Cricetulus griseus (Chinese hamster): 100761907
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Entry
100761907 CDS
T02813
Symbol
Prdm11
Name
(RefSeq) PR domain-containing protein 11 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cge03000
]
100761907 (Prdm11)
Transcription factors [BR:
cge03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100761907 (Prdm11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SET
Dimer_Tnp_hAT
Zn_ribbon_PRDM4
FOG1-like_PR
DUF7822
DUF4954
Motif
Other DBs
NCBI-GeneID:
100761907
NCBI-ProteinID:
XP_027278245
UniProt:
A0A9J7JSI9
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Position
6:83734025..83775998
Genome browser
AA seq
1177 aa
AA seq
DB search
MTENMKECLAHTKAAVGDMVTVVKTEVCSPLRDQEYGQPCSRRPEPSSMEVEPKKLKGKR
DLIVTKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPQGMEVV
KEAGGESDVRCINEVVPKGHIFGPYEGQISTQDKSAGFFSWLIVDKNNRYKSIDGSDETK
ANWMRYVVISREEREQNLLAFQHSERIYFRACRDIRPGEWLRVWYSEDYMKRLHSMSQET
IHRNLTRGEKRLQREKAEQALDNPEDIRCPSQFPVLKQGRSPYKRSFDEGDIHPQAKKKK
IDLIFKDVLEASLESSNVEARQLALSTSLVIRKVPKYQDDDYGQSAAALTQGIQNICRTQ
GEGNWKVPQRVAKELGPLEDEEEEPASFKADSPAEASLASDPHELPTTSFCPNCIRLKKK
VRELQAELDMLKSGKLPEPPILPPQVLELPEFSDPAASESMVSGPAIMEDDDQEVDSADE
SVSNDVMTATDESTKMSSATGRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCRQYTVQSS
RTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCRNMTLLFNTAYHLA
LEGRPYLDFRPLAELLRKCELKVVDQYMNEGDCQILIHHIARALREDLVERIRQSPCLSI
ILDGQSDDLLADTVAVYVQYTSSDGPPATEFLSLQELGFSSTESYLQALDRAFTGLGIRL
QDEKPTVGLGVDGANITASLRASMFMTIRKTLPWLLCLPFMVHRPHLEILDAISGKELPC
LEELENNLKQLLSFYRYSPRLMCELRSTASTLCEETEFLGDIRAIRWIIGEQNVLNALIK
DYLEVVAHLKDVSSQTQRADASAIALALLQFLMDYQSIKLIYFLLDVIAVLSRLAYIFQG
EYLLVSQVDNKIEEAIQEISRLADSPGEYLQEFEENFRESFNGIAVKNLRVAEAKFQSIR
EKICQKTQVILAQRFDSRSRVFVKACQVFDLAAWPRNSEELLSFGKEDMVQIFDHLEAIP
TFSRDVCREGVDPRGSLLMEWRDLKADYYTKNGFKDLISHICKYKQRFPLLNKIIQVLKV
LPTSTACCEKGRSALQRVRKNHRSRLTLEQLSDLLTIAVNGPPIANFDAKRALDSWFEEK
SGNSYTLSAEVLSRMSALEQKPMLQAVDHGSEFYPDM
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaacatgaaggagtgcttggcccacaccaaagcggctgtaggggacatggtg
acagtagtgaagacagaggtctgctcaccactccgggaccaggagtatggccagccctgc
tctaggagaccagagccctcctccatggaagttgaacccaagaagctgaagggaaagcgt
gacctcatcgtgacaaaaagcttccagcaagtggacttctggttctgtgagtcctgccaa
gagtacttcgtggatgagtgcccgaaccatggtccccccgtgtttgtgtctgacacgcca
gtgcctgtgggcatcccagatcgggcagctctcaccatcccacagggcatggaggtggta
aaggaagctggtggggagagcgatgtgcggtgtataaatgaggtcgtccccaagggtcac
atctttggcccttatgaggggcagatctctacccaggacaagtcagctggcttcttctca
tggttgattgtggacaagaacaaccgctacaagtccatagatgggtcggatgagaccaag
gccaactggatgaggtacgtggtcatttcccgggaggagagggagcagaacctcctggca
ttccagcacagcgagcgcatctacttccgggcatgccgagacatccggcctggagaatgg
ctgagggtctggtacagtgaagactacatgaagcgtctgcatagcatgtcccaggaaacc
atccaccgcaacctgacccgtggagagaagaggttgcagagggagaaggctgagcaagcc
ctggataatccagaagacataaggtgtccttctcagttccctgtgttgaaacagggcaga
