaataagacaagt
aagagtagaagccgcagcagtagcagcagtagttccagtagcagttctaccagtagcagc
agtgggagcagttccagcagtggcagcagcagtagtcggagcagttcgagtagcagttcc
agcaccagtgggagcagcagcagagacagcagcagcagcactagcagtagcagtgacagt
agaagtcgcagtaggggccgaggacataaccgagatagaaagcacaggaggagcatggac
cggaagcgaagggacacttcaggactagaaagaagtcacaaatcttccaaaggtggtagt
agtagagatacaaaaggatcaaaggataagaattcccgatctgacagaaaaaggtctata
tcagaaagtagtcgatcaggcaaaagatcttcaagaagtgaaagagaccgaaaatcagac
aggaaagacaaaaggcgttaa

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