Cricetulus griseus (Chinese hamster): 100761910
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Entry
100761910 CDS
T02813
Symbol
Topbp1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X2
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100761910 (Topbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cge03032
]
100761910 (Topbp1)
03400 DNA repair and recombination proteins [BR:
cge03400
]
100761910 (Topbp1)
DNA replication proteins [BR:
cge03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
100761910 (Topbp1)
DNA repair and recombination proteins [BR:
cge03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
100761910 (Topbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
100761910
NCBI-ProteinID:
XP_027270135
UniProt:
G3GZG7
LinkDB
All DBs
Position
4:211544407..211588211
Genome browser
AA seq
1517 aa
AA seq
DB search
MSRNDQEPFFVKFLKSSDNSECFYKALESIKELQSEDYLQIISEEEALKIKENDKSLYIC
DKFSGAVFDHLKQLGCRIVGPQVVTFCMHHQQCVPRAEYPVYNMIMSDITISCTSLDKDK
REEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
ENKITRYTDINMEDFKCPVFLGCIICVTGLNGIHRKTVQQLTAKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTLQWFHDSIEKGFCQDESIYKAEARAEIKTVPDTSTPT
AQSNAAAESRTLADVSHISNINGSCINETMFTSTTSKLECTLENLENLDISMFQAPEDLL
DGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYEDDLKQFWNKSSHRP
HVVGAKWLLECFSKGYMLPEEPYIHTNYQPTGIPVSDQPENQTTVLEKNSTFSKKDFTPN
EKLQQADEDLLSQYVNNDSTVVEAKPSASIELEVGPCSGFTQVEPCEESTHISVQEEDQS
SVSHCLLDGSAVPEEGLFSQKSFLVLGFSIENECNIVNIIREHAGKIVSLPSRIVADFAV
VPLLGCEVEATVGEVVTNTWLVTCIDYQTLVDPKSNPLFTPVSVMSGMTPLKDCVISFSQ
CVGAERDSLVFLANHLGASVQEFFVRKSSAKKGMLASTHLIVKEPTGSKYEAAKKWSLPA
VTISWLLETARMGKRADERHFLVDSAPKQEQVLETKLPNGVNPNPDSPAHPDTHLDLHRK
VAITPLDMNRFQSKAFHAVISQHCKQGSVSSAVGQPLKREPSLHLDTPSKFLSKDKLFKP
SFDVTDALAALETPRAATQKRKVSSPLSEVIVRNLKVALANSSRNTSTLSASPQLKGAHL
EEEEAPKPLDRVVVCVSKKLSKKQSELNGVAASLGAEYRWSFDESVTHFIYQGRANDSNR
EYKSAKERGVHIVSEHWLLECAQEYKHLPESLYPHTYNPKMSLDISTVQDGWLSNSRVSS
AVPASTDDEPDHLSVEDDETNSMVTNSKESALLNGNGRNDCKGALTQTLEMRENFQKQLQ
EIMSATCIVKMPAQRNCLSRSSCNSASSTPDSARSARSGRSRVLEALRQSRQIVPDINTE
PSQNEQIIWDDPTAREERARLASNLQWPSYPTQYSELQVDIKKLDDSPSLEPVYHSEIAE
QALCVTEAPELPISDEAETPAADKHPIPVPQPPSIAFPLAKPPAAPHPLDKIEKMEKSRE
KLKKQYVFQMSSLNSQERVDYCHLIKKLGGSVIEKQCSDPNCTHMVVGYPLRNEKYLASM
AAGKWVLHRSYLEACRTAGCFVQEEDYEWGSSAILDALTDVTEHQQKLALAAMRWRKRIQ
QRQESGIVEGAFSGWKVILRVDRPREAGFKRLLLAGGAKVLPGQPVPLFNEATHLFCDFN
KLKPDDCRVFISEAAAQNMACLKTEYIADYLMLESPPCADNYRLSEAAFLQNKESGPGLS
QKRRAPAENIIKRPRVR
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgaccaagaaccgttttttgtgaagtttttaaagtcttcagacaattca
gaatgtttttataaagctcttgagtcaataaaagaattacaatcagaagactatcttcag
attatttcagaggaggaagcattgaagataaaggagaatgacaaatcactttatatctgt
gacaaattcagtggtgctgtttttgatcaccttaaacagcttggctgcagaattgttggt
cctcaagtagtcacgttttgtatgcaccaccagcagtgcgtcccaagagctgagtatcca
gtttacaatatgattatgtctgatataactatatcttgtacaagcctggataaagacaaa
agggaagaagtccataaatatgtacaaatgatgggtggacgagtatacagagacctaaat
gtatcagtcactcaccttattgcaggggaagttgggagcaaaaaatatctagttgctgct
aatctgaagaaacctattttgcttccttcttggataaaaacactttgggagaagtcacaa
gagaacaaaataaccagatacactgatataaacatggaagactttaaatgtcctgttttt
cttggttgcattatctgtgtgactggcttaaatggtatacacagaaaaacagttcagcaa
ctcacagctaagcatggaggccagtacatgggacagctgaagatgaatgaatgtacacac
ctcattgtccaagaaccaaaaggacaaaaatatgaatgtgccaagagatggaatgttcat
tgtgtgaccctgcagtggtttcatgacagtattgagaaaggcttttgtcaggatgaatct
atatacaaggctgaagccagagcagaaataaagacggtgcctgatacttcaactcccact
gctcagagcaatgcagcagctgaaagtcgcactcttgcagatgtcagccatatatccaac
ataaatggcagctgtataaatgaaacaatgttcacttcaactactagcaaacttgaatgt
actcttgaaaacctagaaaatctggacatcagtatgtttcaagcacctgaggatttgcta
