KEGG   Cricetulus griseus (Chinese hamster): 100761435
Entry
100761435         CDS       T02813                                 
Symbol
Kdm5b
Name
(RefSeq) lysine-specific demethylase 5B isoform X3
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
cge  Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:cge00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cge01009]
    100761435 (Kdm5b)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cge03036]
    100761435 (Kdm5b)
Enzymes [BR:cge01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     100761435 (Kdm5b)
Protein phosphatases and associated proteins [BR:cge01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100761435 (Kdm5b)
Chromosome and associated proteins [BR:cge03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100761435 (Kdm5b)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_UBR7-like PHD_2 PHD_Pygo zf-PHD-like RPEL
Other DBs
NCBI-GeneID: 100761435
NCBI-ProteinID: XP_027273346
UniProt: A0A9J7JP73
LinkDB
Position
5
AA seq 1540 aa
METATVLPPGPRPALPLGGPGPLGEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTG
ICKVRPPADWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKI
PHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILN
PYNLFLSGDSLRCLQKPNLTSDTKDKEYKPHDILQRQSVQPSETCPPARRAKRMRAEAMN
IKIEPEEATETRTHNLRRRMGCPTPKCENEKEMKINIKQEPIEKKDCMLETEREKPKSRS
KKTTNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQE
CSKPQEAFGFEQAARDYTLRTFGEMADSFKSDYFNMPVHMVPTELVEKEFWRLVSTIEED
VTVEYGADIASKEFGSGFPVRDGKIKISPEEEEYLDSGWNLNNMPVMEQSVLAHITADIC
GMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPE
LFVSQPDLLHQLVTIMNPNTLMTHDVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAV
NFCTVDWVPLGRQCVEHYRSLHRYCVFSHDEMICKMASKAGVLDVVVASTVQKDMAIMIE
DEKALRETVRKLGVIDSERMDFELLPDDERQCIKCKTTCFMSAISCSCKPGLLVCLHHVK
ELCSCPPHKYNLRYRYTLDDLYPMMNALKLRAESYNEWSLNVNEALEAKINKKKSLVSFK
ALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVN
ELRQFVTQLYALPCVLSQTPLLKDLLDRVEDFQQHSQKLLSEEMPSASQLQDLLDVSFEF
DVELPQLAEIRIRLEQARWLEEVQQACLDSSSLSLDDMRRLIDLGVGLAPYSAVEKAMAH
LQELLTVSEHWDDKAKSLLRARPRHSLSSLATAVKEMEEIPAYLPNGAVLKDSVQRARDW
LRDVDALQAGGRVPVLETLVELVARGRSIPVHLNSLPRLELLVAEVQAWKECASKTFLTE
NSPYSLLEVLCPRCDIGLLGLKRKQRKLKEPLPSGKKKSTKLESLSDLERALTESKETAS
AMATLGEARLREMEALQSLRLANEGKLLSSVQDVEMKVCLCQKTPATPMIQCELCRDAFH
TSCVAVPNISQSPRIWLCPHCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTV
NWQHRVQQLLSSGNLKFVQDQVGSGLFSRWQASAGQASETNKVSQPPGTTSFSLPEDCDN
RSSFSHSPGQSCVPLHGVSPEVNELLMEAQLLQVSLPEIQELYQTLLTKPNSAQQTDRSS
PVRASSEKNDCLRGKRDGVNSLERKLKRRPEREGLPSERWDRVKKMRTPQKKKIKLSHPK
DMNNFKLERERSYDLVRNAETHSLPSDTSYSEQEDSEDEDAVCPAVSCLQPEGDEVDWVQ
CDGSCNQWFHQVCVGVSPEMAEKEDYICVRCMAKDTPSRK
NT seq 4623 nt   +upstreamnt  +downstreamnt
atggagacggctaccgtgctgcccccaggcccgcgcccggctctgcccctcgggggcccg
ggcccgctgggcgagttcctgcctccccccgagtgtccggtcttcgagcccagctgggaa
gagttcgcggaccccttcgctttcatccacaagatccggcccatagccgagcagactggg
atctgtaaggtgcggccgccagcggattggcagccaccatttgcctgtgatgttgataag
cttcattttaccccccggatccagaggctaaatgaactggaggctcaaacacgtgtaaag
ttgaattttctggaccagattgcaaagtattgggagctacagggaagtactctgaagatt
ccccatgtagagcggaagatcttagacttgttccagcttaataagttagttgcagaagaa
ggtggttttgcagttgtttgcaaggatagaaaatggaccaaaattgccaccaagatgggt
tttgctcctgggaaagctgtgggatcacacatcaggggacattatgaacgaatcctcaat
ccatacaacttattcctctccggagacagtttgaggtgtcttcaaaagcctaacctgacc
tcagatacaaaggacaaggaatacaaaccccatgatattctccagaggcagtctgtacag
ccctcagaaacctgtcctccagctcgccgagcaaagcgcatgagagcagaggccatgaat
attaaaatagaaccagaagaggcaacagaaaccagaacacataatttgagacgccgaatg
ggttgtccaactccaaaatgtgaaaatgagaaagaaatgaaaattaacatcaagcaagaa
ccaattgagaagaaagactgcatgttagaaactgagagggaaaagcctaagagccgatct
aaaaaaaccaccaatgctgtggacctgtatgtttgcctcttatgtggcagtggcaatgat
gaagaccggctcctcctgtgtgatgggtgtgatgacagttaccatactttctgcttgatt
