KEGG   Cricetulus griseus (Chinese hamster): 100759697
Entry
100759697         CDS       T02813                                 
Name
(RefSeq) THO complex subunit 3-like
  KO
K12880  THO complex subunit 3
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge03013  Nucleocytoplasmic transport
cge03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cge00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100759697
  09122 Translation
   03013 Nucleocytoplasmic transport
    100759697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cge03019]
    100759697
   03041 Spliceosome [BR:cge03041]
    100759697
Messenger RNA biogenesis [BR:cge03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100759697
Spliceosome [BR:cge03041]
 Complex C
  Other components
   EJC/TREX
    100759697
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100759697
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_EML_2 ANAPC4_WD40 WDR55 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_Aladin WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Tricorn_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st eIF2A Beta-prop_Vps41 RMC1_N WD40_MABP1-WDR62_1st Beta-prop_HPS5 B-prop_COPA_B_2nd NBCH_WD40 Beta-prop_NOL10_N PROPPIN Peptidase_S9_N TP_0598_N
Other DBs
NCBI-GeneID: 100759697
NCBI-ProteinID: XP_027289049
UniProt: A0A9J7K2U0
LinkDB
Position
X
AA seq 300 aa
MWDYYWGLSSLWVGWMPDWDPQCKVPRPQAALSRALEVAHVSGRDKSSGLGRRQSVISRH
ARGSPTATLEDVPRSLGEPQGRLGDSHLGAGENINIYWSPDGQTVAVGNKDDVVTFIDAK
TYRSKAEEQFKFEVNEISWNNDNNMFFLTNGNDFINILSYPKLKPVQSINAHPSNCICIK
FDPMGKYFATGSADALVSLWDVDGLVCVRCFSRLDWPVRTLSFSHNGKMLASASEDHFID
VAEVETEDKLWEVQRESLTFTVVWHPKRPLLAFACNDKDGKYDSSQETGTVKLFGLPNDS
NT seq 903 nt   +upstreamnt  +downstreamnt
atgtgggactactactggggcctcagcagtctctgggtgggctggatgccagattgggat
ccccagtgcaaagtccccaggcctcaggcagctctgagcagggcactggaagtcgctcat
gtctcgggaagagacaagagctctggtctcgggaggagacagagtgtgatcagcagacat
gctaggggatcaccgactgccaccctggaagatgttccaagaagtctgggggaacctcag
ggacgcttgggagattcccatctgggagccggggagaacattaatatctactggagtccc
gatgggcagactgttgctgtgggcaacaaggatgatgttgtgacttttattgatgccaag
acataccgttccaaagcggaagagcagttcaagtttgaggtcaatgaaatctcctggaat
aacgacaataacatgttcttcctgaccaatggcaacgattttatcaacattctcagctac
cccaaactaaagcctgtgcagtccatcaacgcccacccttctaactgcatctgtatcaag
tttgaccccatggggaagtattttgccacaggaagcgcagatgctttggttagcctctgg
gatgtcgatgggttagtgtgtgtgcggtgcttctctaggttggactggcctgtgaggacc
cttagttttagccacaatgggaaaatgctggcgtcggcctcagaggatcatttcattgac
gtagctgaagtagagacagaagacaagctgtgggaggtgcagcgtgagtccctgaccttc
accgtggtgtggcaccccaagaggcctctgctagcgtttgcctgtaatgacaaagatggc
aaatatgacagcagtcaggaaactgggactgtgaagctatttgggcttccgaatgactcc
tga

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