Cricetulus griseus (Chinese hamster): 100758711
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Entry
100758711 CDS
T02813
Symbol
Cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X3
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cge03016
]
100758711 (Cdkal1)
Enzymes [BR:
cge01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
100758711 (Cdkal1)
Transfer RNA biogenesis [BR:
cge03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
100758711 (Cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
100758711
NCBI-ProteinID:
XP_027265116
UniProt:
A0A8C2LWA2
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Position
3:complement(250008082..250570861)
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AA seq
581 aa
AA seq
DB search
MPSASCDALLDDIEDIFSQEESKPQDRHFSRKHVFPKVRRRNTQKYLQEEPRPPSDSTIP
GIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHFRN
SIRKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQ
KKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVER
AKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVAVIPEGAMLRLGMTNPPYILEH
LEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKRVVDFLKEKVPGITIATD
IICGFPGETDQDFQETLKLVEEYKFPSLFINQFYPRPGTPAAKAEQVPAHVKKQRTKDLS
RVFHSYNPYDHKIGERQQVLVTEESFDSKFYVAHNRFYEQVLVPKNPEFMGKMVEVDIYE
SGKHFLKGQPVLDTKIYTPSISKPLAKGEVSGLTKEFRNRFGNHLTSPSDTCAATLRDSA
YSRIVLQMSQHDCALWVAAGLALTALLFAFLARVYAYNVTK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcatcctgtgatgcactgctggatgacatagaagacatcttctcacaggaa
gagtcaaagccacaagacagacatttctcaagaaagcatgtgtttcctaaagtacgaagg
cggaatacccaaaaatatttgcaagaggagcccaggccaccaagtgacagcactattcca
ggcatacagaaaatttggatacgaacatggggctgctcacataataattcagatggagaa
tacatggctggacagctggctgcttatggctataaaattacagaaaatgcgtcagatgca
gatttgtggctcctgaacagttgtactgtgaaaaacccagctgaagaccatttcagaaac
tcaatcagaaaagctcaagaggagaataagaaaattgtcctagctggctgtgttccccaa
gcccagcctcgtcaggactacctcaaaggactgagcatcattggggttcagcagattgat
cgtgtggtagaagttgtggaggaaacaattaaaggtcactcagtgagactcctaggccag
aagaaagacaatggaaagcggttggggggagcaagactggatttaccaaagatcaggaag
aatccactgatcgaaataatttcaatcaacacggggtgtctcaatgcttgtacttactgc
aaaactaaacatgccagaggaaacctggccagttatcccattgatgaacttgtagagaga
gccaagcagtcttttcaagagggagtctgtgagatatggctgaccagcgaagacactgga
gcctacggcagagacattggcacagatctccccacactcctatggaagctggtggcagtg
attcctgagggagccatgctgaggctgggcatgacaaacccaccatatattttagagcat
ctggaggaaatggcgaaaatcctcaaccaccccagagtctatgcttttcttcacatccca
gtgcagtccgcctctgacagtgtgctcatggacatgaagagagagtactgcgtggctgac
ttcaaaagagttgtggattttctcaaagagaaggttcctggaataacaattgctacggat
attatctgtggttttcctggagaaaccgatcaggattttcaagaaacactgaaacttgtt
gaagagtacaaattcccaagcctcttcatcaaccagttttatccaagacccggaactccc
gctgccaaagccgaacaagttccagcacatgtgaaaaagcaaaggacaaaagatctctct
cgggtgtttcattcctacaatccatatgatcacaagattggtgaaagacaacaagtgcta
gtaacagaagaatcttttgactccaagttttatgttgcacataatcgattctatgagcag
gttttagtgccaaagaaccctgaattcatggggaaaatggttgaagtagacatttatgaa
tcaggaaaacactttttgaaaggacagccagtattggacaccaaaatctacacgccatcc
atcagcaagccactggccaagggagaagtgtcgggtttgacaaaggaattcagaaatagg
tttggaaatcatctgacttcaccttcagacacctgtgctgcaactctgcgtgactcggca
tactccagaattgtgctgcagatgtcccaacatgactgtgcattgtgggtagctgcaggc
ctggctctcactgctcttctttttgcatttctggccagagtctatgcttacaatgtaact
aaatga
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