ccccccctccatgatgttcccaagggagactggaggtgtcctaagtgtttggctcaagaa
tgtagcaagccacaagaagcatttggatttgaacaagcagcaagggactatactcttcgt
acatttggggaaatggcagattcgtttaaatctgattacttcaacatgccagtccatatg
gttcctacagagctggtggagaaagagttttggcgactggtaagcactattgaagaagat
gtcacagtagagtatggagctgatattgcttcaaaggagttcggcagtggctttcctgta
cgtgatgggaaaatcaagatttcgcctgaggaagaggagtatcttgatagtggctggaat
ttgaacaatatgccagtgatggagcaatctgtccttgctcatattactgctgatatatgt
ggcatgaaactcccttggttgtatgtgggcatgtgcttttcttccttctgttggcatatt
gaagaccactggagctactcaatcaactacctacactggggtgagccaaaaacttggtat
ggagttccaggatatgctgctgagcagctagaaaatgtaatgaagaaactagctccagag
ctctttgtgtcccagccagatctgctccaccagcttgtgaccatcatgaaccccaatact
ctgatgactcatgatgtgcctgtttatcgaacaaatcaatgtgctggggagtttgtgatc
acctttccaagagcctatcacagtggtttcaaccaaggttttaattttgctgaggctgtt
aacttctgcactgttgattgggtgccattgggccgccagtgtgtggagcactatcgctcg
ctgcaccgttattgtgtcttttcccatgatgagatgatatgcaaaatggcttccaaggct
ggtgtgttggatgttgtagttgcttcaactgttcagaaagacatggccattatgattgag
gatgaaaaagctttaagggaaactgttcgtaaattgggagtaattgattcggaaagaatg
gattttgagctgttgccagatgatgagcggcagtgtataaaatgcaaaacaacatgcttc
atgtctgccatctcctgctcttgtaaacctggcctgcttgtttgcttacatcatgtaaaa
gaattgtgttcctgtccccctcataagtataacctgcggtatcgatacactctggatgat
ctctatccaatgatgaatgcgttgaagcttcgagcagagtcttacaatgaatggtcctta
aatgtgaatgaagctttggaagcaaagatcaacaagaagaaaagtcttgtcagctttaaa
gctttaattgaagaatcagaaatgaagaaattcccagacaatgatcttctgcgtcacctc
cgcttagtcacacaggatgcagaaaagtgtgcctctgttgcccaacaattgcttaatggc
aaaaggcagacaaggtatcgatctggcggaggcaagtctcagaatcagttgacggtgaat
gaactccgacagtttgtgactcaattgtatgctcttccatgtgtccttagtcaaacacca
ttgctaaaggatctcttggatcgtgtagaagatttccagcagcatagccagaaactactg
tctgaggaaatgcctagtgcttctcagctgcaggacttgctggatgtcagctttgaattt
gatgttgaacttccacaacttgctgagattcgtattcgcttagaacaggcccgttggcta
gaagaggtgcaacaagcttgcctagattccagttccctttcattggatgatatgagacga
ctcatagacttaggggtggggctggcgccatattcagcagtggagaaagctatggcccac
ctacaagaactgcttacagtgtcagagcactgggatgacaaagccaaaagtcttctcaga
gcaagaccacggcattctttgagtagccttgctacagcagtaaaggaaatggaagagatt
cctgcctatctgcccaatggtgcagttctgaaagattcagtgcagagagccagagactgg
cttcgagatgtagatgcactgcaggcaggaggacgtgtgccagtgttagaaacgctcgtc
gaacttgttgcaaggggtcgatctatcccagtacacctgaattctttaccaagattggaa
ttactagtagctgaagttcaagcatggaaagaatgtgcttctaaaacattcttgactgag
aattcaccatattctttgttagaggtgctttgtccgaggtgtgatattggccttttggga
ttgaaaaggaagcagagaaagttgaaggagcccttgccaagtgggaagaagaaaagcacc
aaattagagagtctgagtgacctggagagggccttaaccgagagcaaggagactgcttca
gctatggcaactcttggggaagctcgcctaagagagatggaagctttgcagtctctcaga
cttgccaatgaagggaaattgctgtcatctgtccaagatgtagaaatgaaagtctgtctg
tgccagaagactccagccactcccatgatccagtgtgaactctgcagagatgctttccac
actagttgtgtggcagtacctaatatttcacaaagcccccgaatctggctttgtcctcat
tgtcgaaggtcagagaagcctccattagagaaaattctgcccctgctagcctccctacag
cgtatacgagttcgtcttcctgagggggatgcacttcgctatatgattgaaagaaccgtg
aactggcaacatagagttcagcagctactttcttcagggaatctaaaatttgtgcaagac
caagtgggctctggactgtttagcagatggcaagcctcagcaggacaggcatcagagaca
aacaaggtgtctcaacctcctggtaccacatccttttcattgcctgaggactgtgacaac
agaagctcgttttcacattctcccggacagagttgtgttcccctccatggtgtgagtcca
gaagtgaatgaattgttaatggaagcccagttgctccaggtatcccttcctgaaattcag
gaactttatcagactttacttacaaagccaaactctgctcagcaaactgaccgaagctca
cctgttagagccagtagtgaaaagaatgattgccttcgagggaaacgagatggagtcaac
agtcttgaaagaaaattgaagagacgcccagaaagagaaggccttcccagtgaacggtgg
gatcgagttaaaaaaatgcggaccccccaaaagaagaaaatcaaattgagtcaccccaag
gacatgaacaatttcaaattagaaagagagcgtagctatgacttagtccgtaatgctgaa
acacattcgctaccctcagacacgtcctactcggagcaggaggactctgaggatgaagat
gccgtctgtccagctgtgagctgcctgcagccagaaggagatgaggtggactgggtccag
tgtgatggcagctgcaatcagtggtttcaccaggtctgtgttggtgtctctccagagatg
gcagagaaggaagactacatctgtgtgcgctgcatggcaaaggacacaccaagccgaaag
taa

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