Cricetulus griseus (Chinese hamster): 100758811
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Entry
100758811 CDS
T02813
Symbol
Cpsf3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100758811 (Cpsf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cge03021
]
100758811 (Cpsf3)
03019 Messenger RNA biogenesis [BR:
cge03019
]
100758811 (Cpsf3)
Transcription machinery [BR:
cge03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100758811 (Cpsf3)
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100758811 (Cpsf3)
U7-dependent histone pre-mRNA processing factors
100758811 (Cpsf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
100758811
NCBI-ProteinID:
XP_027280496
UniProt:
A0A8C2LYA8
LinkDB
All DBs
Position
7:complement(27389225..27418572)
Genome browser
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEVMLQDIFGEDCVSVKDDSVLSVTVDGKTANINLETRIVECEEGSE
DDESLREMVELAAQRLYAALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgatccctgcagaggaaagcgaccagctgctgatccgacccctcggtgctggg
caagaagtgggaagatcatgcattattctggagttcaaaggaagaaaaatcatgctggac
tgtgggatccaccctggcctggaaggaatggatgctctaccttacattgatctcatcgat
ccagccgagatcgaccttctgctaatcagtcatttccatctggatcactgtggtgctctg
ccctggttcctccagaagacaagcttcaaaggacggacttttatgacgcatgccacaaag
gctatttacagatggcttctctcagactatgtcaaagtcagcaacatatcggcagatgac
atgctgtacactgagacagacttggaagaaagtatggacaaaatcgaaaccattaacttc
catgaagtgaaagaggtggcaggaatcaagttctggtgctaccatgctggccatgtcctg
ggagccgccatgtttatgattgagattgcaggtgtgaagctgttgtatacaggtgatttt
tcgagacaagaagacagacacctaatggctgccgaaattcctaatattaagccagacatt
cttatcatcgaatctacatatgggacccacatccacgagaagcgtgaagagcgagaagca
aggttctgcaacactgtgcacgacattgtcaacagaggaggcaggggtctcattcctgtc
tttgctctcggaagagctcaggagctgctgctgattctagatgagtactggcagaaccac
ccggaactgcatgacattcccatttactatgcgtcgtctctggccaagaagtgcatggca
gtgtaccagacctatgtgaacgccatgaatgacaagatccgaaagcagatcaacatcaac
aacccctttgttttcaagcacattagcaacctcaagagcatggatcactttgacgacatc
ggccccagtgttgtaatggcctctccaggcatgatccaaaacggcttatccagagagctg
tttgaaagctggtgtacagataagaggaacggcgtcatcatcgcagggtactgtgtagaa
gggacacttgccaagcacatcatgtctgaacctgaagaaatcaccaccatgtctggacag
aagttgccactgaaaatgtcggttgattacatttctttctctgctcatacagattaccag
caaaccagtgaatttatacgtgctctgaagcctcctcatgtgattttagtccatggggaa
cagaatgaaatggccaggctgaaagcagctctgatcagagaatatgaagataacgatgaa
gttcacatcgaggttcacaatcctcggaacacggaggcagtgaccctgaacttcaggggg
gagaagctcgccaaggtcatgggctttttggcagacaagaaaccagaacagggccagcgg
gtctctggaattcttgttaaaagaaactttaattaccacatactttctccctgtgacctc
tcaaattacactgacctggccatgagcactgtgaaacagacccaggccatcccttatact
gggccctttaatttgctgtattaccagctacagaaattgacaggtgatgtagaagaatta
gaaattcaagaaaaacctgctctgaaggtgttcaagaatatcactgtcatacaggagcca
ggcatggtggttctggagtggctggcaaacccctctaacgacatgtatgcggacacagtg
accaccgtgatactggaagttcagtcgaatccaaaaataaggaaaggtgcggtgcagaag
gtctctaagaagttagagatgcacgtttatagcaagaggctggaggtcatgctgcaggac
atatttggagaagactgtgtcagtgtgaaagatgactctgtcctcagtgtcacagtggac
gggaaaacagcgaatattaatttggagactcggattgtagaatgtgaagaaggcagtgaa
gatgatgagtccctcagagaaatggtggaactggctgcccagaggctgtatgcagccctg
acacctgtgcactga
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