KEGG   Cricetulus griseus (Chinese hamster): 100759040
Entry
100759040         CDS       T02813                                 
Symbol
Ctcfl
Name
(RefSeq) transcriptional repressor CTCFL
  KO
K23195  transcriptional repressor CTCF
Organism
cge  Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:cge00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cge03000]
    100759040 (Ctcfl)
   03036 Chromosome and associated proteins [BR:cge03036]
    100759040 (Ctcfl)
Transcription factors [BR:cge03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    100759040 (Ctcfl)
Chromosome and associated proteins [BR:cge03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    100759040 (Ctcfl)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_16 zf-H2C2_5 zf-C2H2_15 zf-C2H2_ZN142 zf-C2H2_7th_ZNF462 zf-LYAR C2CH-3rd_BIRD-IDD zf-C2H2_11 GAGA
Other DBs
NCBI-GeneID: 100759040
NCBI-ProteinID: XP_027279060
UniProt: G3HBK9
LinkDB
Position
6:6210231..6234909
AA seq 665 aa
MAAAEVPVPSEHFTQIKEQKLKPGDLEEEKEEGGVQRMEAQEGAVEAEAVPCQLLDAAAG
LQKDQPELPLWVPAVESDRRVLTLQTVHLTSQDVQLQGLGWLSVPHSEFPVTIPQEESFL
PLPSVLWLEQESQPSLQHCMTVSIPEELYQPEDVGLTHFQLLQQSVPAAEEDPELTPNSG
GSAAQTKFEDEEQDQLLPEAGEPDTKEEEKFLFVEMTPNDEKRDEIVLTISHLSLEEQQD
QSAPKQTSAPNAETTKPPERGKGKTRTFQCEFCPFTSSKFSTFTRHVKIHNDERPHLCHL
CLKGFRTVTLLRNHVNTHTGTRPYKCGDCGMAFVTSGELVRHRRYKHTHEKPFKCSICKY
ASVEASKLKRHIRSHTGERPFQCCQCTYASKDTYKLKRHMRTHSGEKPYECPTCHARFTQ
SGTMKIHVAQKHGENVPKHECPHCATVIARKSDLRVHLRNLHSHSPVEIKCRYCPAGFHE
RYALIQHQRSHKNEKKFKCKQCDYACKQERCLKAHVRTHTGEKPFSCLDCSKHFRQKQLL
TVHLRKYHDPSFVPDVHLCLKCDKGFSRWSNLQRHRKKCDPEHEKLATSRKASQVMQKQT
VEETPGWDNDVATQESHTSKEAQCPGELALCHHGGGGGGGGESAAGSENMDEGLTCEMLF
NMMDK
NT seq 1998 nt   +upstreamnt  +downstreamnt
atggctgctgctgaggtccctgtcccttctgagcatttcacccaaatcaaagagcagaag
ttgaagcctggagacctggaagaggaaaaggaggagggtggggtacaaagaatggaagcc
caggagggtgctgtcgaggcggaggccgtgccctgtcagcttctggatgcagcagccggg
ctccagaaagaccagcctgagctgcctttgtgggtcccggcggtggagagcgataggcgg
gtcctgaccctgcagacggtgcacctgacctcccaggatgtgcagctgcaggggctgggg
tggctgagcgtgccccactcggagttcccggtgacgataccacaagaggagagcttcctg
ccattgccatccgtgctgtggctggaacaagagtcccagcccagcctccagcactgcatg
accgtcagtatcccggaggagctgtaccagcctgaggacgtcgggctgacacattttcaa
ctgctgcagcagagtgtgccggcggccgaggaggacccagagttaacgccaaactcgggc
ggaagcgcagcccagacgaagtttgaagacgaggagcaggaccagctgttacccgaggcg
ggagaaccagatacgaaagaagaagagaagttcctttttgtggaaatgacaccaaacgat
gaaaagagagatgagatcgttctgaccatttcccatctgagcctggaagagcagcaagat
caatcagcgccaaagcagaccagtgcgccgaacgctgagaccaccaaacctccagagagg
ggcaaaggaaaaacccgaaccttccagtgtgaattctgtccattcacttcttccaaattc
tcgactttcacccgtcacgtgaaaattcataacgacgagagacctcacctgtgccacctg
tgcctgaagggtttccgcacagtcaccctccttcggaaccacgtcaatactcacacagga
accaggccctacaagtgcggggactgtggcatggcatttgtcaccagcggggaactggtc
cggcacaggcgttacaaacacactcatgagaagcccttcaagtgctccatctgcaagtat
gccagtgtcgaggcaagcaagctgaagcgccacatccgctcacacacgggtgagcgtccc
ttccagtgctgccagtgcacttatgccagcaaggacacctacaagctgaagcgccacatg
cggacccactcaggtgagaagccttatgagtgccccacctgccatgcccggttcacccag
agtggcaccatgaaaatccacgtggcacagaagcatggcgagaatgtgcccaaacacgag
tgtccccactgtgctaccgtcattgcaaggaagagcgacctgcgtgtccatctgcgcaac
ctgcacagccacagccccgtggagatcaagtgccgatactgtcccgccggcttccatgag
cgctacgccctcatccagcaccagaggtcccataagaatgagaagaagttcaagtgcaaa
cagtgtgattacgcatgcaagcaggagcggtgcttgaaggcgcacgtgcgcacgcacaca
ggagagaagccgttctcctgcctcgactgcagcaaacacttccggcagaagcagctgctt
accgtgcacctgaggaagtaccacgatccgagctttgtccctgacgtgcacctatgcctc
aagtgtgacaaaggcttttcccgctggagtaacctgcagagacaccggaagaagtgtgac
ccagagcatgagaagctggccacctccagaaaagcaagtcaggtgatgcagaagcagacc
gtggaggaaacaccaggatgggacaacgatgtcgctacccaggagagccatacctcgaag
gaggcacagtgccctggggagctggctctgtgccaccatggtggcggtggtggtggtggt
ggcgaaagtgcggctggaagcgagaacatggatgaaggcctgacctgcgagatgctcttt
aacatgatggataagtga

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