Cricetulus griseus (Chinese hamster): 100760981
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Entry
100760981 CDS
T02813
Symbol
Smg7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100760981 (Smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100760981 (Smg7)
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100760981 (Smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
100760981 (Smg7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
100760981
NCBI-ProteinID:
XP_027273167
UniProt:
A0A9J7JP33
LinkDB
All DBs
Position
5:38733647..38801577
Genome browser
AA seq
1209 aa
AA seq
DB search
MFLQIVIVGENVSFKSQMRTENLKSEEHLKSSNIRQAEVLKAEMTDSKLGPAEVWTSRQA
LQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFL
EAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQMHTSAIVKPQSSSCSYICQHCL
VHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAV
KFPFPAASTNLQKALSKALESRDELKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREK
LEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALF
MSFLGILCKCPLQNDSQESYNAYPLPAVKVSMDWLRLRPRIFQETVVDEKQYIWPWLISL
LNSFHPHEDDLSCTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRRIRQ
QRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSVIESLA
TDGSPGLKSVLSTGRNPNNSCDTGEKPVVTFKENIKPREVNREQGRSFPPKEVRRDCSKG
VTKDDAKKDSNKRRAETKRCTLGKLQETGKQSVAVQVKSQTELRKTPVSEARKTPVTQTP
SQANNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQS
TAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQPPLTSLPAQPTAQSTSQ
LQVQALAQQQQSPTKVIPALGKSPPHHSGFQQYQQADASKQLWNPPQVQGPLGKIMPVKQ
PYYLQTQDPIKLFEPSLQPPVIQQQPLEKKMKPFPMEPYNHNPSEVKVPEFYWDSSYSMA
DNRAVMAQQPNMDRRSKRSPGVFRPEQDPVPRMPFEDPKSSPLLPPDLLKSLAALEEEEE
LIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSLLSLTGFSVNQERYPNSS
MFNEVYGKNLTTSSKAELNPSVASQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSN
PSSLPSSPPTHNHNSAPFSNFGPIGTPDNRDRRPADRWKTDKPAMGGFGVDYLSTTSSSE
SSWHQATTPSGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQR
GQGAMNPPH
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgcagatagtcattgtgggagaaaacgtttcatttaagtcccagatgaggacc
gaaaacttgaaatcagaggagcatctgaaatcaagtaatattaggcaggcagaagtcctg
aaggctgaaatgacagattctaagctgggtccagctgaggtctggacgtccaggcaagct
ctgcaggacttgtaccagaaaatgctagttactgatctggaatatgctttagacaagaaa
gtagaacaggatctctggaatcatgcctttaagaatcagatcacaacactacaagggcaa
gcaaagaatcgagcaaacccaaatcggagtgaagtccaggcaaacctttctctattccta
gaggcagctagtggcttctatactcagttattacaggaactgtgtacggtgttcaatgta
gatttgccatgccgtgtgaagtcttcccaattgggaattattagcaataaacagatgcac
accagcgccatagtgaagccacagtctagctcctgttcctacatttgccagcactgcctc
gtccaccttggagacattgctcgatacagaaaccagaccagccaggcagagtcctactat
aggcatgcagctcagcttgttccctccaatggtcagccttacaatcagttggctatctta
gcttcttccaaaggagaccacctgaccacaattttctactactgcagaagcattgctgtg
aaattccctttcccagctgcctccactaatctacaaaaagcactttctaaagcactggaa
agccgggatgagttgaaaaccaagtggggtgtttctgacttcatcaaggcgtttattaaa
