Cricetulus griseus (Chinese hamster): 100758240
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Entry
100758240 CDS
T02813
Symbol
Pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03013
Nucleocytoplasmic transport
cge03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100758240 (Pnn)
03015 mRNA surveillance pathway
100758240 (Pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100758240 (Pnn)
03041 Spliceosome [BR:
cge03041
]
100758240 (Pnn)
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100758240 (Pnn)
Spliceosome [BR:
cge03041
]
Complex C
Other components
EJC/TREX
100758240 (Pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
100758240
NCBI-ProteinID:
XP_027275458
UniProt:
A0A8C2M8W9
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Position
5:complement(143471139..143480086)
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AA seq
726 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EDQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEAGVVHSDAEKEQEEEEHKQ
EMEAKMEEETEVREGEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMETNQVESIEPSENE
TSKELEPEMEFDVEPDKECKSLSPGKENVNSLHVEKESEEKEEKEDKEPEPQPEPMAQLL
PPPQPLPQSQPHPQLHSQPQPVLQSQPLTQPETLPLAVLQPPPQVIQEQGNLLPERKDFP
IESIKLPEMPVEPVLTVHSENKNKNKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSS
SGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSDSRSRSRGRGHNRDRKHRRSMD
RKRRDTSGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSD
RKDKRR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcggtgagaactttgcaggagcagctggagaaggccaaagagagcctcaag
aacgtagacgagaacatccgcaagctcaccgggcgggacccaaatgatgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctaaggcgtggattctcagatagtggaggaggacccccagccaaacagagagacctggaa
ggggcagtcagtaggctgggtggggagcgtcggacaagaagagaatcacgccaggaaagc
gacccagaagatgatgatgtcaaaaagccagcactgcagtcttctgttgtagctacctcc
aaagagcgtacacgtagagacctcatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttgttgatgggcacccttcaaaaattcaaacaagaatct
accgttgcaactgaaaggcaaaagagacgtcaagaaattgaacaaaaacttgaagttcag
gctgaagaggagagaaagcaggttgaaaatgagaggagagaactgtttgaggagagacgt
gctaagcagacagaactgcgacttctggaacagaaagttgagcttgcacagctgcaagaa
gaatggaatgagcataatgccaagataattaagtatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaagctaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaccagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaggcaggagaggaagaggaaaag
gaagcaggtgtagttcatagcgatgcagagaaagagcaggaggaggaggaacacaagcag
gaaatggaggctaagatggaggaggaaactgaggtaagagaaggtgagaagcaacaggat
agtcagccagaagaagttatggatgtgttagagatggttgagagtgtcaaaaatgtaatt
gctgagcaggaagtaatggagactaatcaagttgaaagtatagaaccttcagaaaatgaa
actagcaaagaattggagccagagatggagtttgatgttgagccagataaagaatgtaaa
tctctttctcctggaaaagagaatgttaattctctgcatgtggaaaaggagtctgaggaa
aaagaggaaaaagaagataaagaacctgagccccaacctgagcctatggctcagcttctg
cccccacctcagcccctgccccagagccagccccaccctcagctgcactctcagccccaa
cctgtgctccagtcccagcctctcactcagcctgagactttgccattagcagttttgcag
cctccacctcaggttattcaggagcaagggaatctactgcctgagcggaaggattttcct
atagagtctataaaactccctgagatgcctgtagagccagtcttgacagtacattcagaa
aacaaaaataaaaacaaaactaggagcagaagcagaggtcgagcaagaaataagacaagt
aagagtagaagccgcagcagtagcagcagtagttccagtagcagttctaccagtagcagc
agtgggagcagttccagcagtggcagcagcagtagtcggagcagttcgagtagcagttcc
agcaccagtgggagcagcagcagagacagcagcagcagcactagcagtagcagtgacagt
agaagtcgcagtaggggccgaggacataaccgagatagaaagcacaggaggagcatggac
cggaagcgaagggacacttcaggactagaaagaagtcacaaatcttccaaaggtggtagt
agtagagatacaaaaggatcaaaggataagaattcccgatctgacagaaaaaggtctata
tcagaaagtagtcgatcaggcaaaagatcttcaagaagtgaaagagaccgaaaatcagac
aggaaagacaaaaggcgttaa
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