gatggctgtcggatatatctttgtggttttagtggcagaaagctagataaacttagaagg
cttattaacagtggcggtggagttcgatttaatcaacttaatgaagatgtaactcatgta
attgtgggagattatgaggatgacctgaagcagttttggaacaaatcatcccacaggcct
catgtagtgggagcaaagtggttgctggagtgttttagtaaaggatatatgctccctgaa
gagccatatatccacactaactaccagccaactggaattccagtttcagatcagcctgaa
aaccagacaactgtcttggaaaagaacagcacattctctaagaaagattttactcctaat
gagaagctccagcaagctgatgaggatctgctctctcagtatgtaaacaatgactccaca
gtagtggaagctaagccgtctgcatctatagagcttgaagttgggccttgcagtggtttt
actcaagttgagccctgtgaagagtccactcacatttctgtgcaagaggaagaccagtct
tcagtcagccattgcctccttgatggttctgcagttcctgaggaaggcttatttagccaa
aagagcttccttgtgttgggttttagtattgaaaatgaatgtaatattgtaaacatcata
agagaacatgctggaaagattgtgtcccttcctagcagaattgttgctgactttgctgtg
gttccgctgctcgggtgtgaagtagaggcaactgtgggagaagttgttacaaatacatgg
ctggttacgtgtatagattaccagacactagttgatcccaagtccaatcccctcttcaca
ccagtgtcagtaatgtcgggaatgactcctttaaaggactgtgttatttccttcagtcag
tgtgttggagcagagagagattccttggtattcttggcaaatcatcttggagcaagtgtt
caagaattctttgttcgcaaatccagtgcaaagaaaggcatgcttgcaagtacacatctt
atagtgaaagaaccgactggttctaaatatgaagctgcaaagaagtggagtttgccagca
gtcactatttcatggctcttagaaactgctagaatgggaaagagagcagatgaacgccat
tttctggttgacagtgcacctaaacaagaacaagtattagaaactaagctaccaaatgga
gtgaatccaaatcccgactctccagcacatcctgacacacatctggacctgcacagaaaa
gtggctattacacctttggacatgaaccgctttcagagtaaagctttccatgctgtcata
tcacagcactgtaagcagggttcagtctcttcagcagtaggacagccacttaagagggag
ccctccttacacctggacacaccatcaaagtttctgtccaaggacaaacttttcaagcca
tcttttgatgtgacggatgcacttgcagccttggaaaccccaagagctgccacccagaag
aggaaagtgagctcaccactctctgaagtcatcgtcagaaatttgaaagttgctttggca
aacagttcccgaaacaccagtactctttctgccagccctcagctgaagggtgcccatttg
gaagaggaagaggctccgaaaccacttgacagagttgtggtgtgtgtgagtaaaaagctc
agtaagaagcagagtgaattaaatggggtcgcagcctcactgggagcagagtacaggtgg
agttttgatgagtcagtgactcatttcatttatcagggtcgggcaaatgatagtaatcga
gaatataaatctgcaaaagaaagaggggtgcatattgtttctgagcattggcttttagag
tgtgctcaagagtataagcatcttcctgaatctctctatccacacacttacaatcctaaa
atgagcctggacatcagtacagtgcaagatggctggctctctaatagccgggtatcctcc
gcagttcctgcatctacagacgatgagccagatcatttgtctgtagaagatgatgagaca
aacagcatggtcacgaatagcaaagaatcagcactattgaatgggaatggaagaaatgac
tgcaaaggagctctaacacagaccttggagatgagagaaaatttccagaagcaattgcaa
gagatcatgtcagcaacctgcattgtgaagatgccggcacagaggaattgcctgtcaaga
agcagttgcaacagtgcttcttcaactcctgacagtgcacgctctgctcggagtggacga
agccgagtcctggaggcactcaggcagtctcgacagatagtgcctgatatcaacacagag
ccctcccagaacgagcagatcatttgggatgacccgacagcaagggaggagagagcaagg
ctcgccagcaacttgcagtggcctagctaccccacacagtattctgagcttcaggttgac
attaaaaaactggatgattctccttctctagagcctgtgtaccattcagaaattgctgag
caggccttgtgtgtgactgaagccccagaactcccaatctctgatgaagcagaaactcca
gcagcggataagcatccaatccctgtgcctcaacctcccagcattgctttccccttggcc
aagccacctgcagctccacatcctctggacaagattgaaaaaatggagaagagtcgtgaa
aaacttaaaaaacagtatgtattccagatgtcatctctgaattctcaagagcgggttgat
tactgtcacctgattaagaaactaggtgggtcggtgattgagaagcagtgctcagacccc
aactgcacacacatggttgtggggtacccattgcgcaatgagaagtacttagcctccatg
gcagctggcaagtgggtgcttcatcgttcctacctggaagcttgcaggaccgctgggtgc
tttgtgcaggaagaagactatgagtggggaagtagtgccatactggatgctctcactgat
gtcactgaacaccagcagaaactagcacttgcggcaatgaggtggaggaaaagaatccag
caaaggcaagagtcaggcattgttgagggagcatttagtggctggaaggttattttacgc
gttgatcggccccgagaagctggattcaagcgccttcttctggcaggcggagcaaaggta
ttacctggtcaaccagtacctttatttaatgaggctacacatcttttttgtgacttcaat
aaactgaaacctgatgactgcagagttttcatatcagaggctgctgcccagaacatggcc
tgcttgaaaacagaatatatcgctgattatctcatgctggaatcgcctccttgtgcggat
aattaccgtctctcagaagctgctttcctccagaataaagaatctgggcctggattatct
cagaagaggagagctcctgcagagaacatcatcaaacggcctcgagtgcgctag
DBGET
integrated database retrieval system