agtccctacaagcgcagctttgatgaaggggacatacaccctcaggccaagaagaagaaa
atagacctcatcttcaaggatgtactagaagcctcattggagtcctctaatgtggaagcc
cgccagctggcactgagcacctctctggtcatccggaaagtccccaagtaccaggatgat
gactatggtcagagtgcagctgccttgacacaaggcatacagaatatctgccggacccag
ggggaagggaactggaaggtgccccaaagggtggccaaagaactaggcccgttggaggat
gaagaggaggagcctgcatcattcaaggctgacagtcctgcggaagcctctctggcatct
gaccctcatgagctacccaccacctccttttgccctaattgcattcgcctgaagaagaaa
gtacgggaattgcaggcagagctagatatgcttaagtctggaaagctacctgagcccccc
attctgccaccgcaggtactggagctccctgagttctcagatcctgcagcctcagagagc
atggtctctggccctgccatcatggaggatgatgaccaggaagtggattctgcagatgaa
tctgtgtccaatgatgtgatgacagcaaccgatgaatccaccaagatgtcctctgccact
ggacgccgcatccggcgctttaagcaggagtggctgaagaaattctggttcctacgatat
tccccgaccctcaacgagatgtggtgccatgtgtgccgccagtacacggtacagtcctcc
cgcacttctgccttcatcatcggctccaagcagtttaagatccacaccatcaagctgcac
agtcagagcaacctgcataagaagtgcctgcagctgtacaagctgcgcatgcacccagag
aagactgaggagatgtgccgaaacatgactctgctcttcaacactgcctaccacctggca
ctggagggcaggccctacctggacttccggccgctggcagagctgctgcggaagtgtgag
ctcaaggtggtagaccagtacatgaatgagggggactgccagatcctcatccatcacatc
gcccgagcactgagggaggacctggtggaacgcatccgtcagtcaccctgcctcagcatc
attctggatgggcagagtgacgaccttctggctgacacagtggctgtctatgtgcagtat
accagcagtgatgggcccccagccacagaattcctatccctgcaggagctaggcttctcc
agcacagaaagctatctccaggcgcttgaccgggcctttactggtctgggcatccgctta
caggacgagaaaccaactgtcggcctgggagtggatggggccaacatcaccgccagcttg
cgtgccagcatgttcatgaccatccgcaagacactgccctggctgctgtgcttgcctttc
atggtgcaccggccccaccttgagatcctggatgccatcagtgggaaggagctgccctgc
ctggaagagctggaaaacaacctgaagcagctactcagtttctaccgctactcaccgcgt
ctcatgtgtgagctgcgctccacagcctccaccctgtgcgaggagactgaattcctgggg
gacatccgtgccattaggtggatcattggtgagcagaatgtcctgaacgccctcatcaag
gattacctggaagtggtggcccacctcaaggatgtcagcagccagacacagagggcagat
gcttcagccattgccctggccctgctgcagttcctcatggactatcagtccatcaagctc
atctacttcctgttggacgtgattgccgtgctctcacgcctggcctacatcttccaggga
gagtatctcctggtgtcgcaggtggacaacaagattgaggaggccatccaagagatcagc
cggcttgcagactccccgggggagtatctgcaggaattcgaggagaatttccgagagagc
ttcaatgggattgccgtgaagaacctcagggtggctgaggctaagttccagtccatcagg
gagaagatctgccagaagacacaggtcattctggcacaaaggtttgattcccgaagccgg
gtcttcgtgaaggcctgccaagtgttcgacctagccgcatggcccaggaacagcgaagag
ctcctcagctttggcaaggaagacatggttcagatctttgatcacctagaagccattcct
accttctcccgggatgtgtgccgtgaaggggtggatccccgggggagcctgctgatggag
tggagagacctcaaggctgattactacaccaaaaatggcttcaaagacctcatcagtcac
atctgcaagtacaagcaaaggtttccgctcttgaacaagatcattcaggtccttaaagtc
ctccccacctccactgcctgctgcgagaaaggccgcagtgccctccagcgggtccgcaaa
aaccaccgctcccgcctgaccctggagcagctcagtgacctgttgacaattgctgtgaat
ggaccacccatcgccaactttgatgccaagcgagccctggacagctggtttgaggagaag
tctggcaatagctacacactgtcagccgaggtcctcagtaggatgtctgccctggagcag
aagcccatgctgcaggctgtggaccatggctctgagttctatccagacatgtag
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