ttccacggtcatgtatacctgagtaagagtttggaaaagttgagtcctcttcgagagaag
ttggaagaacagtttaagaggctgctattccaaaaagctttcaactctcagcagttagtg
catgtcactgtcattaacctgtttcaacttcatcatcttcgtgacttcagcaatgaaaca
gagcagcatagttacagccaagatgaacaactatgctggacgcagttactagccctcttt
atgtcttttcttggcatcctgtgcaaatgtcccctccagaacgattctcaggagtcctac
aatgcctatcccctccctgcagtcaaggtctccatggactggctaagactccgacctcga
atctttcaggaaacagtagtggatgaaaaacagtacatttggccctggctaatttctctt
ttaaatagtttccatccccatgaagatgatctctcatgtactaatgccacacctcttcca
gaggagtttgaattacaaggattcttggctttaagaccttcttttaggaacttggatttt
tccaaaggccatcagggtattacaggagacaaagagggtcaacagagacgaatacgacag
cagcgtttgatctctataggaaaatggattgctgacaatcagccacggctgattcagtgt
gaaaacgaggtagggaaactgttatttatcacagaaattccagaattaatactagaagac
cccagtgaagccaaagagaatctcatcctacaagaaacatctgtgatagagtcactagct
acagatgggagcccaggactgaagtcagtgctgtctacgggccgaaatccaaacaacagc
tgtgacacaggagagaaaccagtggtcaccttcaaagagaacattaagccacgagaagtg
aacagagagcaaggaagaagctttcctcccaaagaggtgagaagggactgtagcaaaggt
gtaactaaggatgatgcaaagaaggacagcaacaagaggagagctgagaccaagagatgc
accttaggaaagttacaggaaacaggaaagcagagtgtggcagtgcaggtaaaatcccag
acagaactaagaaagactccagtgtctgaagccaggaaaacacctgtcactcaaactcca
agtcaagcgaataattctcagttcatccctattcatcaccctggagccttccctcctctt
cccagccgaccagggttcccgcccccaacatatgttatcccccctcctgtggcattttct
atgggctcaggttacaccttcccagctggtgtttctgtcccaggaacctttcttcagtct
acagctcactctccagcaggaaaccaggtgcaagctgggaaacagtcccacattccttac
agccagcaacggccctctggaccagggccaatgaaccagggacctcaacaatcacagcca
ccttctcagccacctcttacatctttaccagctcagccaacagcacagtctacaagccag
ttgcaggttcaagctctagctcagcaacagcaatcccctacaaaagtcataccagctttg
gggaaaagcccacctcaccactctggattccaacagtatcaacaggcagatgcctccaaa
cagctgtggaatccccctcaggttcaaggcccactagggaaaattatgcctgtgaaacag
ccctactaccttcagacccaagaccctataaaactgtttgagccgtcattgcagcctcct
gtaatacagcagcagcctctagagaaaaaaatgaagcctttccccatggagccatataac
cacaatccctcagaagtcaaggtcccagagttctactgggattcttcctacagcatggct
gataacagagcagtaatggcacagcaaccaaatatggaccgcaggagcaagcggtcacca
ggagtcttccgtccagagcaggaccctgtgcccaggatgccatttgaggaccccaagagc
tcccctctgcttcctccggacctgttaaagagtctggctgccttggaggaagaggaagag
ctgatcttttctaaccctcctgatctttacccagctctgctgggtcctctcgcctctctt
cctggacgaagcctctttaaatccttattggagaagccttcagagctcatgtcacactca
tcttctctcctgtccctcactggattctctgtcaatcaggagcgatatccaaacagcagt
atgttcaatgaagtgtatgggaagaacctgacaaccagctccaaggcagaactgaacccc
tcagttgcctcccaggaaacatcactgtactccctttttgaagggaccccttggtctcca
tcacttcctgccagttcagatcattcaacaccagccagccagtctcctcattcctctaac
ccaagcagcctgcccagttctcctccaacacataaccataattctgctcctttctctaat
tttggacccattgggactccagataacagggataggcggccggcagaccgatggaaaact
gataaaccagccatgggtggttttggcgttgattatctctcaacaacatcatcatctgag
agcagttggcatcaggctaccactccaagtggcacctggacaggccatggcccctccatg
gaggattcctctgctgtcctcatggaaagcctaaagtctatctggtccagttccatgatg
catcctggaccctccgctctggagcagttgttaatgcagcagaagcagaaacagcagcgg
ggacaaggtgccatgaaccctccacactga
DBGET
integrated database retrieval system