Cricetulus griseus (Chinese hamster): 100759595
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Entry
100759595 CDS
T02813
Symbol
Ddx18
Name
(RefSeq) ATP-dependent RNA helicase DDX18 isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cge03041
]
100759595 (Ddx18)
03009 Ribosome biogenesis [BR:
cge03009
]
100759595 (Ddx18)
Enzymes [BR:
cge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100759595 (Ddx18)
Spliceosome [BR:
cge03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100759595 (Ddx18)
Ribosome biogenesis [BR:
cge03009
]
Eukaryotic type
90S particles
Helicases
100759595 (Ddx18)
Pre-60S particles
100759595 (Ddx18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
100759595
NCBI-ProteinID:
XP_027273582
UniProt:
A0A9J7JSD0
LinkDB
All DBs
Position
5:67013672..67026701
Genome browser
AA seq
657 aa
AA seq
DB search
MSQLQMKILRKKIEKRNVKLRQRNQKLQAEAWDSSESQPQDGAVLKEGKVKKAKKHSVSV
DSADAQSGGMPEETVGNSKVKKLPQKPTTLTNGETAATPSPDSEPKKKKKKKRKMGNDAG
PDTKKSKTEENAGAHEEAESSVEKPNDREVPSLPLGLTGAFEDTSFASLSNLVNENTLKA
IEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMPRNGTG
VLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLINGINIIVATPGRLL
DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPVRRQTMLFSATQTRKVED
LARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKVMVFFS
SCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGILLCTDVAARGLDIPE
VDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQSKVPLNQFDF
SWSKVSDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSF
GFKVPPFVDLNVSSHDGKLKKRGGGGGFGYQKSKKAEKSKIFKHISKKSADRRQFSH
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaattacagatgaaaatcctgcgcaaaaagatcgagaagcggaacgtcaagctg
cggcagcggaaccagaagctgcaagcagaagcatgggattcaagcgaatcacaacctcaa
gatggagctgtgcttaaagaaggaaaagttaagaaagccaaaaagcattctgtgagtgtg
gactcggcagatgcacagagtggaggcatgcctgaagagacagtggggaactcaaaagtt
aaaaaattacctcaaaaacctaccactttaacaaatggtgaaacagcagcaacgccatct
cctgattcagaaccaaaaaagaaaaagaagaaaaagaggaaaatgggaaatgatgcaggg
cctgacaccaaaaaatcgaaaacggaagaaaatgctggggctcacgaggaagcagaaagc
agtgtggagaagccgaacgacagggaggtgcccagcctgcccctaggactgacaggcgct
tttgaggacacttcatttgcttccttgtctaaccttgtcaatgaaaacactctgaaagct
atagaagaaatgggcttcaagcgcatgactgagatccaacataaaagtatcaggccactt
ctggaaggcagggatcttctggcagctgcgaaaacaggcagtggcaaaacgcttgctttc
ctcatccccgtgatcgagctcattgtcaagttgaagttcatgcctaggaatggaacagga
gtcctgattctctctcctaccagagaactggccatgcagactttcggcgttcttaaggaa
ctgatgacacaccatgttcacacgtatggactgatcatgggtggcagtaacaggtctgct
gaagcacagaagctcatcaatggcatcaacatcatcgtggccaccccaggccggctcctg
gaccacatgcagaatactccagggttcatgtacaagaacctccagtgtctggttattgat
gaggctgatcgtatcttggatgttgggtttgaagaagaattaaagcaaattattaaactt
ttgccagtccgcaggcaaaccatgctcttttctgccacacaaactcgaaaagttgaagac
ctggcaagaatttctctgaaaaaagagccattgtatgtgggtgtagatgacgataaagag
gttgccactgtggatgggcttgagcagggctatgtcgtgtgtccctctgagaagaggttc
cttctgctcttcacattccttaagaagaaccggaagaagaaagtgatggtcttcttttca
tcgtgtatgtctgtgaagtaccactatgagctactgaactacattgacctgcctgtcttg
gccatccatgggaagcaaaagcaaaataagcgaacaaccacgttcttccaattctgcaat
gcagattcggggatactgctgtgcacagatgtggcagccagagggctggacatccctgaa
gtggactggattgttcagtatgaccctcccgatgaccccaaggaatatattcatcgtgtg
ggtagaacagccagaggtctgaatggaagagggcatgccctgctcatcctgcgtcctgaa
gagttgggtttccttcgttacttgaagcaatccaaggttccattgaatcaatttgacttt
tcctggtctaaagtttctgatattcagtctcagctggaaaagctgatcgaaaagaactat
tttctccataagtccgcacaggaagcatacaagtcctacatacgagcatatgactcccac
tcgctcaagcagatcttcaatgtcaacaacttaaatttgcctcaggttgccctgtctttt
ggttttaaggtccctccttttgttgatctgaatgtgagcagccatgatggcaagcttaaa
aagagaggaggtggcggtggattcggctaccagaaatcaaagaaagcggagaagtccaag
atctttaaacacatcagcaagaagtcagcagaccgcaggcagttctctcactga
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